vOTU vOTU-002256

vOTU: vOTU-002256

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-002256
Number of genomes	10
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00950 → vGENUS-17276 → vSUBGEN-31941 → vOTU-002256
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0029710
Biosample ID	SAMEA4765572
Genome length (bp)	41,266 bps
CheckV completeness	100.00% (Complete)
CDS count	67
CDS density	92.75%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	21	Host agreement	80.95
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0029710_2	397290.C810_01103	77.4	0.0000000000000041	N/A	N/A
PHROG	UHGV-0029710_3	phrog_355	71.6	1.1e-20	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029710_3	UniRef90_A0A413FXK8	115.0	1.65e-31	N/A	N/A
eggNOG-mapper	UHGV-0029710_3	1005994.GTGU_01487	73.2	0.00000000000000105	N/A	N/A
Pfam	UHGV-0029710_3	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0029710_3	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0029710_3	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_4	phrog_38832	58.0	1.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0029710_4	445972.ANACOL_00165	55.1	0.000000665	N/A	N/A
structural_annotation	UHGV-0029710_7	PF20111,NF033202	N/A	N/A	N/A	N/A
KOfam	UHGV-0029710_8	K01520	145.7	3.19496e-43	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0029710_8	phrog_135	127.1	9.9e-38	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029710_8	UniRef90_A0A3D3Y5Q7	233.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0029710_8	887929.HMP0721_1278	127.0	6.66e-36	dUTPase	N/A
Pfam	UHGV-0029710_8	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0029710_8	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0029710_8	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0029710_8	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029710_9	UniRef90_UPI0019D1E2CF	250.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0029710_9	1410632.JHWW01000006_gene695	187.0	0	N/A	N/A
Pfam	UHGV-0029710_9	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0029710_9	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_10	phrog_1770	51.6	0.000000000000018	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0029710_10	536233.CLO_1822	147.0	8.54792e-43	N/A	N/A
structural_annotation	UHGV-0029710_10	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_11	phrog_36	76.8	2.9e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0029710_11	UniRef90_UPI000490E1E4	69.7	0.00000000000188	N/A	N/A
eggNOG-mapper	UHGV-0029710_11	1123075.AUDP01000020_gene1515	59.3	0.00000000328	sigma factor activity	N/A
COG	UHGV-0029710_11	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0029710_11	PF07374,MF_00245,TIGR02980,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0029710_12	K07319	117.0	1.7e-34	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0029710_12	phrog_498	429.7	0	DNA methyltransferase	other
UniRef90	UHGV-0029710_12	UniRef90_UPI0012DE0D94	443.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0029710_12	1423758.BN55_01455	416.0	0	DNA methylase	N/A
PADLOC	UHGV-0029710_12	MTase_II_00015	231.7	0	Type II methyltransferase	RM
Pfam	UHGV-0029710_12	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0029710_12	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0029710_12	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0029710_12	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0029710_14	K06909	116.1	3.5e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0029710_14	phrog_10250	128.3	4.4e-38	N/A	unknown function
UniRef90	UHGV-0029710_14	UniRef90_A0A1I3QR69	465.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0029710_14	748224.HMPREF9436_03341	348.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0029710_14	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0029710_14	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0029710_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0029710_14	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_16	phrog_533	208.5	0	portal protein	head and packaging
UniRef90	UHGV-0029710_16	UniRef90_UPI000680A1DB	533.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0029710_16	693746.OBV_18040	393.0	0	N/A	N/A
structural_annotation	UHGV-0029710_16	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_17	phrog_581	225.9	0	minor head protein	head and packaging
UniRef90	UHGV-0029710_17	UniRef90_UPI0006814CA4	497.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0029710_17	693746.OBV_18050	516.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0029710_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0029710_17	PF18810	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	PBECR2
COG	UHGV-0029710_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029710_17	PF06152,PF15542,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_18	phrog_194	76.6	4e-22	head scaffolding protein	head and packaging
