vOTU vOTU-001811

vOTU: vOTU-001811

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-001811
Number of genomes	15
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00007 → vGENUS-01132 → vSUBGEN-38760 → vOTU-001811
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0228292
Biosample ID	SAMN06164643
Genome length (bp)	53,412 bps
CheckV completeness	100.00% (Complete)
CDS count	95
CDS density	83.95%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	446	Host agreement	98.21
PHIST-predicted host lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0228292_2	phrog_29	168.3	0	major head protein	head and packaging
UniRef90	UHGV-0228292_2	UniRef90_A0A2Z4QBB4	341.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-0228292_2	476272.RUMHYD_01946	234.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0228292_2	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0228292_2	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0228292_3	UniRef90_R6N215	82.0	5.26e-18	Phage QLRG family putative DNA packaging	N/A
structural_annotation	UHGV-0228292_3	PF05135	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228292_4	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228292_6	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_7	phrog_158	43.5	0.0000000000058	major tail protein	tail
UniRef90	UHGV-0228292_7	UniRef90_UPI001D06C8CA	85.9	1.08e-18	phage tail protein	N/A
eggNOG-mapper	UHGV-0228292_7	1449343.JQLQ01000002_gene1514	58.2	0.0000000143	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0228292_7	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0228292_8	UniRef90_A0A847YX95	71.2	0.000000000000102	N/A	N/A
eggNOG-mapper	UHGV-0228292_8	1123263.AUKY01000015_gene1618	62.0	0.0000000000689	N/A	N/A
Pfam	UHGV-0228292_8	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0228292_8	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0228292_9	1121333.JMLH01000047_gene1011	76.6	5.5e-16	N/A	N/A
PHROG	UHGV-0228292_10	phrog_28775	163.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0228292_10	1121866.AUGK01000003_gene1437	191.0	0	phage tail tape measure protein	N/A
COG	UHGV-0228292_10	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0228292_11	phrog_1194	88.6	5.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0228292_11	665956.HMPREF1032_03056	51.6	0.00000178	N/A	N/A
Pfam	UHGV-0228292_11	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0228292_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_12	phrog_13879	210.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0228292_12	1122919.KB905559_gene1344	150.0	1.51e-35	N/A	N/A
Pfam	UHGV-0228292_12	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0228292_12	PF14594,PF19789,PF03256,PF09134,NF033848,COG3500,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_13	phrog_18725	70.9	1.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0228292_13	1226322.HMPREF1545_00062	82.8	7.83e-18	N/A	N/A
structural_annotation	UHGV-0228292_14	NF012201	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228292_16	NF040910	N/A	N/A	N/A	N/A
KOfam	UHGV-0228292_17	K07273	165.8	0	acm; lysozyme	N/A
PHROG	UHGV-0228292_17	phrog_291	139.3	3.59994e-41	endolysin	lysis
UniRef90	UHGV-0228292_17	UniRef90_UPI001D0EE7D8	253.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0228292_17	748224.HMPREF9436_00154	246.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0228292_17	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0228292_17	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0228292_17	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_19	phrog_15303	83.0	2.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0228292_21	1378168.N510_03079	93.6	2.43e-20	N/A	N/A
eggNOG-mapper	UHGV-0228292_23	1415774.U728_1699	120.0	5.29e-33	N/A	N/A
structural_annotation	UHGV-0228292_25	NF010188	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228292_26	PF07878	N/A	N/A	N/A	N/A
Pfam	UHGV-0228292_27	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0228292_27	NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-0228292_28	K03496	231.6	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0228292_28	phrog_164	160.6	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228292_28	UniRef90_A0A1G6FF50	209.0	0	Chromosome partitioning protein	N/A
eggNOG-mapper	UHGV-0228292_28	1408423.JHYA01000021_gene392	191.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-0228292_28	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0228292_28	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0228292_28	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_30	phrog_4402	112.1	4.9e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228292_30	UniRef90_A0A0H5Q331	230.0	0	Rep_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0228292_30	999413.HMPREF1094_04438	137.0	1.17e-34	Initiator Replication protein	N/A
