vOTU vOTU-001908

vOTU: vOTU-001908

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-001908
Number of genomes	10
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00627 → vGENUS-00599 → vSUBGEN-10695 → vOTU-001908
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900753285
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1372483
Biosample ID	SAMEA2737662
Genome length (bp)	52,784 bps
CheckV completeness	100.00% (Complete)
CDS count	91
CDS density	89.86%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900753285	Total connections	71	Host agreement	91.55
PHIST-predicted host lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Bacteroidaceae → UBA6398 → UBA6398 sp003150315	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1372483_1	1378168.N510_03079	92.8	3.42e-20	N/A	N/A
eggNOG-mapper	UHGV-1372483_2	1408437.JNJN01000043_gene802	154.0	0	N/A	N/A
PHROG	UHGV-1372483_3	phrog_16490	77.1	5.8e-40	N/A	unknown function
eggNOG-mapper	UHGV-1372483_3	1408437.JNJN01000043_gene803	126.0	2.42e-32	N/A	N/A
eggNOG-mapper	UHGV-1372483_5	1408437.JNJN01000043_gene805	68.2	0.000000000000608	N/A	N/A
eggNOG-mapper	UHGV-1372483_7	1122921.KB898212_gene2740	55.1	0.0000000165	N/A	N/A
KOfam	UHGV-1372483_9	K19304	98.3	9.3e-29	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1372483_9	phrog_7767	94.4	7.5e-28	metallo-endopeptidase	other
UniRef90	UHGV-1372483_9	UniRef90_A0A1E1VI95	81.3	0.0000000000000587	Muramidase	N/A
eggNOG-mapper	UHGV-1372483_9	1158601.I585_02846	97.4	6.9e-19	Peptidase family M23	N/A
Pfam	UHGV-1372483_9	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-1372483_9	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-1372483_9	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1372483_9	PF01551,PF09992,NF040883,COG0739,COG3698	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_10	phrog_4105	97.5	8.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-1372483_10	397288.C806_00056	98.6	2.6e-25	N/A	N/A
PHROG	UHGV-1372483_12	phrog_13589	49.5	1.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1372483_12	411471.SUBVAR_06929	257.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1372483_12	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-1372483_13	PF10651	N/A	N/A	N/A	N/A
KOfam	UHGV-1372483_15	K06882	75.8	2.4e-22	N/A	N/A
PHROG	UHGV-1372483_15	phrog_6616	97.3	1.3e-28	tail protein	tail
eggNOG-mapper	UHGV-1372483_15	1226322.HMPREF1545_00064	69.7	0.00000000368	N/A	N/A
PHROG	UHGV-1372483_16	phrog_1194	83.3	2.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-1372483_16	1122919.KB905559_gene1345	54.3	0.000000105	N/A	N/A
Pfam	UHGV-1372483_16	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1372483_16	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_17	phrog_1535	67.9	1e-19	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1372483_17	1123263.AUKY01000015_gene1620	119.0	1.35e-24	Phage tail tape measure protein TP901	N/A
COG	UHGV-1372483_17	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1372483_18	1121333.JMLH01000047_gene1011	68.2	0.0000000000017	N/A	N/A
eggNOG-mapper	UHGV-1372483_19	1211844.CBLM010000023_gene988	59.3	0.000000000775	N/A	N/A
Pfam	UHGV-1372483_19	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1372483_19	PF16478	N/A	N/A	N/A	N/A
UniRef90	UHGV-1372483_20	UniRef90_UPI001A9B3C90	91.3	1.07e-20	phage tail protein	N/A
structural_annotation	UHGV-1372483_20	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372483_21	469596.HMPREF9488_01309	52.8	0.000000563	N/A	N/A
structural_annotation	UHGV-1372483_21	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372483_23	1298920.KI911353_gene2656	73.2	0.00000000000001	N/A	N/A
UniRef90	UHGV-1372483_24	UniRef90_A0A845R6M6	109.0	3.34e-29	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1372483_24	1298920.KI911353_gene2658	55.8	0.0000000102	N/A	N/A
structural_annotation	UHGV-1372483_24	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_26	phrog_29	193.5	0	major head protein	head and packaging
UniRef90	UHGV-1372483_26	UniRef90_A0A2Z4QBB4	407.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-1372483_26	1262449.CP6013_2085	256.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1372483_26	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1372483_26	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_29	phrog_115	54.5	0.0000000000000024	minor head protein	head and packaging
eggNOG-mapper	UHGV-1372483_29	278197.PEPE_0506	64.3	0.000000000171	Phage Mu protein F like protein	N/A
