vOTU vOTU-002386

vOTU: vOTU-002386

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-002386
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00346 → vGENUS-00244 → vSUBGEN-28469 → vOTU-002386
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp004557855
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1366816
Biosample ID	SAMEA3664547
Genome length (bp)	39,051 bps
CheckV completeness	100.00% (Complete)
CDS count	52
CDS density	95.04%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp004557855	Total connections	33	Host agreement	75.76
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp900547385	Total connections	10	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1366816_1	phrog_14770	100.2	4.1e-30	N/A	unknown function
UniRef90	UHGV-1366816_1	UniRef90_A0A8D9UHE1	1947.0	0	PolyVal ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-1366816_1	445971.ANASTE_00728	283.0	0	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair	N/A
Pfam	UHGV-1366816_1	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-1366816_1	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-1366816_1	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-1366816_2	MF_01304	N/A	N/A	N/A	N/A
KOfam	UHGV-1366816_3	K01447	84.4	1.9e-24	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1366816_3	phrog_15001	201.2	0	endolysin	lysis
UniRef90	UHGV-1366816_3	UniRef90_A0A8D9UHF0	515.0	0	PGRP protein	N/A
eggNOG-mapper	UHGV-1366816_3	411483.FAEPRAA2165_03397	197.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1366816_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1366816_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1366816_3	PF01510,NF008758,COG5632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1366816_4	1347392.CCEZ01000043_gene405	55.1	0.0000000202	N/A	N/A
PHROG	UHGV-1366816_5	phrog_37604	62.5	7.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1366816_5	457412.RSAG_01109	62.4	0.000000000204	N/A	N/A
PHROG	UHGV-1366816_6	phrog_27545	124.0	9.4e-37	N/A	unknown function
UniRef90	UHGV-1366816_6	UniRef90_A0A2V2GQB6	283.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1366816_6	411471.SUBVAR_06976	136.0	3.67e-39	N/A	N/A
Pfam	UHGV-1366816_6	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
KOfam	UHGV-1366816_8	K20285	50.0	0.000000000000016	RABEPK; Rab9 effector protein with kelch motifs	N/A
Pfam	UHGV-1366816_8	PF07646	N/A	N/A	Kelch motif	Kelch_2
Pfam	UHGV-1366816_8	PF13964	N/A	N/A	Kelch motif	Kelch_6
Pfam	UHGV-1366816_8	PF13418	N/A	N/A	Galactose oxidase, central domain	Kelch_4
structural_annotation	UHGV-1366816_8	PF16472,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
KOfam	UHGV-1366816_9	K20285	70.1	2.7e-20	RABEPK; Rab9 effector protein with kelch motifs	N/A
Pfam	UHGV-1366816_9	PF01344	N/A	N/A	Kelch motif	Kelch_1
Pfam	UHGV-1366816_9	PF13964	N/A	N/A	Kelch motif	Kelch_6
structural_annotation	UHGV-1366816_9	PF16472,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
KOfam	UHGV-1366816_10	K19721	164.9	0	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-1366816_10	phrog_819	154.8	0	tail protein	tail
UniRef90	UHGV-1366816_10	UniRef90_A0A8D9PE13	749.0	0	Virion structural protein	N/A
Pfam	UHGV-1366816_10	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1366816_10	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1366816_11	phrog_3287	128.6	4e-38	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1366816_11	665956.HMPREF1032_03917	478.0	0	N/A	N/A
structural_annotation	UHGV-1366816_11	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-1366816_13	phrog_15239	41.8	0.000000000012	N/A	unknown function
PHROG	UHGV-1366816_14	phrog_1357	242.8	0	major head protein	head and packaging
UniRef90	UHGV-1366816_14	UniRef90_A0A8D9UHB3	601.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1366816_14	696281.Desru_1092	290.0	0	N/A	N/A
NCBIFam	UHGV-1366816_14	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1366816_14	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1366816_15	UniRef90_A0A8D9UHB9	412.0	0	Non-structural protein 5	N/A
UniRef90	UHGV-1366816_16	UniRef90_A0A8D9UHD6	128.0	5.95e-38	Ogr/Delta-like zinc finger	N/A
structural_annotation	UHGV-1366816_16	PF20020	N/A	N/A	N/A	N/A
PHROG	UHGV-1366816_17	phrog_156	170.7	0	portal protein	head and packaging
UniRef90	UHGV-1366816_17	UniRef90_A0A8D9UHD1	1120.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1366816_17	1121091.AUMP01000003_gene2583	367.0	0	N/A	N/A
Pfam	UHGV-1366816_17	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1366816_17	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1366816_19	K06909	140.5	1.49995e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1366816_19	phrog_979	166.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1366816_19	UniRef90_A0A8D9UH35	942.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-1366816_19	1232449.BAHV02000016_gene1824	478.0	0	N/A	N/A
Pfam	UHGV-1366816_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1366816_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1366816_19	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1366816_20	UniRef90_A0A8D9UHF6	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-1366816_20	272630.MexAM1_META1p3985	67.4	0.000000000000245	N/A	N/A
Pfam	UHGV-1366816_20	PF18932	N/A	N/A	N/A	DUF5681
PHROG	UHGV-1366816_21	phrog_7339	104.5	9.8e-31	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1366816_21	UniRef90_A0A2V2GLL9	533.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1366816_21	1150474.JQJI01000006_gene784	95.1	1.92e-20	metallophosphoesterase	N/A
