vOTU vOTU-001101

vOTU: vOTU-001101

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-001101
Number of genomes	12
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00153 → vSUBFAM-07841 → vGENUS-21793 → vSUBGEN-43347 → vOTU-001101
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → UBA1242
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0173823
Biosample ID	SAMN09781730
Genome length (bp)	41,366 bps
CheckV completeness	100.00% (Complete)
CDS count	49
CDS density	96.89%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → UBA1242	Total connections	3	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0173823_1	K00986	143.2	2.40042e-42	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0173823_1	phrog_1423	308.4	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0173823_1	UniRef90_UPI0018DD683A	338.0	0	RNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0173823_1	1031288.AXAA01000043_gene1778	338.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0173823_1	icity0040	138.0	1.50001e-40	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0173823_1	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0173823_1	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0173823_1	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
Pfam	UHGV-0173823_3	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
PHROG	UHGV-0173823_8	phrog_22978	186.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0173823_8	1410650.JHWL01000003_gene2814	147.0	4.69e-32	N/A	N/A
Pfam	UHGV-0173823_8	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-0173823_8	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
KOfam	UHGV-0173823_9	K06400	371.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0173823_9	phrog_95	358.1	0	integrase	integration and excision
UniRef90	UHGV-0173823_9	UniRef90_A0A3D5PFZ1	387.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0173823_9	903814.ELI_1010	377.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0173823_9	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0173823_9	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0173823_9	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0173823_9	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0173823_9	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0173823_11	K22300	61.8	1.6e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0173823_11	phrog_8	62.6	7.3e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0173823_11	UniRef90_UPI0015701830	89.0	4.88e-20	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0173823_11	552396.HMPREF0863_00300	77.8	4.31e-16	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0173823_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0173823_11	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0173823_11	PF13560,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0173823_12	UniRef90_UPI00082E258D	48.9	0.00000439	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0173823_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0173823_12	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
Pfam	UHGV-0173823_14	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0173823_14	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0173823_16	phrog_298	106.5	2.6e-31	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0173823_16	UniRef90_A0A6M3JN22	211.0	0	Putative PD-(D/E)XK nuclease superfamily protein	N/A
eggNOG-mapper	UHGV-0173823_16	1171373.PACID_15720	72.4	0.00000000000227	Belongs to the helicase family. UvrD subfamily	N/A
COG	UHGV-0173823_16	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0173823_16	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0173823_17	phrog_155	109.1	4.1e-32	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0173823_17	UniRef90_UPI00096C2D47	167.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0173823_17	420246.GTNG_2854	153.0	2.81661e-43	ERF superfamily	N/A
Pfam	UHGV-0173823_17	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0173823_17	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0173823_18	phrog_72	45.8	0.00000000000095	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0173823_18	1118057.CAGX01000020_gene1649	62.8	0.000000000915	N/A	N/A
structural_annotation	UHGV-0173823_18	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0173823_19	phrog_7370	69.7	3.5e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0173823_19	UniRef90_A0A7K3ZA74	123.0	1.71e-34	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0173823_19	1232449.BAHV02000016_gene1841	71.2	0.0000000000000117	HNH nucleases	N/A
KOfam	UHGV-0173823_21	K03111	147.0	2.00386e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0173823_21	phrog_44	143.3	1.3004e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0173823_21	UniRef90_A0A356F1Z1	158.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0173823_21	562743.JH976434_gene1965	122.0	5.99e-34	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0173823_21	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0173823_21	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0173823_21	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0173823_21	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0173823_21	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0173823_22	phrog_5708	214.4	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0173823_22	UniRef90_A0A6A4UXR4	184.0	0	Phage replication initiation	N/A
eggNOG-mapper	UHGV-0173823_22	1507.HMPREF0262_00303	167.0	0	DnaD domain protein	N/A