Pfam	UHGV-1372483_29	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1372483_29	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
structural_annotation	UHGV-1372483_29	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_30	phrog_64	198.5	0	portal protein	head and packaging
UniRef90	UHGV-1372483_30	UniRef90_A0A845RCM8	415.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1372483_30	1123263.AUKY01000015_gene1609	316.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1372483_30	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1372483_30	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_32	phrog_38	164.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1372483_32	UniRef90_A0A843GZU6	597.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1372483_32	476272.RUMHYD_01940	427.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1372483_32	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1372483_32	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372483_32	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-1372483_33	UniRef90_A0A521SZN7	82.0	3.54e-17	Ribonuclease H	N/A
eggNOG-mapper	UHGV-1372483_33	1123388.AQWU01000067_gene621	80.5	5.16e-17	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
COG	UHGV-1372483_33	COG0328	N/A	N/A	Ribonuclease HI	N/A
Pfam	UHGV-1372483_34	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-1372483_35	phrog_13890	51.2	0.000000000000011	N/A	unknown function
UniRef90	UHGV-1372483_35	UniRef90_UPI001C02959C	53.9	0.000000164	N/A	N/A
structural_annotation	UHGV-1372483_35	COG4226	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372483_39	PF19129,NF007348,COG5569	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_44	phrog_25567	50.8	0.000000000000022	N/A	unknown function
structural_annotation	UHGV-1372483_44	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372483_45	760568.Desku_0919	64.3	0.000000000145	N/A	N/A
structural_annotation	UHGV-1372483_45	PF03787,TIGR01898,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-1372483_49	K18830	48.6	0.00000000000017	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1372483_49	phrog_8	43.6	0.0000000000036	transcriptional regulator	transcription regulation
UniRef90	UHGV-1372483_49	UniRef90_UPI00156FD326	104.0	2.47e-26	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1372483_49	1235790.C805_00012	91.7	3.84e-22	Helix-turn-helix domain	N/A
Pfam	UHGV-1372483_49	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1372483_49	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1372483_49	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1372483_51	K07741	195.4	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1372483_51	phrog_63	168.5	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1372483_51	UniRef90_A0A1C6EMR2	320.0	0	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-1372483_51	386415.NT01CX_2199	303.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-1372483_51	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1372483_51	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1372483_51	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1372483_51	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-1372483_54	K10906	75.7	5.9e-27	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-1372483_54	phrog_412	219.2	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1372483_54	UniRef90_A0A011UJY5	221.0	0	N/A	N/A
eggNOG-mapper	UHGV-1372483_54	1242969.ATCC51562_1602	145.0	1.37e-39	N/A	N/A
Pfam	UHGV-1372483_54	PF12684	N/A	N/A	N/A	DUF3799
structural_annotation	UHGV-1372483_54	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_55	phrog_3657	352.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1372483_55	470.IX87_10630	248.0	0	N/A	N/A
PHROG	UHGV-1372483_56	phrog_3490	129.0	3e-38	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1372483_56	UniRef90_A0A1C6FNL5	137.0	1.22e-38	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1372483_56	357809.Cphy_2986	128.0	9.13e-36	N/A	N/A
Pfam	UHGV-1372483_56	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1372483_56	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372483_58	PF13744,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_59	phrog_270	92.1	8.4e-27	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1372483_59	1423724.BAMM01000020_gene1808	73.9	0.00000000000221	N/A	N/A