Pfam	UHGV-0228292_30	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-0228292_30	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-0228292_30	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-0228292_30	PF01051,PF21205,NF010305,COG5527	N/A	N/A	N/A	N/A
UniRef90	UHGV-0228292_31	UniRef90_A0A2A7AM70	189.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0228292_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0228292_31	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0228292_31	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228292_35	PF16311,NF038219	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_36	phrog_8	55.6	0.0000000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-0228292_36	UniRef90_A0A373XY93	95.1	5.86e-23	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0228292_36	665956.HMPREF1032_02614	65.9	0.00000000000217	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0228292_36	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0228292_36	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0228292_37	UniRef90_A0A7X1LWA7	80.5	2.17e-18	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0228292_37	428125.CLOLEP_02737	59.7	0.0000000000581	N/A	N/A
structural_annotation	UHGV-0228292_37	TIGR03070	N/A	N/A	N/A	N/A
KOfam	UHGV-0228292_38	K07741	119.6	6.1e-35	antB; anti-repressor protein	N/A
PHROG	UHGV-0228292_38	phrog_130	262.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0228292_38	UniRef90_R5ANG2	307.0	0	Phage antirepressor protein	N/A
eggNOG-mapper	UHGV-0228292_38	1589751.A0A0C5AEJ9_9CAUD	279.0	0	DNA binding	N/A
Pfam	UHGV-0228292_38	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0228292_38	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-0228292_38	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228292_39	PF10922	N/A	N/A	N/A	N/A
Pfam	UHGV-0228292_41	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0228292_41	PF13443,TIGR02684,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228292_42	PF14143	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0228292_43	272623.L157023	48.5	0.00000763	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	N/A
COG	UHGV-0228292_43	COG1327	N/A	N/A	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	N/A
structural_annotation	UHGV-0228292_43	PF04606,NF007241,COG3478	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_44	phrog_38771	64.1	1.8e-18	N/A	unknown function
Pfam	UHGV-0228292_45	PF13451	N/A	N/A	Probable zinc-ribbon domain	zf-trcl
COG	UHGV-0228292_45	COG1278	N/A	N/A	Cold shock protein, CspA family	N/A
structural_annotation	UHGV-0228292_45	PF13451	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_46	phrog_2872	239.4	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228292_46	UniRef90_A0A8J6JIF1	271.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0228292_46	754027.HMPREF9554_00709	214.0	0	N/A	N/A
Pfam	UHGV-0228292_46	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0228292_46	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_47	phrog_18107	73.6	3.7e-21	N/A	unknown function
UniRef90	UHGV-0228292_47	UniRef90_UPI00058F46CC	90.9	1.64e-19	N/A	N/A
eggNOG-mapper	UHGV-0228292_47	903814.ELI_1274	155.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0228292_47	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_48	phrog_757	183.2	0	DNA methyltransferase	other
UniRef90	UHGV-0228292_48	UniRef90_UPI001A9B5584	411.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0228292_48	748224.HMPREF9436_03069	303.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0228292_48	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0228292_48	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_50	phrog_843	57.5	1.6e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228292_50	UniRef90_UPI001159D907	115.0	2.08e-29	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0228292_50	929506.CbC4_1203	110.0	3.96e-28	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
structural_annotation	UHGV-0228292_50	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228292_52	PF11998,COG5420	N/A	N/A	N/A	N/A
UniRef90	UHGV-0228292_58	UniRef90_A0A2V2F8Z8	76.3	3.95e-16	N/A	N/A
Pfam	UHGV-0228292_58	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0228292_59	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0228292_63	K22300	55.3	0.0000000000000017	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0228292_63	phrog_3	47.7	0.0000000000007	transcriptional repressor	transcription regulation