Pfam	UHGV-1366816_21	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1366816_21	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-1366816_21	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
PHROG	UHGV-1366816_23	phrog_36	43.2	0.0000000000076	transcriptional regulator	transcription regulation
UniRef90	UHGV-1366816_23	UniRef90_UPI001D0837DD	114.0	1.01e-29	N/A	N/A
eggNOG-mapper	UHGV-1366816_23	428125.CLOLEP_01806	86.7	1.51e-19	N/A	N/A
structural_annotation	UHGV-1366816_23	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1366816_26	phrog_3377	182.3	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1366816_26	UniRef90_UPI000D8A0ABE	126.0	1.22e-33	sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1366816_26	1460635.JCM19038_3433	117.0	4.71e-30	N/A	N/A
PADLOC	UHGV-1366816_26	HEase_00016	44.3	0.0000000000012	homing endonuclease	RM
PHROG	UHGV-1366816_27	phrog_38832	40.6	0.000000000021	N/A	unknown function
structural_annotation	UHGV-1366816_31	TIGR04381	N/A	N/A	N/A	N/A
KOfam	UHGV-1366816_33	K01160	65.5	1.4e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1366816_33	phrog_34	69.7	5e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1366816_33	UniRef90_A0A498CNH4	142.0	6.38992e-42	RusA family crossover junction endodeoxyribonuclease	N/A
COG	UHGV-1366816_33	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1366816_33	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1366816_34	K00390	92.8	3.8e-27	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1366816_34	phrog_424	122.0	3.9e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1366816_34	UniRef90_UPI001D087498	374.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1366816_34	1408437.JNJN01000032_gene2312	341.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1366816_34	BrxP_00001	62.0	3.1e-18	BrxP	BREX
Pfam	UHGV-1366816_34	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1366816_34	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1366816_34	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1366816_35	phrog_9804	165.2	0	N/A	unknown function
UniRef90	UHGV-1366816_35	UniRef90_UPI001E312ACC	365.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-1366816_35	1121344.JHZO01000003_gene981	177.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1366816_35	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1366816_35	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1366816_36	phrog_16304	90.7	1.9e-26	N/A	unknown function
UniRef90	UHGV-1366816_36	UniRef90_UPI001E560709	425.0	0	N/A	N/A
eggNOG-mapper	UHGV-1366816_36	290402.Cbei_3733	61.6	0.0000000132	DnaD domain protein	N/A
Pfam	UHGV-1366816_36	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1366816_36	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1366816_36	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1366816_37	K03111	129.8	3.4e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1366816_37	phrog_44	131.9	4.8e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1366816_37	UniRef90_UPI001E2A5A6F	233.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1366816_37	445972.ANACOL_01827	125.0	4.34e-35	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1366816_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1366816_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1366816_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1366816_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1366816_37	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1366816_38	phrog_7566	51.8	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-1366816_38	693746.OBV_24070	69.7	0.0000000000000683	N/A	N/A
PHROG	UHGV-1366816_39	phrog_1389	67.3	2.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-1366816_39	883156.HMPREF9282_01223	68.9	0.000000000000144	N/A	N/A
structural_annotation	UHGV-1366816_39	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-1366816_40	phrog_659	196.3	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1366816_40	UniRef90_UPI001E5A6693	420.0	0	N/A	N/A
eggNOG-mapper	UHGV-1366816_40	1507.HMPREF0262_00431	236.0	0	N/A	N/A
Pfam	UHGV-1366816_40	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1366816_40	PF06378,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1366816_44	NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-1366816_46	UniRef90_UPI0018995761	79.0	4.56e-18	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-1366816_46	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1366816_48	UniRef90_UPI001E2EC555	211.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1366816_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1366816_48	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1366816_48	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1366816_52	K14059	203.2	0	int; integrase	N/A
PHROG	UHGV-1366816_52	phrog_1	180.5	0	integrase	integration and excision
UniRef90	UHGV-1366816_52	UniRef90_A0A8D9PE11	343.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1366816_52	693746.OBV_01970	153.0	2.19001e-40	Phage integrase family	N/A
Pfam	UHGV-1366816_52	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1366816_52	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1366816_52	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1366816	Yes	39,051	51	100	1
UHGV-0178356	No	38,818	51	100	1
UHGV-0200607	No	38,818	51	100	1