vOTU vOTU-002338

vOTU: vOTU-002338

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-002338
Number of genomes	4
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00026 → vSUBFAM-03481 → vGENUS-14894 → vSUBGEN-25466 → vOTU-002338
Host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-273 → MGYG000004477
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1364235
Biosample ID	SAMN00037072
Genome length (bp)	32,239 bps
CheckV completeness	100.00% (Complete)
CDS count	51
CDS density	89.14%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-273 → MGYG000004477	Total connections	1	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1364235_1	phrog_424	88.2	8.2e-26	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1364235_1	UniRef90_A0A352DQ80	246.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1364235_1	1280696.ATVY01000096_gene1971	200.0	0	N/A	N/A
Pfam	UHGV-1364235_1	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1364235_1	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
UniRef90	UHGV-1364235_9	UniRef90_W1I7V7	51.2	0.000000584	Uncultured bacterium plasmid pRGF00143	N/A
PHROG	UHGV-1364235_10	phrog_12	191.3	0	portal protein	head and packaging
UniRef90	UHGV-1364235_10	UniRef90_A0A075KQ80	490.0	0	Putative portal protein	N/A
eggNOG-mapper	UHGV-1364235_10	508419.F8J160_9CAUD	491.0	0	Phage portal protein	N/A
Pfam	UHGV-1364235_10	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1364235_10	TIGR01537.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1364235_10	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1364235_11	K06904	102.1	6.8e-30	N/A	N/A
PHROG	UHGV-1364235_11	phrog_80	109.5	4.1e-32	head maturation protease	head and packaging
UniRef90	UHGV-1364235_11	UniRef90_A0A843HVM4	219.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1364235_11	508419.F8J161_9CAUD	201.0	0	peptidase activity	N/A
Pfam	UHGV-1364235_11	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1364235_11	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
structural_annotation	UHGV-1364235_11	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_12	phrog_10	197.5	0	major head protein	head and packaging
UniRef90	UHGV-1364235_12	UniRef90_A0A843HQ06	457.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1364235_12	1399942.U3PDR8_9CAUD	431.0	0	peptidase activity	N/A
Pfam	UHGV-1364235_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1364235_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1364235_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_13	phrog_6865	55.0	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1364235_13	1399942.U3PBG9_9CAUD	49.3	0.000000253	N/A	N/A
UniRef90	UHGV-1364235_14	UniRef90_UPI001BA8BAD6	112.0	2.06e-30	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1364235_14	1399942.U3PCS3_9CAUD	108.0	1.63e-29	N/A	N/A
NCBIFam	UHGV-1364235_14	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1364235_14	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_15	phrog_25	57.2	2.6e-16	head closure Hc1	connector
UniRef90	UHGV-1364235_15	UniRef90_A0A843I196	127.0	4.11e-36	Phage head closure protein	N/A
eggNOG-mapper	UHGV-1364235_15	508419.F8J165_9CAUD	109.0	1.64e-29	Phage head-tail joining protein	N/A
Pfam	UHGV-1364235_15	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1364235_15	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1364235_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1364235_16	UniRef90_A0A843HUI9	140.0	3.4e-40	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1364235_16	508419.F8J166_9CAUD	116.0	1.12e-31	N/A	N/A
structural_annotation	UHGV-1364235_16	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_17	phrog_78	42.6	0.0000000000097	tail terminator	connector
eggNOG-mapper	UHGV-1364235_17	1399942.U3PDS3_9CAUD	104.0	2.4e-27	N/A	N/A
structural_annotation	UHGV-1364235_17	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_18	phrog_88	112.0	3.4e-33	major tail protein	tail
UniRef90	UHGV-1364235_18	UniRef90_A0A075KJR8	193.0	0	Putative major tail protein	N/A
eggNOG-mapper	UHGV-1364235_18	1399942.U3PBH4_9CAUD	193.0	0	N/A	N/A
Pfam	UHGV-1364235_18	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
NCBIFam	UHGV-1364235_18	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1364235_18	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_19	phrog_2115	52.4	0.00000000000001	tail protein	tail
eggNOG-mapper	UHGV-1364235_19	1399942.U3PCS7_9CAUD	119.0	2.61e-33	N/A	N/A
structural_annotation	UHGV-1364235_19	PF11836	N/A	N/A	N/A	N/A
KOfam	UHGV-1364235_20	K10398	42.9	0.0000000000033	KIF11, EG5; kinesin family member 11	N/A
PHROG	UHGV-1364235_20	phrog_5218	313.9	0	N/A	unknown function