COG	UHGV-0173823_22	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0173823_22	PF09681,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-0173823_23	K02315	159.0	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0173823_23	phrog_50	145.7	3.50325e-43	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0173823_23	UniRef90_F7V9D6	123.0	7.98e-30	Putative DnaC	N/A
eggNOG-mapper	UHGV-0173823_23	1399942.U3PBJ1_9CAUD	123.0	9.35e-31	IstB-like ATP binding protein	N/A
Pfam	UHGV-0173823_23	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
structural_annotation	UHGV-0173823_23	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0173823_26	phrog_997	85.6	5.9e-25	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0173823_26	UniRef90_A0A385YTL7	68.6	0.000000000003	Replication terminator protein	N/A
eggNOG-mapper	UHGV-0173823_26	1078085.HMPREF1210_01166	63.9	0.0000000000295	N/A	N/A
PHROG	UHGV-0173823_27	phrog_1029	205.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0173823_27	1078085.HMPREF1210_01165	141.0	1.34e-38	N/A	N/A
structural_annotation	UHGV-0173823_27	PF10065,COG5532	N/A	N/A	N/A	N/A
KOfam	UHGV-0173823_28	K06223	86.9	3e-25	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0173823_28	phrog_56	109.5	4.5e-32	DNA methyltransferase	other
UniRef90	UHGV-0173823_28	UniRef90_A0A3D2D5N1	291.0	0	Site-specific DNA-methyltransferase (adenine-specific)	N/A
eggNOG-mapper	UHGV-0173823_28	1327970.R9ZXR7_9CAUD	150.0	6.9098e-42	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0173823_28	MTase_II_00080	64.3	4.4e-18	Type II methyltransferase	RM
Pfam	UHGV-0173823_28	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-0173823_28	PF02086,MF_01012,TIGR00571,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0173823_29	phrog_799	183.7	0	DNA methyltransferase	other
UniRef90	UHGV-0173823_29	UniRef90_A0A414ZQZ4	248.0	0	NAD(P)-dependent oxidoreductase	N/A
eggNOG-mapper	UHGV-0173823_29	1123263.AUKY01000096_gene1823	207.0	0	DNA restriction-modification system	N/A
COG	UHGV-0173823_29	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
structural_annotation	UHGV-0173823_29	PF19587,MF_01872,NF011489,COG0286	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0173823_31	1235835.C814_01168	65.1	0.000000000000322	N/A	N/A
PHROG	UHGV-0173823_32	phrog_478	69.5	4e-20	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0173823_32	UniRef90_Q4Z926	60.1	0.00000000712	ORF101	N/A
eggNOG-mapper	UHGV-0173823_32	1283338.Q4Z926_BPTWO	60.1	0.00000000119	N/A	N/A
PHROG	UHGV-0173823_34	phrog_1454	77.5	1.1e-22	N/A	unknown function
UniRef90	UHGV-0173823_34	UniRef90_A0A0D7WZ49	78.2	3.42e-17	Phosphomannomutase	N/A
eggNOG-mapper	UHGV-0173823_34	1232453.BAIF02000027_gene4203	83.2	7.28e-20	N/A	N/A
structural_annotation	UHGV-0173823_37	PF04545,MF_00674,NF008895,COG1595	N/A	N/A	N/A	N/A
UniRef90	UHGV-0173823_39	UniRef90_UPI000B34C540	89.7	1.28e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0173823_39	1449126.JQKL01000046_gene2071	55.5	0.000000279	N/A	N/A
structural_annotation	UHGV-0173823_39	PF06056,COG2963	N/A	N/A	N/A	N/A
KOfam	UHGV-0173823_40	K21523	51.3	6e-17	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0173823_40	phrog_24361	79.3	3.1e-23	terminase	head and packaging
UniRef90	UHGV-0173823_40	UniRef90_R6ELB5	475.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0173823_40	693746.OBV_23980	244.0	0	phage Terminase large subunit	N/A
COG	UHGV-0173823_40	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0173823_40	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0173823_42	phrog_156	125.7	1.8e-37	portal protein	head and packaging
UniRef90	UHGV-0173823_42	UniRef90_A0A8D9UHD1	242.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0173823_42	1121091.AUMP01000003_gene2583	209.0	0	N/A	N/A
structural_annotation	UHGV-0173823_42	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0173823_44	phrog_267	97.4	1.7e-28	major head protein	head and packaging
UniRef90	UHGV-0173823_44	UniRef90_A0A7C6CNA9	161.0	1.26117e-44	P22 coat protein-protein 5 domain protein	N/A
eggNOG-mapper	UHGV-0173823_44	665956.HMPREF1032_03906	278.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-0173823_44	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0173823_46	693746.OBV_23880	72.4	0.000000000000777	N/A	N/A
structural_annotation	UHGV-0173823_46	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0173823_47	phrog_3287	68.9	8.2e-20	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0173823_47	1232449.BAHV02000016_gene1816	235.0	0	N/A	N/A
structural_annotation	UHGV-0173823_47	PF11134,MF_01282,TIGR03300,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-0173823_48	phrog_38418	62.9	5.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0173823_48	33035.JPJF01000033_gene2261	65.9	0.0000000139	tail collar domain protein	N/A
COG	UHGV-0173823_48	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0173823_49	phrog_5302	186.2	0	tail protein	tail
UniRef90	UHGV-0173823_49	UniRef90_A0A388TCL1	226.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0173823_49	1151292.QEW_0671	208.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
Pfam	UHGV-0173823_49	PF13620	N/A	N/A	Carboxypeptidase regulatory-like domain	CarboxypepD_reg
COG	UHGV-0173823_49	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0173823_49	PF00041	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0173823	Yes	41,366	35	100	1
UHGV-0195816	No	41,365	35	100	1
UHGV-0020592	No	41,257	35	100	1
UHGV-1342847	No	40,919	35	100	1
UHGV-1364579	No	39,339	35	100	1
UHGV-1496916	No	46,916	35	100	1
UHGV-0053103	No	46,877	35	100	1
UHGV-0368125	No	45,135	35	100	1
UHGV-0012394	No	42,661	35	100	1
UHGV-0020460	No	41,270	35	100	1
UHGV-0008312	No	34,235	36	83	1
UHGV-0618640	No	34,042	36	82	1