UniRef90	UHGV-0029710_18	UniRef90_UPI00164D9F94	177.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0029710_18	693746.OBV_18080	149.0	2.88667e-43	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0029710_18	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0029710_18	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_19	phrog_247	299.1	0	major head protein	head and packaging
UniRef90	UHGV-0029710_19	UniRef90_UPI00195A9CE5	614.0	0	phage coat protein	N/A
eggNOG-mapper	UHGV-0029710_19	1121344.JHZO01000003_gene972	553.0	0	N/A	N/A
COG	UHGV-0029710_19	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-0029710_19	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_20	phrog_541	68.1	1.1e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-0029710_20	693746.OBV_18110	101.0	2.59e-26	N/A	N/A
structural_annotation	UHGV-0029710_21	PF20536,MF_01370,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_22	phrog_556	69.9	3e-20	minor head protein	head and packaging
UniRef90	UHGV-0029710_22	UniRef90_A0A4R1QRE8	112.0	7.97e-29	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0029710_22	33035.JPJF01000106_gene3128	75.9	0.00000000000000265	N/A	N/A
Pfam	UHGV-0029710_22	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0029710_22	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_23	phrog_3266	59.3	5.9e-17	tail completion	connector
eggNOG-mapper	UHGV-0029710_23	693746.OBV_18140	216.0	0	N/A	N/A
structural_annotation	UHGV-0029710_23	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_24	phrog_3099	84.7	1.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-0029710_24	693746.OBV_18150	255.0	0	N/A	N/A
structural_annotation	UHGV-0029710_24	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_25	phrog_11299	87.1	2.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0029710_25	693746.OBV_18160	156.0	0	N/A	N/A
structural_annotation	UHGV-0029710_25	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_26	phrog_706	116.0	2.6e-34	N/A	unknown function
UniRef90	UHGV-0029710_26	UniRef90_UPI000682A80B	211.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0029710_26	693746.OBV_18170	197.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0029710_26	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0029710_26	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_27	phrog_1535	119.4	1.8e-35	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0029710_27	693746.OBV_18190	186.0	0	domain protein	N/A
COG	UHGV-0029710_27	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029710_27	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_28	phrog_1194	95.5	3.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-0029710_28	1305708.M9Q2F8_9CAUD	56.6	0.0000000114	N/A	N/A
Pfam	UHGV-0029710_28	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0029710_28	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_29	phrog_32308	75.7	6.2e-23	N/A	unknown function
UniRef90	UHGV-0029710_29	UniRef90_A0A856HZ25	196.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0029710_29	1235797.C816_04179	145.0	1.69e-34	Chaperone of endosialidase	N/A
Pfam	UHGV-0029710_29	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0029710_32	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_33	phrog_31538	41.7	0.000000000024	N/A	unknown function
PHROG	UHGV-0029710_34	phrog_13589	145.6	2.49431e-43	N/A	unknown function
eggNOG-mapper	UHGV-0029710_34	428125.CLOLEP_01434	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-0029710_35	428125.CLOLEP_01435	56.6	0.0000000061	N/A	N/A
PHROG	UHGV-0029710_39	phrog_13256	61.7	6.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0029710_39	1226322.HMPREF1545_00166	76.3	2.27e-17	N/A	N/A
KOfam	UHGV-0029710_40	K01447	117.2	1.7e-34	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0029710_40	phrog_1794	114.0	9.9e-34	amidase	lysis
UniRef90	UHGV-0029710_40	UniRef90_A0A3D4VSU2	175.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0029710_40	397290.C810_00440	145.0	6.83e-38	Ami_2	N/A
Pfam	UHGV-0029710_40	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0029710_40	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0029710_40	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029710_41	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029710_42	UniRef90_UPI00164AED9E	83.2	2.19e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0029710_42	1235798.C817_04600	61.6	0.0000000000972	N/A	N/A
structural_annotation	UHGV-0029710_42	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029710_46	UniRef90_A0A7M1RTM1	83.6	5.78e-17	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0029710_46	1378168.N510_03079	68.9	0.00000000000845	N/A	N/A
KOfam	UHGV-0029710_47	K14059	119.8	3.3e-35	int; integrase	N/A
PHROG	UHGV-0029710_47	phrog_1	129.1	4.5e-38	integrase	integration and excision