COG	UHGV-1372483_59	COG3756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372483_59	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1372483_60	K02315	156.5	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1372483_60	phrog_50	149.6	2.10195e-44	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1372483_60	UniRef90_R6WX70	201.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1372483_60	1321784.HMPREF1987_01633	179.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1372483_60	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-1372483_60	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-1372483_60	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1372483_60	PF01695,MF_01158,NF005992,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-1372483_66	K01520	129.3	3.3e-38	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1372483_66	phrog_135	114.3	9e-34	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1372483_66	UniRef90_R6ILQ3	146.0	1.34945e-42	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-1372483_66	1282887.AUJG01000016_gene1113	140.0	8.38999e-40	N/A	N/A
Pfam	UHGV-1372483_66	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1372483_66	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1372483_66	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1372483_66	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_67	phrog_4652	99.9	1.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-1372483_67	397290.C810_01459	205.0	0	N/A	N/A
structural_annotation	UHGV-1372483_67	TIGR02582	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_68	phrog_15946	66.0	7.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1372483_68	1041147.AUFB01000014_gene330	72.0	0.000000000000114	N/A	N/A
UniRef90	UHGV-1372483_69	UniRef90_A0A098GES5	92.4	9.55e-22	Putative phage associated protein	N/A
structural_annotation	UHGV-1372483_69	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372483_71	PF04319,PF08962	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_73	phrog_9300	44.2	0.0000000000016	N/A	unknown function
UniRef90	UHGV-1372483_73	UniRef90_F2F2I1	80.5	0.000000000000011	Predicted ATPase	N/A
structural_annotation	UHGV-1372483_74	PF06289,COG1582	N/A	N/A	N/A	N/A
KOfam	UHGV-1372483_76	K07451	65.2	8.1e-19	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1372483_76	phrog_1271	70.6	2.9e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1372483_76	UniRef90_UPI001A90E773	119.0	9.55e-30	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1372483_76	1158609.I586_02595	115.0	3.71e-29	HNH nucleases	N/A
Pfam	UHGV-1372483_76	PF09889	N/A	N/A	N/A	DUF2116
Pfam	UHGV-1372483_76	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1372483_76	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1372483_76	PF01844,NF008448,COG1403	N/A	N/A	N/A	N/A
KOfam	UHGV-1372483_85	K01160	47.1	0.00000000000067	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1372483_85	phrog_4632	47.1	0.000000000000043	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1372483_85	UniRef90_A0A1V5ZUM0	110.0	1.31e-28	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1372483_85	556263.FSEG_00477	68.2	0.000000000000451	N/A	N/A
structural_annotation	UHGV-1372483_85	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_86	phrog_474	78.8	1.2e-22	phosphofructokinase	other
UniRef90	UHGV-1372483_86	UniRef90_UPI00195F5FF7	94.4	5.12e-23	N/A	N/A
eggNOG-mapper	UHGV-1372483_86	861454.HMPREF9099_00538	75.1	3e-16	N/A	N/A
Pfam	UHGV-1372483_86	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-1372483_86	PF19905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372483_90	PF20063,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-1372483_91	phrog_4402	156.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1372483_91	UniRef90_A0A3A9E5A5	189.0	0	RepB family plasmid replication initiator protein	N/A
eggNOG-mapper	UHGV-1372483_91	1395513.P343_18240	167.0	0	Protein involved in initiation of plasmid replication	N/A
Pfam	UHGV-1372483_91	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-1372483_91	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-1372483_91	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-1372483_91	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1372483	Yes	52,784	47	100	1
UHGV-0074146	No	52,784	47	100	1
UHGV-0075180	No	52,784	47	100	1
UHGV-0181356	No	52,762	47	100	1
UHGV-2040991	No	52,883	47	100	1
UHGV-0195322	No	34,981	46	68	1
UHGV-2053665	No	22,047	47	43	1
UHGV-2053670	No	16,904	46	32	1
UHGV-1783514	No	10,997	47	21	1
UHGV-2044945	No	10,028	46	19	1