vOTU vOTU-002008

vOTU: vOTU-002008

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-002008
Number of genomes	144
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_D → Ruminococcus_D bicirculans
Taxonomy (UHGV)	vFAM-00145 → vSUBFAM-00398 → vGENUS-15161 → vSUBGEN-26181 → vOTU-002008
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_D → Ruminococcus_D bicirculans
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1347554
Biosample ID	N/A
Genome length (bp)	7,220 bps
CheckV completeness	100.00% (Complete)
CDS count	12
CDS density	81.32%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_D → Ruminococcus_D bicirculans	Total connections	92	Host agreement	94.57
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_D → Ruminococcus_D bicirculans	Total connections	968	Host agreement	96.49

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1347554_1	K10954	61.3	2e-17	zot; zona occludens toxin	N/A
PHROG	UHGV-1347554_1	phrog_197	51.9	0.000000000000016	Zot-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1347554_1	UniRef90_A0A356CVZ1	528.0	0	Zot domain-containing protein	N/A
eggNOG-mapper	UHGV-1347554_1	1158610.UC3_01109	65.9	0.000000000612	N/A	N/A
Pfam	UHGV-1347554_1	PF05707	N/A	N/A	Zonular occludens toxin (Zot)	Zot
PHROG	UHGV-1347554_3	phrog_3180	43.2	0.0000000000053	Arc-like repressor	transcription regulation
UniRef90	UHGV-1347554_3	UniRef90_A0A5J5HFE5	50.8	0.000000191	Ribbon-helix-helix domain-containing protein	N/A
Pfam	UHGV-1347554_3	PF19891	N/A	N/A	N/A	DUF6364
structural_annotation	UHGV-1347554_3	PF19891,NF041793,COG4877	N/A	N/A	N/A	N/A
KOfam	UHGV-1347554_5	K07497	49.5	0.000000000000082	K07497; putative transposase	N/A
PHROG	UHGV-1347554_5	phrog_8463	94.6	1e-27	transposase	integration and excision
UniRef90	UHGV-1347554_5	UniRef90_A0A356CVG8	645.0	0	IS481 family transposase	N/A
eggNOG-mapper	UHGV-1347554_5	411489.CLOL250_01489	349.0	0	COG COG2801 Transposase and inactivated derivatives	N/A
Pfam	UHGV-1347554_5	PF00665	N/A	N/A	Integrase core domain	rve
Pfam	UHGV-1347554_5	PF13683	N/A	N/A	Integrase core domain	rve_3
COG	UHGV-1347554_5	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-1347554_5	PF00665,PF13518,NF033577,COG2801	N/A	N/A	N/A	N/A
UniRef90	UHGV-1347554_6	UniRef90_R6T919	686.0	0	Putative replication protein	N/A
eggNOG-mapper	UHGV-1347554_6	650150.ERH_1292	229.0	0	Putative viral replication protein	N/A
Pfam	UHGV-1347554_6	PF02407	N/A	N/A	Putative viral replication protein	Viral_Rep
Pfam	UHGV-1347554_6	PF00910	N/A	N/A	RNA helicase	RNA_helicase
structural_annotation	UHGV-1347554_6	PF02407,PF00519,MF_04000,TIGR01650,COG0606	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1347554	Yes	7,220	38	100	1
UHGV-1277160	No	7,220	38	100	1
UHGV-1299607	No	7,220	38	100	1
UHGV-1303303	No	7,220	38	100	1
UHGV-0075817	No	51,392	42	100	1
UHGV-2104567	No	49,745	42	100	1
UHGV-2016917	No	49,525	42	100	1
UHGV-0054649	No	49,274	42	100	1
UHGV-0135673	No	47,002	42	100	1
UHGV-2152470	No	45,502	42	100	1
UHGV-2166343	No	45,005	42	100	1
UHGV-1537831	No	44,671	42	100	1
UHGV-0155681	No	43,994	42	100	1
UHGV-1505477	No	43,419	42	100	1
UHGV-1541770	No	42,779	42	100	1
UHGV-1999168	No	41,856	42	100	1
UHGV-2155161	No	41,417	42	100	1
UHGV-1913000	No	41,153	42	100	1
UHGV-1979800	No	11,747	39	100	1
UHGV-1297101	No	7,206	38	100	1
UHGV-2037688	No	7,036	37	100	1
UHGV-2073458	No	7,036	37	100	1
UHGV-2136030	No	7,036	37	100	1
UHGV-1940380	No	6,995	38	100	1
UHGV-2121167	No	6,967	37	100	1
UHGV-2184758	No	6,026	38	100	1
UHGV-2221597	No	5,099	37	96	1
UHGV-1943335	No	33,280	44	94	1
UHGV-1386411	No	31,486	44	89	1