UniRef90	UHGV-0029710_47	UniRef90_A0A2Z4QB94	312.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0029710_47	641112.ACOK01000111_gene1860	122.0	6.84e-29	Phage integrase family	N/A
Pfam	UHGV-0029710_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0029710_47	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0029710_47	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0029710_48	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0029710_48	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_49	phrog_5319	50.3	0.000000000000024	outer membrane protein	other
eggNOG-mapper	UHGV-0029710_49	471855.Shel_26310	80.9	0.00000000000000404	sh3 domain protein	N/A
Pfam	UHGV-0029710_49	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
COG	UHGV-0029710_49	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029710_49	PF03843,MF_01959,TIGR00752,NF041910,COG3390	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_51	phrog_18248	58.3	1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0029710_51	UniRef90_UPI000B8780CC	71.6	0.000000000000132	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0029710_51	1589749.A0A0B5A036_9CAUD	69.3	0.00000000000153	sequence-specific DNA binding	N/A
Pfam	UHGV-0029710_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0029710_52	phrog_8	52.8	0.0000000000000089	transcriptional regulator	transcription regulation
UniRef90	UHGV-0029710_52	UniRef90_N9XN14	74.3	4.15e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0029710_52	1449336.JQLO01000001_gene2237	69.7	0.0000000000000147	Transcriptional regulator, Cro CI family	N/A
Pfam	UHGV-0029710_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0029710_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0029710_52	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029710_53	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_58	phrog_124	111.9	5.4e-33	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029710_58	UniRef90_A0A2Z4QBI4	387.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-0029710_58	445972.ANACOL_00146	220.0	0	AAA domain	N/A
Pfam	UHGV-0029710_58	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0029710_58	COG1100	N/A	N/A	GTPase SAR1 family domain	N/A
structural_annotation	UHGV-0029710_58	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029710_59	UniRef90_A0A2Z4QA33	247.0	0	PD-(D/E)XK nuclease	N/A
eggNOG-mapper	UHGV-0029710_59	718252.FP2_01050	124.0	1.26e-32	N/A	N/A
structural_annotation	UHGV-0029710_59	PF10926,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_60	phrog_378	87.2	2.2e-25	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029710_60	UniRef90_UPI001E43F9BA	79.7	6.15e-16	N/A	N/A
eggNOG-mapper	UHGV-0029710_60	1154757.Q5C_06005	62.4	0.00000000101	N/A	N/A
Pfam	UHGV-0029710_60	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0029710_60	PF05037,NF004948	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_61	phrog_15768	107.3	1.8e-31	N/A	unknown function
UniRef90	UHGV-0029710_61	UniRef90_A0A417QFV0	149.0	7.30006e-41	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0029710_61	203119.Cthe_2466	177.0	0	N/A	N/A
structural_annotation	UHGV-0029710_61	PF10771,NF041413,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0029710_62	K02315	106.2	3.7e-31	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0029710_62	phrog_50	94.1	1.7e-27	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029710_62	UniRef90_A0A4Z0Y679	229.0	0	DNA replication protein DnaC	N/A
eggNOG-mapper	UHGV-0029710_62	445972.ANACOL_01829	201.0	0	N/A	N/A
Pfam	UHGV-0029710_62	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0029710_62	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0029710_62	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029710_63	UniRef90_A0A1C6GBI4	77.0	0.0000000000000258	DNA polymerase III subunit beta	N/A
structural_annotation	UHGV-0029710_63	PF02767,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029710_64	UniRef90_A0A098GES5	98.2	1.08e-24	Putative phage associated protein	N/A
structural_annotation	UHGV-0029710_64	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0029710_67	phrog_9298	63.2	3.3e-18	radical SAM domain protein	other
UniRef90	UHGV-0029710_67	UniRef90_D4C6F1	313.0	0	Elp3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0029710_67	742817.HMPREF9449_01796	297.0	0	radical SAM domain protein	N/A
COG	UHGV-0029710_67	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0029710_67	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0029710	Yes	41,266	52	100	1
UHGV-0010929	No	41,266	52	100	1
UHGV-0011114	No	41,266	52	100	1
UHGV-0011665	No	41,266	52	100	1
UHGV-0034800	No	41,266	52	100	1
UHGV-0012831	No	40,235	52	100	1
UHGV-0011751	No	40,209	52	100	1
UHGV-0013895	No	31,450	53	81	1
UHGV-0018194	No	26,619	52	68	1
UHGV-0010357	No	20,191	52	52	1