UniRef90	UHGV-1364235_20	UniRef90_A0A1Y4R6K5	273.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1364235_20	908340.HMPREF9406_2570	299.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-1364235_20	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-1364235_20	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1364235_20	PF10145,PF05384,TIGR01760,TIGR02559,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_21	phrog_33	62.7	8.4e-18	distal tail protein Dit	tail
UniRef90	UHGV-1364235_21	UniRef90_A0A075KJA3	244.0	0	Putative tail component	N/A
eggNOG-mapper	UHGV-1364235_21	1399942.U3PIW9_9CAUD	246.0	0	Phage tail protein	N/A
NCBIFam	UHGV-1364235_21	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-1364235_21	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_22	phrog_1084	40.5	0.000000000014	N/A	unknown function
eggNOG-mapper	UHGV-1364235_22	1399942.U3PDS7_9CAUD	79.3	1.45e-17	N/A	N/A
structural_annotation	UHGV-1364235_22	PF08481,NF032891,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_24	phrog_24267	91.4	8.2e-27	N/A	unknown function
UniRef90	UHGV-1364235_24	UniRef90_C1MK33	77.8	0.0000000000000645	Predicted protein	N/A
eggNOG-mapper	UHGV-1364235_24	1123302.KB904167_gene530	105.0	7.12e-23	the current gene model (or a revised gene model) may contain a frame shift	N/A
COG	UHGV-1364235_24	COG4675	N/A	N/A	Phage tail collar domain	N/A
eggNOG-mapper	UHGV-1364235_25	1042156.CXIVA_01580	70.9	0.0000000000000389	N/A	N/A
PHROG	UHGV-1364235_26	phrog_1067	357.0	0	minor head protein	head and packaging
UniRef90	UHGV-1364235_26	UniRef90_A0A2P1CCB3	508.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1364235_26	1399942.U3PFX4_9CAUD	498.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1364235_26	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1364235_26	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1364235_26	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_27	phrog_372	278.7	0	tail protein	tail
UniRef90	UHGV-1364235_27	UniRef90_UPI00119D7B97	142.0	1.63e-32	N/A	N/A
eggNOG-mapper	UHGV-1364235_27	764299.STRIC_2437	142.0	4.59e-33	N/A	N/A
Pfam	UHGV-1364235_27	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1364235_27	PF05895,MF_04116,MF_00791,NF010681,COG3401	N/A	N/A	N/A	N/A
KOfam	UHGV-1364235_28	K06400	307.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1364235_28	phrog_95	313.3	0	integrase	integration and excision
UniRef90	UHGV-1364235_28	UniRef90_UPI000C07792A	322.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1364235_28	642492.Clole_2803	302.0	0	resolvase	N/A
Pfam	UHGV-1364235_28	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1364235_28	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1364235_28	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1364235_28	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1364235_28	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1364235_29	UniRef90_R6NGY9	73.6	0.00000000000000984	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1364235_29	1507.HMPREF0262_01302	58.5	0.00000000186	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1364235_29	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1364235_29	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1364235_30	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_32	phrog_155	151.6	2.8026e-45	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364235_32	UniRef90_A0Q0W3	189.0	0	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-1364235_32	386415.NT01CX_2192	189.0	0	ERF superfamily	N/A
Pfam	UHGV-1364235_32	PF04404	N/A	N/A	ERF superfamily	ERF
KOfam	UHGV-1364235_33	K03111	106.8	3e-31	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1364235_33	phrog_44	109.0	4.7e-32	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364235_33	UniRef90_A0A849CYJ0	136.0	9.41e-39	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1364235_33	1410626.JHXB01000004_gene180	133.0	1.48e-38	Single-strand binding protein family	N/A
Pfam	UHGV-1364235_33	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1364235_33	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1364235_33	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1364235_33	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1364235_33	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_35	phrog_1389	63.5	3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1364235_35	1280692.AUJL01000025_gene2094	69.7	0.0000000000000779	N/A	N/A
structural_annotation	UHGV-1364235_35	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_36	phrog_59	98.6	4.2e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364235_36	UniRef90_UPI000CF2F952	98.6	2.44e-23	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1364235_36	1462526.BN990_03869	75.9	0.00000000000000303	NUMOD4 motif	N/A
