vOTU vOTU-001378

vOTU: vOTU-001378

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-001378
Number of genomes	12
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-02660 → vGENUS-03358 → vSUBGEN-02680 → vOTU-001378
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → QALW01 → UMGS1338 → UMGS1338 sp900550805
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0180734
Biosample ID	N/A
Genome length (bp)	36,415 bps
CheckV completeness	100.00% (Complete)
CDS count	57
CDS density	89.10%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → QALW01 → UMGS1338 → UMGS1338 sp900550805	Total connections	21	Host agreement	80.95
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0180734_3	phrog_8	69.9	5.6e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0180734_3	UniRef90_A0A640NQ17	67.8	0.00000000000208	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0180734_3	1027396.LMOSA_21110	63.9	0.00000000000939	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0180734_3	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0180734_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0180734_3	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0180734_4	UniRef90_A0A1C6HD04	72.8	0.0000000000001	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0180734_4	411461.DORFOR_02407	52.0	0.00000725	Putative restriction endonuclease	N/A
Pfam	UHGV-0180734_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0180734_4	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-0180734_4	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0180734_5	K14059	187.8	0	int; integrase	N/A
PHROG	UHGV-0180734_5	phrog_1	169.5	0	integrase	integration and excision
UniRef90	UHGV-0180734_5	UniRef90_A0A316QG14	280.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0180734_5	1514668.JOOA01000001_gene242	196.0	0	Phage integrase family	N/A
Pfam	UHGV-0180734_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0180734_5	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0180734_5	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_6	phrog_4897	108.2	1.1e-31	kinase	other
UniRef90	UHGV-0180734_6	UniRef90_UPI0004802E43	111.0	1.24e-30	N/A	N/A
eggNOG-mapper	UHGV-0180734_6	500635.MITSMUL_03175	90.9	1.63e-21	N/A	N/A
Pfam	UHGV-0180734_6	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-0180734_7	phrog_7339	92.6	4.5e-27	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180734_7	UniRef90_A0A7C6W8G9	266.0	0	Metallophos domain-containing protein	N/A
eggNOG-mapper	UHGV-0180734_7	1150474.JQJI01000006_gene784	96.7	4.89e-21	metallophosphoesterase	N/A
Pfam	UHGV-0180734_7	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0180734_7	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-0180734_7	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0180734_10	UniRef90_A0A1C5WHV3	68.2	0.0000000000000572	RHH_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0180734_10	665956.HMPREF1032_00120	48.1	0.000000844	N/A	N/A
structural_annotation	UHGV-0180734_10	PF01402,NF041793,COG4453	N/A	N/A	N/A	N/A
KOfam	UHGV-0180734_11	K07741	57.3	5.6e-16	antB; anti-repressor protein	N/A
PHROG	UHGV-0180734_11	phrog_130	189.5	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0180734_11	UniRef90_A0A396LJD2	276.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0180734_11	552398.HMPREF0866_02978	230.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0180734_11	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0180734_11	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0180734_11	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0180734_11	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-0180734_12	UniRef90_A0A7X7WBI0	160.0	2.66247e-44	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0180734_12	279010.BL01582	68.6	0.000000000298	n-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0180734_12	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0180734_12	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0180734_12	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
PHROG	UHGV-0180734_13	phrog_1129	52.5	0.0000000000000064	holin	lysis
UniRef90	UHGV-0180734_13	UniRef90_A0A316QDA6	92.0	6.09e-22	Enolase	N/A
eggNOG-mapper	UHGV-0180734_13	411473.RUMCAL_01944	73.6	9.48e-16	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0180734_13	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0180734_13	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_14	phrog_1863	81.7	4.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0180734_14	1203606.HMPREF1526_02027	96.3	2.45e-25	N/A	N/A
PHROG	UHGV-0180734_17	phrog_1194	56.5	4.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0180734_17	742740.HMPREF9474_03515	55.1	0.0000000743	N/A	N/A
structural_annotation	UHGV-0180734_17	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_18	phrog_1535	131.0	2.2e-39	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0180734_18	1121866.AUGK01000003_gene1437	199.0	0	phage tail tape measure protein	N/A
COG	UHGV-0180734_18	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
UniRef90	UHGV-0180734_20	UniRef90_A0A843HLA7	96.3	1.6e-23	N/A	N/A
eggNOG-mapper	UHGV-0180734_20	1123263.AUKY01000015_gene1618	50.1	0.00000287	N/A	N/A
Pfam	UHGV-0180734_20	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0180734_20	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_21	phrog_158	46.9	0.00000000000055	major tail protein	tail
eggNOG-mapper	UHGV-0180734_21	1121333.JMLH01000047_gene1013	182.0	0	N/A	N/A
structural_annotation	UHGV-0180734_21	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0180734_22	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180734_23	397290.C810_01411	70.1	0.000000000000955	N/A	N/A
eggNOG-mapper	UHGV-0180734_24	1232453.BAIF02000058_gene1630	60.5	0.000000000589	N/A	N/A
UniRef90	UHGV-0180734_25	UniRef90_D7GQN2	77.0	3.74e-16	Phage QLRG family, putative DNA packaging	N/A
Pfam	UHGV-0180734_25	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0180734_25	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_26	phrog_422	275.6	0	major head protein	head and packaging
UniRef90	UHGV-0180734_26	UniRef90_A0A345MKD0	214.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-0180734_26	645991.Sgly_0340	253.0	0	N/A	N/A
structural_annotation	UHGV-0180734_26	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_28	phrog_64	178.6	0	portal protein	head and packaging
