vOTU vOTU-001551

vOTU: vOTU-001551

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-001551
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → Onthocola_B → Onthocola_B sp000438075
Taxonomy (UHGV)	vFAM-00114 → vSUBFAM-04768 → vGENUS-08900 → vSUBGEN-09613 → vOTU-001551
Host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Intestinibacter → Intestinibacter sp900540355
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1368351
Biosample ID	SAMEA2737743
Genome length (bp)	30,658 bps
CheckV completeness	100.00% (Complete)
CDS count	34
CDS density	83.91%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Intestinibacter → Intestinibacter sp900540355	Total connections	13	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → Onthocola_B → Onthocola_B sp000438075	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1368351_1	phrog_2538	76.0	4.5e-22	terminase small subunit	head and packaging
UniRef90	UHGV-1368351_1	UniRef90_A0A317TE87	82.0	8.04e-18	HTH_Tnp_IS630 domain-containing protein	N/A
eggNOG-mapper	UHGV-1368351_1	1391647.AVSV01000022_gene2554	67.0	0.00000000000159	N/A	N/A
Pfam	UHGV-1368351_1	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
PHROG	UHGV-1368351_4	phrog_59	96.7	1.6e-28	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1368351_4	UniRef90_A0A2Z4PZJ8	76.6	0.0000000000000276	Endonuclease	N/A
eggNOG-mapper	UHGV-1368351_4	212035.YL245_MIMIV	72.0	0.00000000000188	HNH endonuclease	N/A
PADLOC	UHGV-1368351_4	HEase_00016	55.3	0.000000000000001	homing endonuclease	RM
Pfam	UHGV-1368351_4	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-1368351_4	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
PHROG	UHGV-1368351_6	phrog_757	110.2	1.4e-32	DNA methyltransferase	other
UniRef90	UHGV-1368351_6	UniRef90_UPI001C6E5C61	349.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1368351_6	411473.RUMCAL_00286	306.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-1368351_6	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1368351_6	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1368351_6	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1368351_7	phrog_2715	68.7	8.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1368351_7	999425.HMPREF9186_02019	59.7	0.00000000467	N/A	N/A
PHROG	UHGV-1368351_9	phrog_16	85.6	1.1e-25	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1368351_9	UniRef90_A0A098B3C0	302.0	0	Type III restriction enzyme, res subunit	N/A
eggNOG-mapper	UHGV-1368351_9	935837.JAEK01000022_gene1159	236.0	0	N/A	N/A
Pfam	UHGV-1368351_9	PF00270	N/A	N/A	DEAD/DEAH box helicase	DEAD
Pfam	UHGV-1368351_9	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
structural_annotation	UHGV-1368351_9	PF02399,MF_00964,NF003419,COG0513	N/A	N/A	N/A	N/A
PHROG	UHGV-1368351_10	phrog_31036	48.8	0.000000000000089	N/A	unknown function
structural_annotation	UHGV-1368351_12	PF13652	N/A	N/A	N/A	N/A
PHROG	UHGV-1368351_14	phrog_270	53.7	0.0000000000000048	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1368351_14	UniRef90_UPI001896EFD9	112.0	1.87e-28	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1368351_14	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1368351_14	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
UniRef90	UHGV-1368351_15	UniRef90_UPI001E3C05DB	68.9	0.0000000000000176	DNA-binding protein	N/A
KOfam	UHGV-1368351_16	K14059	241.6	0	int; integrase	N/A
PHROG	UHGV-1368351_16	phrog_1	227.6	0	integrase	integration and excision
UniRef90	UHGV-1368351_16	UniRef90_A0A1I3P7G4	262.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1368351_16	1211817.CCAT010000053_gene2100	252.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-1368351_16	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1368351_16	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1368351_16	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1368351_16	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1368351_16	PF00589,PF02920,MF_01808,TIGR02224,COG4974,COG3422	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1368351_17	445973.CLOBAR_01906	108.0	2.79e-29	N/A	N/A
COG	UHGV-1368351_17	COG5423	N/A	N/A	Predicted metal-binding protein	N/A
PHROG	UHGV-1368351_18	phrog_16573	45.9	0.00000000000067	N/A	unknown function
Pfam	UHGV-1368351_18	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
KOfam	UHGV-1368351_19	K11062	90.6	1.8e-26	entD; probable enterotoxin D	N/A
PHROG	UHGV-1368351_19	phrog_19445	252.8	0	tail tip protein Tal	head and packaging
UniRef90	UHGV-1368351_19	UniRef90_UPI0018AA7BAA	2461.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1368351_19	665959.HMPREF1013_00189	248.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1368351_19	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1368351_19	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
