vOTU vOTU-002650

vOTU: vOTU-002650

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-002650
Number of genomes	4
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-01451 → vSUBGEN-36115 → vOTU-002650
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1376078
Biosample ID	SAMEA3951623
Genome length (bp)	36,170 bps
CheckV completeness	100.00% (Complete)
CDS count	59
CDS density	95.52%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	200	Host agreement	91.5
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1376078_3	phrog_190	102.7	3.7e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1376078_3	UniRef90_A0A4D7AZG9	119.0	5.06e-32	N/A	N/A
eggNOG-mapper	UHGV-1376078_3	693746.OBV_25250	113.0	5.62e-30	N/A	N/A
Pfam	UHGV-1376078_3	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1376078_3	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_7	phrog_21498	298.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1376078_7	78346.BRUM_0376	261.0	0	DNA binding	N/A
COG	UHGV-1376078_7	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1376078_7	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_8	phrog_3584	115.2	5.5e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1376078_8	537013.CLOSTMETH_02141	73.2	0.000000000000478	N/A	N/A
structural_annotation	UHGV-1376078_8	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1376078_9	1297617.JPJD01000059_gene2640	84.3	5.1e-19	N/A	N/A
structural_annotation	UHGV-1376078_9	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_10	phrog_119	48.6	0.00000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1376078_10	UniRef90_A0A174XSZ8	125.0	1.51e-34	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1376078_10	1235793.C809_01915	121.0	2.21e-33	HNH endonuclease	N/A
Pfam	UHGV-1376078_10	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1376078_10	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1376078_11	phrog_1066	129.4	1.4e-38	N/A	unknown function
eggNOG-mapper	UHGV-1376078_11	1341151.ASZU01000004_gene265	122.0	3.78e-34	N/A	N/A
structural_annotation	UHGV-1376078_11	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_12	phrog_9	382.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1376078_12	UniRef90_UPI001D07C789	798.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1376078_12	1203606.HMPREF1526_00981	740.0	0	Terminase	N/A
Pfam	UHGV-1376078_12	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1376078_12	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1376078_12	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1376078_12	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_13	phrog_12	180.8	0	portal protein	head and packaging
UniRef90	UHGV-1376078_13	UniRef90_UPI001898FCCE	503.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1376078_13	626523.GCWU000342_01027	503.0	0	Portal protein	N/A
Pfam	UHGV-1376078_13	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1376078_13	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1376078_13	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1376078_14	K01358	132.6	4.8e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1376078_14	phrog_94	203.5	0	head maturation protease	head and packaging
UniRef90	UHGV-1376078_14	UniRef90_UPI0018979DC8	206.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1376078_14	1280689.AUJC01000011_gene1520	186.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1376078_14	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1376078_14	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1376078_14	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_15	phrog_10	179.3	0	major head protein	head and packaging
UniRef90	UHGV-1376078_15	UniRef90_UPI00189AE5FE	401.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1376078_15	1280689.AUJC01000011_gene1521	386.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1376078_15	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1376078_15	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1376078_15	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1376078_15	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_16	phrog_5223	42.4	0.0000000000094	neck protein	connector
UniRef90	UHGV-1376078_16	UniRef90_E6MGY0	54.3	0.000000177	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-1376078_16	887929.HMP0721_1264	54.3	0.0000000297	N/A	N/A
PHROG	UHGV-1376078_17	phrog_1951	75.6	4.7e-22	head-tail adaptor	connector
UniRef90	UHGV-1376078_17	UniRef90_UPI001B02B074	64.3	0.0000000000259	phage head closure protein	N/A
eggNOG-mapper	UHGV-1376078_17	1094508.Tsac_2422	54.7	0.0000000285	Phage head-tail joining protein	N/A
Pfam	UHGV-1376078_17	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1376078_17	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1376078_17	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1376078_17	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1376078_18	1487921.DP68_11350	63.2	0.0000000000176	N/A	N/A
structural_annotation	UHGV-1376078_18	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_19	phrog_5	42.4	0.000000000015	tail completion or Neck1 protein	connector
Pfam	UHGV-1376078_19	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1376078_19	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_20	phrog_88	86.3	3.8e-25	major tail protein	tail
UniRef90	UHGV-1376078_20	UniRef90_S0FUN2	115.0	3.35e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1376078_20	1195236.CTER_5106	115.0	5.62e-30	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1376078_20	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1376078_20	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1376078_20	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1376078_21	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_22	phrog_8462	146.9	2.10195e-43	tail length tape measure protein	tail
UniRef90	UHGV-1376078_22	UniRef90_UPI00098F054B	259.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1376078_22	509191.AEDB02000020_gene3249	242.0	0	tail tape measure protein, TP901	N/A
Pfam	UHGV-1376078_22	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-1376078_22	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1376078_22	TIGR01760,COG5280	N/A	N/A	N/A	N/A
UniRef90	UHGV-1376078_23	UniRef90_A0A3D0W045	226.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1376078_23	1195236.CTER_5103	126.0	1.15e-27	N/A	N/A
structural_annotation	UHGV-1376078_23	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_24	phrog_26795	129.3	2.7e-38	N/A	unknown function
eggNOG-mapper	UHGV-1376078_24	1195236.CTER_5102	157.0	4.91996e-42	N/A	N/A
structural_annotation	UHGV-1376078_24	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1376078_25	PF18614,MF_00085,NF003082,COG0361	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_26	phrog_5240	57.3	1.3e-16	tail fiber protein	tail
eggNOG-mapper	UHGV-1376078_26	357276.EL88_03475	60.8	0.00000232	Leucine-rich repeat (LRR) protein	N/A