Pfam	UHGV-0228292_63	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0228292_63	PF01381,MF_00535,TIGR03070,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228292_66	NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-0228292_69	UniRef90_Q5YA82	70.1	0.00000000000006	28	N/A
PHROG	UHGV-0228292_70	phrog_678	45.3	0.0000000000018	replication initiation O-like	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0228292_70	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0228292_70	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0228292_71	K02314	213.9	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0228292_71	phrog_19	225.1	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228292_71	UniRef90_A0A564SBR1	429.0	0	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-0228292_71	1203606.HMPREF1526_01325	164.0	2.57839e-43	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0228292_71	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0228292_71	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0228292_71	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0228292_72	1121865.OMW_01950	80.1	8.42e-19	N/A	N/A
structural_annotation	UHGV-0228292_72	PF17516,NF007197	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_73	phrog_186	49.3	0.000000000000087	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228292_73	UniRef90_UPI00189A2F30	92.0	6.05e-19	replication initiator protein A	N/A
eggNOG-mapper	UHGV-0228292_73	411468.CLOSCI_02792	94.4	2.43e-20	Replication initiator protein A (RepA) N-terminus	N/A
Pfam	UHGV-0228292_73	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0228292_73	COG1349	N/A	N/A	DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family	N/A
structural_annotation	UHGV-0228292_73	PF06970,MF_01177,NF040642,COG5625	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_76	phrog_434	43.4	0.0000000000057	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
COG	UHGV-0228292_76	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
PHROG	UHGV-0228292_82	phrog_14275	42.2	0.000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0228292_82	1280676.AUJO01000001_gene2313	68.6	0.000000000000274	N/A	N/A
Pfam	UHGV-0228292_82	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
KOfam	UHGV-0228292_84	K07741	66.5	9.6e-19	antB; anti-repressor protein	N/A
PHROG	UHGV-0228292_84	phrog_130	227.9	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0228292_84	UniRef90_A0A3E2XCY2	261.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0228292_84	1289596.M1PKL6_9CAUD	253.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0228292_84	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0228292_84	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-0228292_84	PF02498,PF03374,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228292_85	PF19807,NF041793,COG4877	N/A	N/A	N/A	N/A
UniRef90	UHGV-0228292_87	UniRef90_A0A417DZ16	52.4	0.000000241	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0228292_87	PF20075,TIGR02612,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0228292_88	K14060	96.2	4.4e-28	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0228292_88	phrog_125	130.2	1.5e-38	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228292_88	UniRef90_UPI001A9B5A42	244.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0228292_88	1443122.Z958_05795	158.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0228292_88	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0228292_88	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0228292_88	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_91	phrog_38	177.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0228292_91	UniRef90_UPI000419A6BC	431.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0228292_91	1121866.AUGK01000003_gene1428	431.0	0	chromosome segregation	N/A
COG	UHGV-0228292_91	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228292_91	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0228292_94	phrog_64	140.4	1.10002e-41	portal protein	head and packaging
UniRef90	UHGV-0228292_94	UniRef90_A0A371ILT4	333.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0228292_94	1121866.AUGK01000003_gene1429	275.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0228292_94	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0228292_94	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0228292	Yes	53,412	48	100	1
UHGV-0198833	No	53,412	48	100	1
UHGV-0257978	No	53,292	48	100	1
UHGV-0296186	No	53,292	48	100	1
UHGV-0164336	No	53,438	48	93	1
UHGV-0281759	No	53,370	48	93	1
UHGV-0273606	No	53,301	48	93	1
UHGV-0165879	No	53,273	48	92	1
UHGV-1412388	No	53,273	48	92	1
UHGV-1418175	No	53,237	48	92	1
UHGV-1411524	No	53,115	48	92	1
UHGV-1399243	No	29,350	48	51	1
UHGV-1571285	No	21,467	47	37	1
UHGV-1627756	No	12,467	49	22	1
UHGV-1616919	No	12,463	49	22	1