vOTU vOTU-002399

vOTU: vOTU-002399

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-002399
Number of genomes	89
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00987 → vGENUS-00899 → vSUBGEN-00578 → vOTU-002399
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-217 → CAG-217 sp000436335
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0246225
Biosample ID	SAMEA4702347
Genome length (bp)	39,437 bps
CheckV completeness	100.00% (Complete)
CDS count	51
CDS density	95.73%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-217 → CAG-217 sp000436335	Total connections	168	Host agreement	95.83
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-217 → CAG-217 sp000436335	Total connections	228	Host agreement	99.56

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0246225_1	phrog_511	64.7	8.6e-19	internal virion protein	head and packaging
PHROG	UHGV-0246225_2	phrog_12105	149.5	9.80909e-45	N/A	unknown function
eggNOG-mapper	UHGV-0246225_2	1519439.JPJG01000060_gene1891	57.8	0.00000000516	N/A	N/A
PHROG	UHGV-0246225_4	phrog_1357	253.3	0	major head protein	head and packaging
UniRef90	UHGV-0246225_4	UniRef90_A0A1I0BH03	316.0	0	Major capsid protein, N4-gp56 family	N/A
eggNOG-mapper	UHGV-0246225_4	748224.HMPREF9436_02545	269.0	0	N/A	N/A
Pfam	UHGV-0246225_4	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0246225_4	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0246225_4	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_5	phrog_13908	382.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0246225_5	1410650.JHWL01000003_gene2831	108.0	1.41e-24	N/A	N/A
KOfam	UHGV-0246225_6	K07584	44.5	0.000000000003	N/A	N/A
PHROG	UHGV-0246225_6	phrog_4478	50.0	0.000000000000041	peptidase	other
Pfam	UHGV-0246225_6	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0246225_6	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_7	phrog_156	292.5	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0246225_7	1410650.JHWL01000003_gene2833	500.0	0	N/A	N/A
structural_annotation	UHGV-0246225_7	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0246225_8	K06909	153.5	1.4013e-45	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0246225_8	phrog_979	163.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0246225_8	UniRef90_R6IPR7	985.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0246225_8	1410650.JHWL01000003_gene2834	532.0	0	N/A	N/A
Pfam	UHGV-0246225_8	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0246225_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0246225_8	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_9	phrog_1206	46.0	0.0000000000000064	terminase small subunit	head and packaging
KOfam	UHGV-0246225_11	K01520	143.5	1.60028e-42	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0246225_11	phrog_135	119.6	2.1e-35	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0246225_11	UniRef90_R6ILQ3	242.0	0	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-0246225_11	1282887.AUJG01000016_gene1113	144.0	1.84005e-41	N/A	N/A
Pfam	UHGV-0246225_11	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0246225_11	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0246225_11	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0246225_11	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-0246225_20	K01160	57.9	3.1e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0246225_20	phrog_140	129.5	1.9e-38	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0246225_20	UniRef90_A0A0L0WED4	129.0	1.12e-35	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0246225_20	1123263.AUKY01000072_gene2102	121.0	1.86e-33	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0246225_20	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0246225_20	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0246225_20	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_22	phrog_2514	103.2	2.5e-30	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0246225_22	1461580.CCAS010000067_gene4022	121.0	1.11e-30	DnaD domain protein	N/A
