vOTU vOTU-001854

vOTU: vOTU-001854

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-001854
Number of genomes	7
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00034 → vSUBGEN-07493 → vOTU-001854
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2030866
Biosample ID	N/A
Genome length (bp)	40,531 bps
CheckV completeness	100.00% (Complete)
CDS count	69
CDS density	88.72%
tRNA count	5
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	822	Host agreement	98.05
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2030866_1	phrog_5765	46.8	0.00000000000036	N/A	unknown function
UniRef90	UHGV-2030866_1	UniRef90_UPI001D0EF465	53.1	0.000000021	BC1881 family protein	N/A
eggNOG-mapper	UHGV-2030866_1	642492.Clole_0933	52.0	0.0000000077	N/A	N/A
NCBIFam	UHGV-2030866_1	NF033495.1	N/A	N/A	BC1881 family protein	N/A
PHROG	UHGV-2030866_2	phrog_3754	97.6	1.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-2030866_2	1235790.C805_00054	116.0	8.29e-32	N/A	N/A
PHROG	UHGV-2030866_3	phrog_21718	86.4	3.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-2030866_3	397290.C810_05210	79.0	2.26e-16	N/A	N/A
PHROG	UHGV-2030866_4	phrog_22984	72.1	7.4e-21	N/A	unknown function
PHROG	UHGV-2030866_5	phrog_16490	199.6	0	N/A	unknown function
eggNOG-mapper	UHGV-2030866_5	397290.C810_01328	127.0	3.65e-32	N/A	N/A
PHROG	UHGV-2030866_6	phrog_20016	207.0	0	N/A	unknown function
UniRef90	UHGV-2030866_6	UniRef90_A0A285PT46	217.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-2030866_6	1226322.HMPREF1545_00077	186.0	0	N/A	N/A
structural_annotation	UHGV-2030866_6	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2030866_7	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-2030866_9	K14059	141.3	1.10002e-41	int; integrase	N/A
PHROG	UHGV-2030866_9	phrog_1	164.1	0	integrase	integration and excision
UniRef90	UHGV-2030866_9	UniRef90_A0A6N7TNQ4	727.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-2030866_9	411471.SUBVAR_05137	259.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2030866_9	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2030866_9	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-2030866_9	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-2030866_10	UniRef90_A0A6N7TLT0	370.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2030866_10	266265.Bxe_A3948	53.1	0.000000484	Helix-turn-helix domain	N/A
Pfam	UHGV-2030866_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2030866_10	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2030866_10	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-2030866_13	UniRef90_A0A1W2B3I7	96.7	7.45e-21	Ig-like domain (Group 2)	N/A
eggNOG-mapper	UHGV-2030866_13	321955.AAGP01000017_gene2211	54.3	0.00000111	N/A	N/A
structural_annotation	UHGV-2030866_13	PF16900,NF040991	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_16	phrog_8	51.4	0.000000000000024	transcriptional regulator	transcription regulation
UniRef90	UHGV-2030866_16	UniRef90_UPI001C020D87	142.0	1.45006e-41	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2030866_16	198094.BA_3829	56.6	0.0000000167	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2030866_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2030866_16	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2030866_16	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-2030866_17	K07729	40.4	0.000000000062	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-2030866_17	phrog_8	42.5	0.000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-2030866_17	UniRef90_UPI001C009F10	119.0	6.56e-34	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-2030866_17	1268072.PSAB_01325	52.4	0.0000000318	Transcriptional regulator	N/A
Pfam	UHGV-2030866_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2030866_17	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2030866_17	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2030866_18	K07741	103.8	3.9e-30	antB; anti-repressor protein	N/A
PHROG	UHGV-2030866_18	phrog_63	193.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-2030866_18	UniRef90_A0A844D5R9	415.0	0	Phage regulatory protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-2030866_18	1423816.BACQ01000027_gene970	246.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-2030866_18	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-2030866_18	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-2030866_18	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-2030866_18	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-2030866_18	PF03374,PF09669,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2030866_19	760568.Desku_0919	100.0	2.45e-23	N/A	N/A