UniRef90	UHGV-0180734_28	UniRef90_A0A3D3Y472	334.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0180734_28	1123263.AUKY01000015_gene1609	288.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0180734_28	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0180734_28	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_29	phrog_38	165.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0180734_29	UniRef90_UPI00164E3A67	540.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0180734_29	476272.RUMHYD_01940	322.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0180734_29	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0180734_29	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0180734_29	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-0180734_31	K14060	98.8	6.9e-29	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0180734_31	phrog_125	158.8	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180734_31	UniRef90_A0A810Q558	258.0	0	DNA recombinase	N/A
eggNOG-mapper	UHGV-0180734_31	1297617.JPJD01000058_gene1031	215.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0180734_31	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0180734_31	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0180734_31	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_33	phrog_7028	40.5	0.000000000033	N/A	unknown function
eggNOG-mapper	UHGV-0180734_36	1235793.C809_00539	58.2	0.000000211	N/A	N/A
PHROG	UHGV-0180734_37	phrog_8841	453.2	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180734_37	UniRef90_A0A1C6FPW9	475.0	0	Superfamily II helicase and inactivated derivatives	N/A
eggNOG-mapper	UHGV-0180734_37	742738.HMPREF9460_02495	392.0	0	N/A	N/A
Pfam	UHGV-0180734_37	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0180734_37	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0180734_37	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0180734_37	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0180734_38	K02316	58.2	1.4e-16	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0180734_38	phrog_11992	70.5	2.7e-20	N/A	unknown function
UniRef90	UHGV-0180734_38	UniRef90_UPI00083043CA	115.0	3.13e-29	CHC2 zinc finger domain-containing protein	N/A
eggNOG-mapper	UHGV-0180734_38	153496.JNAB01000012_gene1337	67.0	0.000000000168	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	N/A
PADLOC	UHGV-0180734_38	drt-UG29	55.8	4.4e-16	DRT	DRT
Pfam	UHGV-0180734_38	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0180734_38	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0180734_38	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_39	phrog_1374	48.0	0.00000000000015	N/A	unknown function
UniRef90	UHGV-0180734_39	UniRef90_A0A4R2SLJ8	49.7	0.00000221	Transmembrane Fragile-X-F protein	N/A
eggNOG-mapper	UHGV-0180734_39	1168478.I6R128_9CAUD	50.4	0.000000157	N/A	N/A
PHROG	UHGV-0180734_40	phrog_986	109.7	7.5e-33	RNA-binding protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0180734_40	1582152.A0A0A8WI22_9CAUD	84.3	1.05e-17	N/A	N/A
Pfam	UHGV-0180734_40	PF12961	N/A	N/A	N/A	DUF3850
PHROG	UHGV-0180734_42	phrog_478	120.4	7.9e-36	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0180734_42	UniRef90_R6E548	180.0	0	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-0180734_42	272623.L62008	98.6	9.5e-25	N/A	N/A
PHROG	UHGV-0180734_44	phrog_757	190.8	0	DNA methyltransferase	other
UniRef90	UHGV-0180734_44	UniRef90_A0A3A6EPW1	266.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0180734_44	748224.HMPREF9436_03069	243.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0180734_44	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0180734_44	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0180734_45	K00390	72.8	2.1e-21	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0180734_45	phrog_424	153.6	1.4013e-45	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0180734_45	UniRef90_A0A3D4KZM8	382.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0180734_45	1280696.ATVY01000096_gene1971	305.0	0	N/A	N/A
Pfam	UHGV-0180734_45	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0180734_45	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0180734_45	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_48	phrog_3490	141.4	4.49957e-42	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180734_48	UniRef90_A0A1C6FNL5	187.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0180734_48	411460.RUMTOR_02068	166.0	0	N/A	N/A
Pfam	UHGV-0180734_48	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0180734_48	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0180734_49	K03111	125.3	7.8e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0180734_49	phrog_44	124.2	1.1e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180734_49	UniRef90_A0A3D0X741	127.0	3.6e-35	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0180734_49	428125.CLOLEP_03546	120.0	2.64e-33	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0180734_49	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0180734_49	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0180734_49	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0180734_49	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0180734_49	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_51	phrog_1227	194.3	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180734_51	UniRef90_A0A3C0NN37	276.0	0	N/A	N/A
eggNOG-mapper	UHGV-0180734_51	1120998.AUFC01000030_gene2216	198.0	0	N/A	N/A
Pfam	UHGV-0180734_51	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0180734_51	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0180734_51	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0180734_52	phrog_21613	53.2	0.0000000000000046	N/A	unknown function
eggNOG-mapper	UHGV-0180734_52	1120998.AUFC01000030_gene2214	93.2	4.66e-21	N/A	N/A
Pfam	UHGV-0180734_54	PF12773	N/A	N/A	Double zinc ribbon	DZR
Pfam	UHGV-0180734_56	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0180734	Yes	36,415	50	100	1
UHGV-0196205	No	36,369	50	100	1
UHGV-0361761	No	35,915	50	100	1
UHGV-1373630	No	35,915	50	100	1
UHGV-0174715	No	34,865	50	100	1
UHGV-2050070	No	35,918	50	100	1
UHGV-0136451	No	34,633	50	99	1
UHGV-1534542	No	33,730	50	97	1
UHGV-0190445	No	32,935	50	94	1
UHGV-0174723	No	32,758	50	94	1
UHGV-1400111	No	29,272	50	84	1
UHGV-1333730	No	12,552	52	36	1