vOTU vOTU-000944

vOTU: vOTU-000944

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-000944
Number of genomes	13
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-00371 → vSUBGEN-21582 → vOTU-000944
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1358146
Biosample ID	SAMN02334060
Genome length (bp)	42,324 bps
CheckV completeness	100.00% (Complete)
CDS count	68
CDS density	92.10%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	756	Host agreement	98.81
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1358146_4	phrog_16490	101.6	1.4e-37	N/A	unknown function
eggNOG-mapper	UHGV-1358146_4	1408437.JNJN01000043_gene803	177.0	0	N/A	N/A
eggNOG-mapper	UHGV-1358146_5	658655.HMPREF0988_00916	120.0	2.13e-33	N/A	N/A
eggNOG-mapper	UHGV-1358146_6	1408437.JNJN01000043_gene801	100.0	2.05e-23	N/A	N/A
KOfam	UHGV-1358146_7	K14059	209.0	0	int; integrase	N/A
PHROG	UHGV-1358146_7	phrog_1	209.0	0	integrase	integration and excision
UniRef90	UHGV-1358146_7	UniRef90_A0A367GI93	250.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1358146_7	1507.HMPREF0262_00307	180.0	0	Phage integrase family	N/A
Pfam	UHGV-1358146_7	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-1358146_7	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1358146_7	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1358146_7	PF00589,PF13102,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_8	phrog_1373	40.7	0.00000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-1358146_8	UniRef90_A0A2A7B6N3	355.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1358146_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1358146_8	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_11	phrog_888	139.2	2.89999e-41	N/A	unknown function
UniRef90	UHGV-1358146_11	UniRef90_A0A6N7TMA2	318.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-1358146_11	1415774.U728_165	88.6	3.11e-18	Short C-terminal domain	N/A
Pfam	UHGV-1358146_11	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-1358146_11	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-1358146_11	PF15947,PF14471	N/A	N/A	N/A	N/A
COG	UHGV-1358146_12	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-1358146_12	PF06776,COG5342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1358146_15	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358146_16	UniRef90_A0A2A7AM72	189.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1358146_16	1378168.N510_01712	62.4	0.000000000395	N/A	N/A
structural_annotation	UHGV-1358146_16	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358146_17	UniRef90_UPI000BEF0F65	91.3	5.24e-23	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-1358146_17	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358146_23	UniRef90_A0A098GES5	129.0	1.92e-36	Putative phage associated protein	N/A
structural_annotation	UHGV-1358146_23	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
COG	UHGV-1358146_26	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1358146_26	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_27	phrog_72	52.5	0.0000000000000088	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1358146_27	411471.SUBVAR_05829	140.0	9.11e-40	N/A	N/A
structural_annotation	UHGV-1358146_27	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_29	phrog_7566	79.9	2.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-1358146_29	411471.SUBVAR_05830	104.0	6.43e-28	N/A	N/A
KOfam	UHGV-1358146_30	K03111	138.1	9.99995e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1358146_30	phrog_44	140.3	1.19993e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358146_30	UniRef90_A0A2A7B6R5	300.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1358146_30	748224.HMPREF9436_00638	207.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1358146_30	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1358146_30	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1358146_30	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1358146_30	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1358146_30	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_31	phrog_6969	58.7	8.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-1358146_31	1232446.BAIE02000002_gene816	65.5	0.000000000923	N/A	N/A
Pfam	UHGV-1358146_31	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-1358146_31	PF04182,MF_01819,TIGR04176,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-1358146_32	K03496	214.1	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1358146_32	phrog_164	152.2	2.8026e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358146_32	UniRef90_A0A2A7B6H3	506.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-1358146_32	411471.SUBVAR_05839	223.0	0	AAA domain	N/A
Pfam	UHGV-1358146_32	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1358146_32	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1358146_32	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-1358146_33	K03497	83.8	3.7e-24	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1358146_33	phrog_4715	118.3	6.3e-35	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358146_33	UniRef90_A0A2A7B6Q0	600.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1358146_33	411471.SUBVAR_05842	177.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1358146_33	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1358146_33	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1358146_33	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_34	phrog_757	175.1	0	DNA methyltransferase	other
UniRef90	UHGV-1358146_34	UniRef90_A0A3E2U1Y9	351.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1358146_34	748224.HMPREF9436_03069	279.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1358146_34	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1358146_34	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1358146_35	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_38	phrog_56	103.3	8.3e-32	DNA methyltransferase	other
UniRef90	UHGV-1358146_38	UniRef90_UPI001C01192B	369.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-1358146_38	1236504.HMPREF2132_01695	164.0	3.08286e-44	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1358146_38	MTase_II_00075	88.0	3.8e-40	Type II methyltransferase	RM
Pfam	UHGV-1358146_38	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-1358146_38	NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_39	phrog_119	61.5	1.2e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358146_39	UniRef90_A0A2A7B6I3	244.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1358146_39	610130.Closa_0739	114.0	3.32e-31	HNH nucleases	N/A
Pfam	UHGV-1358146_39	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1358146_39	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1358146_40	phrog_13845	64.8	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1358146_40	508419.F8J158_9CAUD	77.4	1.07e-16	N/A	N/A