UHGV-0072122	No	33,261	42	88	1
UHGV-2230191	No	4,702	38	88	1
UHGV-2009745	No	3,549	38	85	1
UHGV-1520284	No	31,679	42	84	1
UHGV-1396524	No	3,344	39	84	1
UHGV-1324635	No	5,133	38	82	1
UHGV-1967898	No	30,523	43	81	1
UHGV-1959875	No	30,287	44	81	1
UHGV-1484438	No	3,175	39	80	1
UHGV-1923127	No	29,774	43	79	1
UHGV-2208498	No	4,145	38	79	1
UHGV-2010230	No	4,194	37	79	1
UHGV-1959115	No	29,357	44	78	1
UHGV-1400597	No	3,240	38	78	1
UHGV-1933605	No	28,448	41	76	1
UHGV-2017143	No	27,979	44	74	1
UHGV-0093101	No	27,783	44	74	1
UHGV-1995538	No	27,545	44	73	1
UHGV-2175405	No	27,524	44	73	1
UHGV-1310139	No	2,029	38	73	1
UHGV-2227097	No	26,895	44	72	1
UHGV-2122061	No	26,238	44	70	1
UHGV-2177829	No	25,716	43	68	1
UHGV-2190271	No	4,305	37	68	1
UHGV-1511370	No	25,269	41	67	1
UHGV-2026695	No	24,727	43	66	1
UHGV-0128299	No	24,660	44	66	1
UHGV-2106894	No	24,642	44	66	1
UHGV-2018438	No	24,617	44	65	1
UHGV-1301153	No	3,472	38	65	1
UHGV-1992425	No	24,545	44	65	1
UHGV-0298677	No	23,128	46	65	1
UHGV-2076840	No	24,527	43	65	1
UHGV-1899666	No	24,479	44	65	1
UHGV-2171103	No	24,342	43	65	1
UHGV-2085137	No	24,340	43	65	1
UHGV-1313762	No	24,134	43	64	1
UHGV-2050192	No	4,035	37	64	1
UHGV-2148765	No	23,940	44	64	1
UHGV-0078648	No	23,933	43	64	1
UHGV-1462660	No	23,801	42	63	1
UHGV-2194780	No	23,761	44	63	1
UHGV-2094847	No	23,755	43	63	1
UHGV-1456584	No	3,310	38	62	1
UHGV-1456586	No	3,310	39	62	1
UHGV-1442510	No	3,029	38	62	1
UHGV-1420187	No	23,122	43	62	1
UHGV-1933383	No	23,066	44	61	1
UHGV-2151319	No	22,895	44	61	1
UHGV-1931154	No	22,889	43	61	1
UHGV-1989066	No	22,868	44	61	1
UHGV-2000767	No	22,868	44	61	1
UHGV-2237585	No	22,777	44	61	1
UHGV-2162880	No	22,627	44	60	1
UHGV-0053099	No	22,303	43	59	1
UHGV-1384793	No	22,201	41	59	1
UHGV-2010234	No	2,427	38	58	1
UHGV-1538588	No	21,759	43	58	1
UHGV-2225373	No	20,270	42	54	1
UHGV-2126344	No	20,149	43	54	1
UHGV-0146323	No	19,938	41	53	1
UHGV-1485637	No	19,733	42	52	1
UHGV-1976026	No	19,547	44	52	1
UHGV-2240857	No	19,443	43	52	1
UHGV-0126510	No	18,017	43	51	1
UHGV-2196068	No	19,076	44	51	1
UHGV-1975274	No	18,990	44	51	1
UHGV-1443641	No	18,805	42	50	1
UHGV-1318721	No	5,974	38	49	1
UHGV-0114203	No	18,038	44	48	1
UHGV-0374082	No	16,664	41	46	1
UHGV-1562412	No	16,423	43	44	1
UHGV-2215229	No	16,176	43	43	1
UHGV-1322794	No	5,549	38	43	1
UHGV-1808440	No	15,923	45	42	1
UHGV-2008440	No	15,845	40	42	1
UHGV-2174488	No	16,811	42	41	1
UHGV-0277445	No	15,454	40	41	1
UHGV-0289060	No	15,281	40	41	1
UHGV-1935316	No	7,209	39	41	1
UHGV-2005887	No	15,214	43	40	1
UHGV-2010279	No	15,081	45	40	1
UHGV-1834270	No	14,943	43	40	1
UHGV-1316214	No	6,392	38	39	1
UHGV-1692347	No	14,322	43	38	1
UHGV-2226013	No	14,059	45	37	1
UHGV-0163560	No	13,909	43	37	1
UHGV-2019333	No	13,793	45	37	1
UHGV-2216829	No	13,667	44	36	1
UHGV-2148418	No	13,622	44	36	1
UHGV-1728553	No	13,379	43	36	1
UHGV-0066615	No	13,224	44	35	1
UHGV-0048277	No	13,143	44	35	1
UHGV-2147929	No	13,057	42	35	1
UHGV-2221939	No	5,651	38	34	1
UHGV-1669556	No	12,575	43	33	1
UHGV-1959711	No	12,488	45	33	1
UHGV-1561317	No	11,874	44	32	1
UHGV-2020202	No	11,860	44	32	1
UHGV-1999378	No	11,736	44	31	1
UHGV-1286755	No	11,386	42	31	1
UHGV-1658762	No	11,295	42	31	1
UHGV-1780570	No	11,135	42	30	1
UHGV-1947904	No	11,026	45	29	1
UHGV-1787631	No	10,981	42	29	1
UHGV-1054000	No	10,921	44	29	1
UHGV-2178726	No	10,851	44	29	1
UHGV-1279895	No	10,841	44	29	1
UHGV-1613006	No	10,457	44	28	1
UHGV-2134091	No	10,420	43	28	1
UHGV-2167013	No	10,294	41	27	1
UHGV-2148940	No	10,039	45	27	1
UHGV-2137200	No	10,034	45	27	1
UHGV-0059802	No	20,058	42	26	1
UHGV-2070783	No	5,650	37	25	1