Pfam	UHGV-1376078_26	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-1376078_26	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-1376078_26	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
KOfam	UHGV-1376078_27	K20846	64.5	1.1e-18	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-1376078_27	phrog_215	100.6	1.8e-29	structural protein with Ig domain	head and packaging
eggNOG-mapper	UHGV-1376078_27	203275.BFO_0574	80.9	0.000000000000624	Bacterial group 2 Ig-like protein	N/A
Pfam	UHGV-1376078_27	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-1376078_27	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1376078_27	PF02368,PF09423,MF_00575,NF003743,NF005261,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_28	phrog_937	49.0	0.00000000000011	hemolysin	other
eggNOG-mapper	UHGV-1376078_28	1519439.JPJG01000023_gene533	74.3	0.00000000000000135	N/A	N/A
PHROG	UHGV-1376078_30	phrog_6918	92.0	4.5e-27	holin	lysis
UniRef90	UHGV-1376078_30	UniRef90_A0A316QCY7	94.0	8.52e-23	Holin	N/A
eggNOG-mapper	UHGV-1376078_30	1297617.JPJD01000020_gene301	92.4	5.94e-23	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1376078_30	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1376078_30	PF09682,TIGR01673	N/A	N/A	N/A	N/A
KOfam	UHGV-1376078_31	K01447	108.9	6.9e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1376078_31	phrog_1794	111.3	1.2e-32	amidase	lysis
UniRef90	UHGV-1376078_31	UniRef90_A0A3D4VSU2	164.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1376078_31	397290.C810_00440	150.0	8.61e-40	Ami_2	N/A
Pfam	UHGV-1376078_31	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1376078_31	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1376078_31	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-1376078_32	UniRef90_A0A843IZ65	63.5	0.0000000000106	Sigma70_r4 domain-containing protein	N/A
Pfam	UHGV-1376078_32	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-1376078_32	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1376078_32	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1376078_34	PF18812,COG2929	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_35	phrog_36767	63.2	3.3e-18	N/A	unknown function
UniRef90	UHGV-1376078_35	UniRef90_UPI00067E7E25	79.3	1.16e-17	N/A	N/A
UniRef90	UHGV-1376078_38	UniRef90_A0A7M1RTM1	77.8	0.00000000000000801	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1376078_38	1378168.N510_03079	69.3	0.00000000000532	N/A	N/A
KOfam	UHGV-1376078_39	K06400	355.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1376078_39	phrog_95	349.1	0	integrase	integration and excision
UniRef90	UHGV-1376078_39	UniRef90_UPI0019572FB3	520.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1376078_39	1235835.C814_00825	412.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1376078_39	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1376078_39	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1376078_39	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1376078_39	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1376078_39	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
COG	UHGV-1376078_40	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1376078_40	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1376078_41	K19370	42.1	0.0000000000059	DNAJC22; DnaJ homolog subfamily C member 22	N/A
PHROG	UHGV-1376078_41	phrog_10292	80.4	2.3e-23	N/A	unknown function
UniRef90	UHGV-1376078_41	UniRef90_UPI0009EA0767	104.0	4.86e-26	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1376078_41	1198452.Jab_1c20720	95.1	3.42e-23	TM2 domain	N/A
Pfam	UHGV-1376078_41	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1376078_41	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1376078_41	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1376078_43	K18830	61.4	2.1e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1376078_43	phrog_8	50.3	0.000000000000015	transcriptional regulator	transcription regulation
UniRef90	UHGV-1376078_43	UniRef90_A0A2U1BEG8	128.0	8.67e-36	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1376078_43	445972.ANACOL_03315	120.0	1.83e-33	N/A	N/A
PADLOC	UHGV-1376078_43	retron_type_VI_hth_cluster2_1	40.4	0.000000000062	N/A	Retron
Pfam	UHGV-1376078_43	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1376078_43	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1376078_43	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1376078_49	UniRef90_A0A098GES5	102.0	2.31e-26	Putative phage associated protein	N/A
structural_annotation	UHGV-1376078_49	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
COG	UHGV-1376078_50	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-1376078_51	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-1376078_54	K00558	159.2	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1376078_54	phrog_363	244.7	0	DNA methyltransferase	other
UniRef90	UHGV-1376078_54	UniRef90_G4KRB8	350.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1376078_54	693746.OBV_01900	350.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1376078_54	MTase_II_00058	123.6	8.8e-37	Type II methyltransferase	RM
Pfam	UHGV-1376078_54	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1376078_54	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1376078_54	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1376078_54	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1376078_55	K19170	50.0	0.0000000000000023	dndC; DNA sulfur modification protein DndC	N/A
PHROG	UHGV-1376078_55	phrog_424	68.7	9.3e-20	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1376078_55	UniRef90_UPI001D087498	281.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1376078_55	1408437.JNJN01000032_gene2312	223.0	0	Phosphoadenosine phosphosulfate reductase	N/A
Pfam	UHGV-1376078_55	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1376078_55	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1376078_55	PF01507,MF_00064,TIGR02039,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_56	phrog_38832	55.5	8.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-1376078_56	1232443.BAIA02000078_gene48	63.2	0.0000000000153	N/A	N/A
structural_annotation	UHGV-1376078_56	PF18300,MF_01549,NF007981	N/A	N/A	N/A	N/A
PHROG	UHGV-1376078_57	phrog_31029	63.1	3.9e-18	N/A	unknown function
PHROG	UHGV-1376078_58	phrog_599	50.7	0.000000000000045	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1376078_58	UniRef90_A0A845MWR1	54.7	0.0000000189	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-1376078_58	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1376078_58	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-1376078_58	PF14354,NF007260	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1376078	Yes	36,170	56	100	1
UHGV-0181496	No	36,170	56	100	1
UHGV-1267412	No	36,170	56	100	1
UHGV-0112532	No	15,633	58	43	1