structural_annotation	UHGV-2030866_19	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2030866_20	1121865.OMW_01950	75.1	7.98e-17	N/A	N/A
structural_annotation	UHGV-2030866_20	PF17516,NF007197	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2030866_23	PF10743,NF033787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2030866_24	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2030866_25	PF09537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2030866_26	PF14120	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_28	phrog_561	109.1	4.3e-32	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2030866_28	UniRef90_UPI0011C8A287	146.0	2.18e-40	recombinase RecT	N/A
eggNOG-mapper	UHGV-2030866_28	33035.JPJF01000071_gene4462	150.0	8.61799e-43	N/A	N/A
structural_annotation	UHGV-2030866_28	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-2030866_29	K03111	140.5	1.90002e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2030866_29	phrog_44	147.0	1.09301e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2030866_29	UniRef90_A0A329TTF5	213.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2030866_29	748224.HMPREF9436_00638	224.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-2030866_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2030866_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2030866_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2030866_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2030866_29	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_30	phrog_186	73.4	3.7e-21	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2030866_30	UniRef90_UPI001C02E649	360.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-2030866_30	718252.FP2_01000	177.0	0	N/A	N/A
Pfam	UHGV-2030866_30	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
Pfam	UHGV-2030866_30	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-2030866_30	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-2030866_30	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-2030866_30	PF09681,MF_01819,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
UniRef90	UHGV-2030866_31	UniRef90_A0A417H740	95.5	1.54e-22	N/A	N/A
structural_annotation	UHGV-2030866_31	NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-2030866_34	K01160	59.2	1.4e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2030866_34	phrog_34	59.9	5.2e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2030866_34	UniRef90_A0A6N7TND6	209.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-2030866_34	875454.BAEW01000002_gene491	131.0	7.85e-38	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2030866_34	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2030866_34	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2030866_34	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_36	phrog_36	68.6	1e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-2030866_36	UniRef90_A0A6N7TNN9	272.0	0	N/A	N/A
eggNOG-mapper	UHGV-2030866_36	748224.HMPREF9436_01463	78.6	1.6e-16	N/A	N/A
Pfam	UHGV-2030866_36	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-2030866_36	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-2030866_38	UniRef90_UPI0018CC2891	120.0	9.07e-32	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2030866_38	1235790.C805_00037	112.0	1.83e-29	N/A	N/A
structural_annotation	UHGV-2030866_38	PF04218	N/A	N/A	N/A	N/A
KOfam	UHGV-2030866_39	K06909	143.9	1.49939e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2030866_39	phrog_10250	174.4	0	N/A	unknown function
UniRef90	UHGV-2030866_39	UniRef90_A0A844D8I4	847.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2030866_39	411490.ANACAC_00783	491.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2030866_39	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-2030866_39	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-2030866_39	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2030866_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2030866_39	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_40	phrog_64	123.8	5.8e-37	portal protein	head and packaging
UniRef90	UHGV-2030866_40	UniRef90_A0A6N7TNT3	878.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2030866_40	1042156.CXIVA_01850	83.6	0.000000000000025	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-2030866_40	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2030866_40	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_43	phrog_2468	81.6	5.9e-24	head morphogenesis	head and packaging
UniRef90	UHGV-2030866_43	UniRef90_A0A6N7TLR7	637.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-2030866_43	1504822.CCNO01000013_gene286	110.0	6.02e-24	cell adhesion	N/A