COG	UHGV-0246225_22	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0246225_22	PF12793,NF033788,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-0246225_23	K03111	144.6	1.00053e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0246225_23	phrog_44	145.3	3.40516e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0246225_23	UniRef90_R6JMM3	257.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0246225_23	718252.FP2_06770	159.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0246225_23	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0246225_23	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0246225_23	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0246225_23	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0246225_23	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_24	phrog_7566	116.6	8.7e-35	N/A	unknown function
UniRef90	UHGV-0246225_24	UniRef90_A0A8D9UHC0	70.5	0.0000000000000638	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0246225_24	1007096.BAGW01000031_gene114	85.9	1.61e-20	N/A	N/A
PHROG	UHGV-0246225_25	phrog_72	76.9	2.4e-22	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0246225_25	UniRef90_UPI001F3F3E5C	120.0	1.45e-31	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0246225_25	1399942.U3PCT8_9CAUD	98.2	2.17e-23	N/A	N/A
structural_annotation	UHGV-0246225_25	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_26	phrog_7838	222.3	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0246225_26	UniRef90_A0A8D9UGW3	198.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0246225_26	742767.HMPREF9456_02052	165.0	0	N/A	N/A
structural_annotation	UHGV-0246225_26	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_27	phrog_253	128.6	4.1e-38	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0246225_27	UniRef90_R6J0Q7	288.0	0	N/A	N/A
eggNOG-mapper	UHGV-0246225_27	1227360.C176_12583	88.6	4.27e-20	Siphovirus Gp157	N/A
Pfam	UHGV-0246225_27	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0246225_27	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_31	phrog_33952	195.8	0	N/A	unknown function
PHROG	UHGV-0246225_32	phrog_9562	67.9	1.6e-20	N/A	unknown function
UniRef90	UHGV-0246225_32	UniRef90_UPI001A9BFF4A	128.0	4.84e-34	pentapeptide repeat-containing protein	N/A
eggNOG-mapper	UHGV-0246225_32	1232443.BAIA02000078_gene49	119.0	1e-31	Pentapeptide repeat protein	N/A
Pfam	UHGV-0246225_32	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-0246225_32	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-0246225_32	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0246225_32	PF19062	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_33	phrog_26314	119.2	9.6e-36	N/A	unknown function
UniRef90	UHGV-0246225_35	UniRef90_R5L0Y8	71.2	0.00000000000000767	HTH cro/C1-type domain-containing protein	N/A
KOfam	UHGV-0246225_36	K22299	60.5	4.2e-17	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0246225_36	phrog_8	71.6	1.6e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0246225_36	UniRef90_R6ILS1	157.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0246225_36	1235790.C805_01005	95.5	4.9e-22	Helix-turn-helix domain protein	N/A
Pfam	UHGV-0246225_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0246225_36	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0246225_36	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_37	phrog_87	89.7	2.4e-26	metallo-protease	other
UniRef90	UHGV-0246225_37	UniRef90_A0A316RCR6	258.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0246225_37	1507.HMPREF0262_00423	115.0	2.77e-31	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0246225_37	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0246225_37	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0246225_37	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0246225_40	K06400	334.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0246225_40	phrog_95	334.4	0	integrase	integration and excision
UniRef90	UHGV-0246225_40	UniRef90_A0A1Q6LBY2	857.0	0	Recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0246225_40	537013.CLOSTMETH_01697	414.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0246225_40	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0246225_40	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0246225_40	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0246225_40	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0246225_40	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0246225_42	UniRef90_R6J3S0	572.0	0	Peptidase_C39_2 domain-containing protein	N/A
Pfam	UHGV-0246225_42	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
structural_annotation	UHGV-0246225_42	PF11814,NF033920,COG4990	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_43	phrog_263	93.5	1.1e-27	holin	lysis