Pfam	UHGV-1368351_19	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
NCBIFam	UHGV-1368351_19	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1368351_19	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1368351_19	PF14594,PF08239,PF19081,PF13229,TIGR01665,NF040678,COG4926,COG4991,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1368351_20	phrog_33	63.6	4.9e-18	distal tail protein Dit	tail
UniRef90	UHGV-1368351_20	UniRef90_A0A1C6DUD4	327.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1368351_20	720555.BATR1942_09800	87.0	1.17e-16	Phage tail protein	N/A
Pfam	UHGV-1368351_20	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1368351_20	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1368351_20	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1368351_20	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1368351_21	phrog_23464	192.3	0	N/A	unknown function
UniRef90	UHGV-1368351_21	UniRef90_A0A1C6DTW9	364.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1368351_21	33035.JPJF01000023_gene3232	142.0	7.83e-33	phage tail tape measure protein	N/A
COG	UHGV-1368351_21	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1368351_23	phrog_1021	41.7	0.000000000018	N/A	unknown function
PHROG	UHGV-1368351_24	phrog_885	112.2	4.1e-33	major tail protein	tail
UniRef90	UHGV-1368351_24	UniRef90_Q894J4	73.2	0.0000000000011	Conserved protein	N/A
eggNOG-mapper	UHGV-1368351_24	1321814.HMPREF9089_00935	70.9	0.00000000000116	N/A	N/A
structural_annotation	UHGV-1368351_24	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1368351_25	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1368351_26	phrog_5	49.0	0.00000000000014	tail completion or Neck1 protein	connector
UniRef90	UHGV-1368351_26	UniRef90_A0A1C6DUI2	161.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1368351_26	1504822.CCNO01000013_gene284	56.2	0.00000000931	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1368351_26	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1368351_26	PF04883,TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1368351_27	1391647.AVSV01000022_gene2564	79.0	1.02e-17	N/A	N/A
structural_annotation	UHGV-1368351_27	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1368351_28	1391647.AVSV01000022_gene2563	51.6	0.000000592	N/A	N/A
structural_annotation	UHGV-1368351_28	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1368351_29	phrog_267	132.5	3e-39	major head protein	head and packaging
UniRef90	UHGV-1368351_29	UniRef90_UPI001C122975	228.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1368351_29	1321778.HMPREF1982_03550	223.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-1368351_29	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1368351_30	phrog_172	105.2	7.7e-31	head scaffolding protein	head and packaging
UniRef90	UHGV-1368351_30	UniRef90_UPI0018AA774C	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-1368351_30	1151292.QEW_0415	169.0	0	N/A	N/A
Pfam	UHGV-1368351_30	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1368351_30	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1368351_31	phrog_115	148.0	7.84727e-44	minor head protein	head and packaging
UniRef90	UHGV-1368351_31	UniRef90_A0A1C6DTD1	271.0	0	NAD(+)--arginine ADP-ribosyltransferase EFV	N/A
eggNOG-mapper	UHGV-1368351_31	1345695.CLSA_c29950	178.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1368351_31	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1368351_31	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1368351_31	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1368351_31	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1368351_32	phrog_64	324.5	0	portal protein	head and packaging
UniRef90	UHGV-1368351_32	UniRef90_A0A1C6DTC3	535.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-1368351_32	1321778.HMPREF1982_03547	498.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-1368351_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1368351_32	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1368351_32	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1368351_33	phrog_38	185.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1368351_33	UniRef90_A0A0C1R0Y0	554.0	0	Putative 6-phospho-beta-glucosidase BglA	N/A
eggNOG-mapper	UHGV-1368351_33	1123405.AUMM01000039_gene155	472.0	0	TIGRFAM Phage	N/A
COG	UHGV-1368351_33	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1368351_33	PF17289,PF03354,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1368351	Yes	30,658	28	100	1
UHGV-0069291	No	30,658	28	100	1
UHGV-0189557	No	30,658	28	100	1
UHGV-2036603	No	30,658	28	100	1