PADLOC	UHGV-1364235_36	HEase_00016	72.2	1.4e-20	homing endonuclease	RM
Pfam	UHGV-1364235_36	PF13392	N/A	N/A	HNH endonuclease	HNH_3
PHROG	UHGV-1364235_37	phrog_7566	90.7	8.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-1364235_37	411471.SUBVAR_05830	65.1	0.00000000000196	N/A	N/A
PHROG	UHGV-1364235_39	phrog_1682	46.9	0.00000000000034	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364235_39	UniRef90_A0A7H4KH39	54.3	0.00000172	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1364235_39	997350.HMPREF9129_1668	58.2	0.00000000764	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-1364235_39	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
PHROG	UHGV-1364235_40	phrog_10469	200.8	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364235_40	UniRef90_A0A371AZY0	300.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1364235_40	1291050.JAGE01000002_gene3381	216.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-1364235_40	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1364235_40	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-1364235_40	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_41	phrog_1257	61.4	1.6e-17	ribosome associated inhibitor A; zinc finger domain	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-1364235_41	40523.A8AT82_BPA51	48.5	0.00000231	N/A	N/A
PHROG	UHGV-1364235_42	phrog_9804	128.4	4.2e-38	N/A	unknown function
UniRef90	UHGV-1364235_42	UniRef90_A0A174S716	222.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1364235_42	585394.RHOM_14005	129.0	1.3e-35	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-1364235_42	cluster_137185	125.0	1.2e-38	NA	N/A
Pfam	UHGV-1364235_42	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1364235_42	PF11417	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1364235_43	TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1364235_44	K22409	109.9	2.3e-32	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1364235_44	phrog_3513	128.1	6.4e-38	endolysin	lysis
UniRef90	UHGV-1364235_44	UniRef90_A0A6B9SXM8	207.0	0	Peptidoglycan hydrolase	N/A
eggNOG-mapper	UHGV-1364235_44	483218.BACPEC_01324	184.0	0	amidase activity	N/A
Pfam	UHGV-1364235_44	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-1364235_44	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1364235_44	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1364235_44	PF01832,PF01476,MF_02014,NF038016,NF008399,COG1705,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_45	phrog_9233	81.8	6.1e-24	holin	lysis
UniRef90	UHGV-1364235_45	UniRef90_UPI00189D3A4F	99.8	9.16e-26	phage holin	N/A
eggNOG-mapper	UHGV-1364235_45	476272.RUMHYD_01966	105.0	1.44e-28	Putative phage holin Dp-1	N/A
Pfam	UHGV-1364235_45	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
KOfam	UHGV-1364235_46	K07451	40.4	0.000000000042	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1364235_46	phrog_144	58.1	1.6e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364235_46	UniRef90_I2E873	149.0	2.38221e-44	HNHc domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1364235_46	508419.F8J1A6_9CAUD	127.0	4.35e-36	HNH endonuclease	N/A
Pfam	UHGV-1364235_46	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-1364235_48	phrog_13845	139.6	5.79997e-42	N/A	unknown function
eggNOG-mapper	UHGV-1364235_48	1399942.U3PDR2_9CAUD	124.0	2.73e-35	N/A	N/A
structural_annotation	UHGV-1364235_48	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1364235_49	phrog_9	290.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1364235_49	UniRef90_A0A075KKZ0	863.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-1364235_49	508419.F8J159_9CAUD	869.0	0	Phage Terminase	N/A
Pfam	UHGV-1364235_49	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1364235_49	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1364235_49	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
KOfam	UHGV-1364235_51	K00390	42.1	0.0000000000098	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1364235_51	phrog_424	54.5	0.0000000000000016	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1364235_51	UniRef90_A0A2D6XFE4	144.0	2.42e-40	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1364235_51	742823.HMPREF9465_01257	142.0	3.1e-39	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1364235_51	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1364235_51	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1364235	Yes	32,239	36	100	1
UHGV-0209211	No	32,235	36	100	1
UHGV-1951842	No	32,235	36	100	1
UHGV-1436054	No	32,326	36	100	1