UniRef90	UHGV-0246225_43	UniRef90_R6JQI4	159.0	0	Holin SPP1 family	N/A
eggNOG-mapper	UHGV-0246225_43	1121344.JHZO01000003_gene952	78.2	8.37e-18	SPP1 phage holin	N/A
Pfam	UHGV-0246225_43	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0246225_43	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0246225_43	PF04688	N/A	N/A	N/A	N/A
PHROG	UHGV-0246225_44	phrog_4105	79.7	2.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-0246225_44	397288.C806_00056	90.9	4.18e-22	N/A	N/A
UniRef90	UHGV-0246225_45	UniRef90_R6J123	119.0	4.48e-34	ATP synthase B chain	N/A
KOfam	UHGV-0246225_46	K24248	65.1	7e-19	EMID1; EMI domain-containing protein 1	N/A
PHROG	UHGV-0246225_46	phrog_5073	50.3	0.0000000000000051	tail fiber protein	tail
UniRef90	UHGV-0246225_46	UniRef90_R6ISY1	370.0	0	Extracellular nuclease	N/A
eggNOG-mapper	UHGV-0246225_46	2754.EH55_03895	61.6	0.000000391	alpha-ribazole phosphatase activity	N/A
Pfam	UHGV-0246225_46	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0246225_46	COG0406	N/A	N/A	Broad specificity phosphatase PhoE	N/A
PHROG	UHGV-0246225_47	phrog_22978	5045.7	0	N/A	unknown function
UniRef90	UHGV-0246225_47	UniRef90_R6ILN9	6167.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0246225_47	1410650.JHWL01000003_gene2814	113.0	1.3e-21	N/A	N/A
Pfam	UHGV-0246225_47	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-0246225_47	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
PHROG	UHGV-0246225_51	phrog_511	347.8	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0246225_51	1410650.JHWL01000003_gene2827	243.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0246225	Yes	39,437	50	100	1
UHGV-1367837	No	38,691	50	100	1
UHGV-1849754	No	37,355	51	100	1
UHGV-0377408	No	39,656	50	100	1
UHGV-2019769	No	40,330	50	100	1
UHGV-2173707	No	40,149	50	100	1
UHGV-2112196	No	39,785	50	100	1
UHGV-2137012	No	39,564	50	100	1
UHGV-2020303	No	39,499	50	100	1
UHGV-2175636	No	39,471	50	99	1
UHGV-2110881	No	39,329	51	99	1
UHGV-0164500	No	39,326	50	99	1
UHGV-2146348	No	37,977	50	96	1
UHGV-1442145	No	37,581	50	95	1
UHGV-1951844	No	37,574	50	95	1
UHGV-1450904	No	37,078	50	93	1
UHGV-1927707	No	36,433	50	92	1
UHGV-2145344	No	36,114	50	91	1
UHGV-1381654	No	36,079	50	91	1
UHGV-1377077	No	36,019	50	91	1
UHGV-0013965	No	35,509	51	90	1
UHGV-1974713	No	35,455	50	89	1
UHGV-0134974	No	35,435	50	89	1
UHGV-1541657	No	34,773	50	88	1
UHGV-1428710	No	34,332	50	86	1
UHGV-1545201	No	34,312	50	86	1
UHGV-1424035	No	34,085	50	86	1
UHGV-1535370	No	33,442	51	84	1
UHGV-1537033	No	33,234	50	84	1
UHGV-1503443	No	33,220	51	84	1
UHGV-1551046	No	32,935	50	83	1
UHGV-1427961	No	32,780	51	83	1
UHGV-1393985	No	32,757	50	82	1
UHGV-0061872	No	32,697	50	82	1
UHGV-1400987	No	32,468	51	82	1
UHGV-1435394	No	32,155	51	81	1
UHGV-1476467	No	31,941	51	80	1
UHGV-1475131	No	31,751	51	80	1
UHGV-1478886	No	31,670	51	80	1
UHGV-1429303	No	31,079	50	79	1
UHGV-1430545	No	30,956	51	78	1
UHGV-2239357	No	30,630	51	77	1
UHGV-1469692	No	30,530	51	77	1
UHGV-1391814	No	30,440	51	77	1
UHGV-1391400	No	30,383	51	76	1
UHGV-1542812	No	30,155	51	76	1
UHGV-1392287	No	30,085	51	76	1
UHGV-1387183	No	30,065	51	76	1
UHGV-1476594	No	29,912	51	75	1
UHGV-0130268	No	29,240	50	74	1
UHGV-1435231	No	28,878	50	73	1
UHGV-1449515	No	28,389	50	71	1
UHGV-1446809	No	28,048	50	71	1
UHGV-1490713	No	27,602	51	69	1
UHGV-1544510	No	26,915	50	68	1
UHGV-1491742	No	26,406	51	67	1
UHGV-1403093	No	26,203	51	66	1
UHGV-2110130	No	25,834	51	65	1
UHGV-1483376	No	25,408	51	64	1
UHGV-1409710	No	25,215	51	64	1
UHGV-1943344	No	25,160	50	63	1
UHGV-1404401	No	25,021	50	63	1
UHGV-1444754	No	24,861	51	63	1
UHGV-1444288	No	24,779	51	62	1
UHGV-0074780	No	23,643	51	60	1
UHGV-1377022	No	23,643	51	60	1
UHGV-1381874	No	23,456	50	59	1
UHGV-1383413	No	23,441	51	59	1
UHGV-1384628	No	22,159	51	56	1
UHGV-1438433	No	19,940	51	50	1
UHGV-1838783	No	19,748	49	50	1
UHGV-1651614	No	18,735	51	47	1
UHGV-0291436	No	18,709	51	47	1
UHGV-1599155	No	17,956	51	45	1
UHGV-1728969	No	17,663	51	44	1
UHGV-1655675	No	16,962	50	43	1
UHGV-1602083	No	16,678	51	42	1
UHGV-1833788	No	16,589	50	42	1
UHGV-1565879	No	16,227	51	41	1
UHGV-1768230	No	15,734	51	40	1
UHGV-0235084	No	15,447	50	39	1
UHGV-1654718	No	14,215	51	36	1
UHGV-0159272	No	13,963	52	35	1
UHGV-2201651	No	13,573	50	34	1
UHGV-1729802	No	13,354	51	34	1
UHGV-1616640	No	12,453	51	31	1
UHGV-1561085	No	11,946	50	30	1
UHGV-1584241	No	11,714	49	29	1
UHGV-1554555	No	10,199	51	26	1