Pfam	UHGV-1358146_40	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1358146_40	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_41	phrog_9	245.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1358146_41	UniRef90_A0A2A7ALT4	1056.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1358146_41	610130.Closa_0741	624.0	0	Phage Terminase	N/A
Pfam	UHGV-1358146_41	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1358146_41	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1358146_41	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_42	phrog_12	115.8	2.7e-34	portal protein	head and packaging
UniRef90	UHGV-1358146_42	UniRef90_A0A2A7B6S8	827.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1358146_42	349161.Dred_2606	278.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1358146_42	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1358146_42	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1358146_42	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1358146_42	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1358146_43	K01358	91.8	1e-26	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1358146_43	phrog_94	135.3	7.1e-40	head maturation protease	head and packaging
UniRef90	UHGV-1358146_43	UniRef90_UPI001C10F40E	164.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1358146_43	1121866.AUGK01000006_gene879	140.0	4.63e-38	Clp protease	N/A
Pfam	UHGV-1358146_43	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1358146_43	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1358146_43	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_44	phrog_10	139.4	1.6e-41	major head protein	head and packaging
UniRef90	UHGV-1358146_44	UniRef90_A0A2A7B712	931.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1358146_44	1235792.C808_00086	459.0	0	Phage capsid family	N/A
Pfam	UHGV-1358146_44	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-1358146_44	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1358146_44	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1358146_44	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1358146_44	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_45	phrog_749	54.9	0.0000000000000014	N/A	unknown function
UniRef90	UHGV-1358146_45	UniRef90_UPI0016630012	64.7	0.000000000026	phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1358146_45	349161.Dred_2603	89.0	1.28e-21	N/A	N/A
PHROG	UHGV-1358146_46	phrog_19734	90.7	1.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1358146_46	349161.Dred_2602	76.3	4.04e-16	N/A	N/A
structural_annotation	UHGV-1358146_46	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1358146_47	PF05657,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358146_48	UniRef90_A0A1C6FG30	108.0	1.12e-26	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1358146_48	1235798.C817_04589	88.2	9.66e-20	N/A	N/A
structural_annotation	UHGV-1358146_48	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_49	phrog_88	100.3	2e-29	major tail protein	tail
UniRef90	UHGV-1358146_49	UniRef90_UPI0018771F27	130.0	1.64e-34	phage tail protein	N/A
eggNOG-mapper	UHGV-1358146_49	349161.Dred_2600	66.2	0.000000000232	N/A	N/A
NCBIFam	UHGV-1358146_49	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1358146_49	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_52	phrog_9959	82.6	2.6e-24	tail length tape measure protein	tail
UniRef90	UHGV-1358146_52	UniRef90_A0A2A7B6K1	1415.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1358146_52	596328.HMPREF0578_1241	155.0	1.01e-35	phage tail tape measure protein	N/A
Pfam	UHGV-1358146_52	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1358146_52	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1358146_52	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1358146_52	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_53	phrog_33	87.2	3.3e-25	distal tail protein Dit	tail
UniRef90	UHGV-1358146_53	UniRef90_A0A173Z1X4	145.0	2.46e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-1358146_53	1123315.AUIP01000014_gene1961	94.4	1.04e-20	tail component	N/A
COG	UHGV-1358146_53	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1358146_53	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_54	phrog_1067	193.1	0	minor head protein	head and packaging
UniRef90	UHGV-1358146_54	UniRef90_A0A2A7AM44	787.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1358146_54	1123263.AUKY01000068_gene489	194.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1358146_54	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1358146_54	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1358146_54	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1358146_54	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
KOfam	UHGV-1358146_57	K07273	161.6	0	acm; lysozyme	N/A
PHROG	UHGV-1358146_57	phrog_291	135.6	4.6e-40	endolysin	lysis
UniRef90	UHGV-1358146_57	UniRef90_UPI001D0EE7D8	258.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1358146_57	748224.HMPREF9436_00154	246.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1358146_57	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1358146_57	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1358146_57	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1358146_58	phrog_1863	75.5	4.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1358146_58	748224.HMPREF9436_00408	106.0	1.91e-29	N/A	N/A
PHROG	UHGV-1358146_59	phrog_263	86.7	1.6e-25	holin	lysis
UniRef90	UHGV-1358146_59	UniRef90_A0A329UCA4	107.0	7.4e-29	Phage holin	N/A
eggNOG-mapper	UHGV-1358146_59	1121344.JHZO01000003_gene952	98.6	5.56e-26	SPP1 phage holin	N/A
Pfam	UHGV-1358146_59	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-1358146_59	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1358146_59	PF04688,TIGR01592	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1358146_60	411483.FAEPRAA2165_00757	162.0	0	N/A	N/A
PHROG	UHGV-1358146_61	phrog_38190	103.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1358146_61	665956.HMPREF1032_02936	107.0	1.97e-26	N/A	N/A
PHROG	UHGV-1358146_63	phrog_24267	85.9	4.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1358146_63	1042156.CXIVA_07170	114.0	3.6e-27	tail collar domain protein	N/A
COG	UHGV-1358146_63	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1358146_63	COG4675	N/A	N/A	N/A	N/A
NCBIFam	UHGV-1358146_65	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-1358146_65	NF040910	N/A	N/A	N/A	N/A
COG	UHGV-1358146_66	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1358146_67	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1358146	Yes	42,324	54	100	1
UHGV-0321140	No	42,270	54	100	1
UHGV-0289523	No	42,269	54	100	1
UHGV-0378701	No	42,269	54	100	1
UHGV-0110413	No	39,534	53	100	1
UHGV-1361737	No	39,534	53	100	1
UHGV-0138328	No	38,528	53	100	1
UHGV-1367764	No	38,528	53	100	1
UHGV-0139353	No	42,416	54	100	1
UHGV-0313411	No	40,160	53	99	1
UHGV-0039975	No	37,237	53	92	1
UHGV-1418934	No	34,092	54	84	1
UHGV-0213447	No	22,514	54	56	1