Pfam	UHGV-2030866_43	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-2030866_43	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2030866_43	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_45	phrog_8680	198.7	0	N/A	unknown function
UniRef90	UHGV-2030866_45	UniRef90_A0A844D688	452.0	0	N/A	N/A
eggNOG-mapper	UHGV-2030866_45	1423790.BN53_04265	181.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-2030866_45	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-2030866_45	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2030866_45	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_47	phrog_5	50.7	0.000000000000044	tail completion or Neck1 protein	connector
UniRef90	UHGV-2030866_47	UniRef90_A0A6N7TNP6	295.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2030866_47	1123309.AQYB01000018_gene814	90.5	3.17e-21	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2030866_47	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2030866_47	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2030866_49	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_50	phrog_247	207.9	0	major head protein	head and packaging
UniRef90	UHGV-2030866_50	UniRef90_UPI001BA5448B	238.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-2030866_50	33035.JPJF01000106_gene3132	357.0	0	N/A	N/A
Pfam	UHGV-2030866_50	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-2030866_50	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_52	phrog_17977	41.5	0.000000000019	N/A	unknown function
UniRef90	UHGV-2030866_52	UniRef90_A0A844DHJ8	119.0	3.28e-32	Phage head closure protein	N/A
structural_annotation	UHGV-2030866_52	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2030866_53	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_54	phrog_885	61.4	1.2e-17	major tail protein	tail
eggNOG-mapper	UHGV-2030866_54	1111121.HMPREF1247_0789	117.0	1.62e-30	N/A	N/A
structural_annotation	UHGV-2030866_54	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_57	phrog_9959	103.1	1.7e-30	tail length tape measure protein	tail
UniRef90	UHGV-2030866_57	UniRef90_A0A6N7TLD3	1213.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-2030866_57	1492737.FEM08_12070	142.0	1.9e-32	tape measure	N/A
Pfam	UHGV-2030866_57	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-2030866_57	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-2030866_57	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2030866_57	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-2030866_58	UniRef90_A0A417QGC1	115.0	8.73e-28	MtfA protein	N/A
eggNOG-mapper	UHGV-2030866_58	1235792.C808_00094	98.6	5.47e-22	phage tail	N/A
COG	UHGV-2030866_58	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2030866_58	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_59	phrog_3558	206.2	0	tail protein	tail
UniRef90	UHGV-2030866_59	UniRef90_R9C6X0	65.1	0.000000192	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-2030866_59	610130.Closa_0754	67.8	0.00000000519	N/A	N/A
Pfam	UHGV-2030866_59	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-2030866_59	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2030866_59	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_60	phrog_9534	48.4	0.00000000000016	head protein	head and packaging
eggNOG-mapper	UHGV-2030866_60	748224.HMPREF9436_00405	136.0	9.85e-34	domain, Protein	N/A
COG	UHGV-2030866_60	COG5492	N/A	N/A	N/A	N/A
KOfam	UHGV-2030866_63	K07273	175.1	0	acm; lysozyme	N/A
PHROG	UHGV-2030866_63	phrog_291	129.3	3.4e-38	endolysin	lysis
UniRef90	UHGV-2030866_63	UniRef90_A0A564U0D3	361.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-2030866_63	718252.FP2_04890	228.0	0	hydrolase, family 25	N/A
Pfam	UHGV-2030866_63	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2030866_63	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2030866_63	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-2030866_65	phrog_15303	113.3	1.2e-33	N/A	unknown function
Pfam	UHGV-2030866_65	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
KOfam	UHGV-2030866_66	K05480	46.2	0.00000000000061	EDA; ectodysplasin-A	N/A
PHROG	UHGV-2030866_66	phrog_5073	53.2	0.0000000000000032	tail fiber protein	tail
UniRef90	UHGV-2030866_66	UniRef90_UPI0018835F0C	485.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-2030866_66	411483.FAEPRAA2165_00757	172.0	0	N/A	N/A
Pfam	UHGV-2030866_66	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-2030866_66	PF10651	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2030866	Yes	40,531	54	100	1
UHGV-0083458	No	40,531	54	100	1
UHGV-1364764	No	40,531	54	100	1
UHGV-0183310	No	39,493	54	100	1
UHGV-1364264	No	39,493	54	100	1
UHGV-0123857	No	50,373	54	100	1
UHGV-1601706	No	16,440	55	39	1