vOTU vOTU-002866

vOTU: vOTU-002866

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-002866
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-00131 → vSUBGEN-25267 → vOTU-002866
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0279070
Biosample ID	SAMN06165089
Genome length (bp)	41,481 bps
CheckV completeness	100.00% (Complete)
CDS count	63
CDS density	89.56%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	440	Host agreement	98.41
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0279070_1	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
PHROG	UHGV-0279070_4	phrog_1373	43.0	0.0000000000033	transcriptional regulator	transcription regulation
UniRef90	UHGV-0279070_4	UniRef90_A0A2A7B6N3	189.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0279070_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0279070_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0279070_4	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0279070_5	K14059	180.7	0	int; integrase	N/A
PHROG	UHGV-0279070_5	phrog_1	166.3	0	integrase	integration and excision
UniRef90	UHGV-0279070_5	UniRef90_A0A367GI93	223.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0279070_5	1507.HMPREF0262_00307	165.0	1.26117e-44	Phage integrase family	N/A
Pfam	UHGV-0279070_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0279070_5	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0279070_5	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0279070_6	1408437.JNJN01000043_gene801	94.4	3.43e-21	N/A	N/A
eggNOG-mapper	UHGV-0279070_7	658655.HMPREF0988_00916	120.0	3.02e-33	N/A	N/A
PHROG	UHGV-0279070_8	phrog_16490	103.3	1.7e-40	N/A	unknown function
eggNOG-mapper	UHGV-0279070_8	1408437.JNJN01000043_gene803	161.0	1.4013e-45	N/A	N/A
PHROG	UHGV-0279070_12	phrog_15303	75.1	8.3e-22	N/A	unknown function
PHROG	UHGV-0279070_13	phrog_1863	75.6	3.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0279070_13	718252.FP2_04900	141.0	7.14662e-43	N/A	N/A
KOfam	UHGV-0279070_14	K07273	157.5	0	acm; lysozyme	N/A
PHROG	UHGV-0279070_14	phrog_291	111.6	7.9e-33	endolysin	lysis
UniRef90	UHGV-0279070_14	UniRef90_A0A564U0D3	405.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0279070_14	718252.FP2_04890	239.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0279070_14	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0279070_14	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0279070_14	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-0279070_15	K10804	41.8	7.3e-24	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
Pfam	UHGV-0279070_15	PF00657	N/A	N/A	GDSL-like Lipase/Acylhydrolase	Lipase_GDSL
Pfam	UHGV-0279070_15	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-0279070_15	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-0279070_17	phrog_1067	173.1	0	minor head protein	head and packaging
UniRef90	UHGV-0279070_17	UniRef90_A0A2A7AM44	704.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0279070_17	1123263.AUKY01000068_gene489	189.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0279070_17	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0279070_17	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0279070_17	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0279070_17	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_18	phrog_33	69.5	8.2e-20	distal tail protein Dit	tail
UniRef90	UHGV-0279070_18	UniRef90_A0A173Z1X4	142.0	2.74e-38	Phage-related protein	N/A
eggNOG-mapper	UHGV-0279070_18	748727.CLJU_c03670	93.2	3.49e-20	tail component	N/A
NCBIFam	UHGV-0279070_18	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0279070_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0279070_18	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_19	phrog_9959	87.8	7e-26	tail length tape measure protein	tail
UniRef90	UHGV-0279070_19	UniRef90_A0A2A7ALS3	875.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0279070_19	596328.HMPREF0578_1241	163.0	3.13e-38	phage tail tape measure protein	N/A
Pfam	UHGV-0279070_19	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0279070_19	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0279070_19	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0279070_19	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_21	phrog_88	96.3	3.2e-28	major tail protein	tail
UniRef90	UHGV-0279070_21	UniRef90_G9YSC5	110.0	8.09e-27	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0279070_21	33035.JPJF01000039_gene278	70.9	0.00000000000203	N/A	N/A
NCBIFam	UHGV-0279070_21	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0279070_21	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_22	phrog_5	49.1	0.000000000000051	tail completion or Neck1 protein	connector
UniRef90	UHGV-0279070_22	UniRef90_A0A1C6FG30	116.0	4.85e-30	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0279070_22	908340.HMPREF9406_2573	109.0	3.52e-28	N/A	N/A
structural_annotation	UHGV-0279070_22	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0279070_23	999413.HMPREF1094_02005	65.5	0.00000000000227	N/A	N/A
structural_annotation	UHGV-0279070_23	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_24	phrog_19734	97.9	9.6e-29	N/A	unknown function
UniRef90	UHGV-0279070_24	UniRef90_A0A0D8I708	81.3	3.55e-17	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0279070_24	349161.Dred_2602	74.7	0.00000000000000207	N/A	N/A
structural_annotation	UHGV-0279070_24	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_25	phrog_749	63.1	4.1e-18	N/A	unknown function
UniRef90	UHGV-0279070_25	UniRef90_A0A371IJS1	50.8	0.00000442	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0279070_25	1211817.CCAT010000053_gene2133	64.7	0.00000000000395	N/A	N/A
PHROG	UHGV-0279070_26	phrog_10	130.7	8.8e-39	major head protein	head and packaging
UniRef90	UHGV-0279070_26	UniRef90_A0A2A7B712	724.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0279070_26	1235792.C808_00086	442.0	0	Phage capsid family	N/A
Pfam	UHGV-0279070_26	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0279070_26	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0279070_26	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0279070_26	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0279070_26	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0279070_27	K01358	77.0	3.3e-22	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0279070_27	phrog_94	126.9	2.3e-37	head maturation protease	head and packaging
UniRef90	UHGV-0279070_27	UniRef90_UPI001C0ECD60	134.0	7.85e-35	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0279070_27	1232452.BAIB02000007_gene1626	125.0	1.35e-32	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0279070_27	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0279070_27	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0279070_27	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_28	phrog_12	130.3	1.4e-38	portal protein	head and packaging
UniRef90	UHGV-0279070_28	UniRef90_A0A2A7B6S8	556.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0279070_28	349161.Dred_2606	259.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0279070_28	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0279070_28	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0279070_28	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0279070_28	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_29	phrog_9	241.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0279070_29	UniRef90_A0A2A7ALT4	1059.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0279070_29	1235792.C808_00083	632.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0279070_29	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0279070_29	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0279070_29	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_30	phrog_13845	57.9	1.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0279070_30	1399942.U3PDR2_9CAUD	67.8	0.000000000000569	N/A	N/A
structural_annotation	UHGV-0279070_30	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_31	phrog_119	56.4	4.5e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0279070_31	UniRef90_A0A2A7B6I3	231.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0279070_31	610130.Closa_0739	107.0	1.27e-28	HNH nucleases	N/A
Pfam	UHGV-0279070_31	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0279070_31	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0279070_32	K03427	145.2	5.29691e-43	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0279070_32	phrog_6380	347.6	0	DNA methyltransferase	other
UniRef90	UHGV-0279070_32	UniRef90_UPI0011DC86C4	567.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0279070_32	1444306.JFZC01000034_gene2643	350.0	0	type I restriction-modification system	N/A
PADLOC	UHGV-0279070_32	MTase_I_00005	87.6	1.5e-25	Type I methyltransferase	RM
Pfam	UHGV-0279070_32	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0279070_32	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0279070_32	PF02384,MF_01872,TIGR00497,COG0286	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0279070_36	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0279070_37	K03497	89.3	7.3e-26	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0279070_37	phrog_4715	120.1	1.7e-35	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0279070_37	UniRef90_A0A2A7AMC5	288.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0279070_37	411471.SUBVAR_05842	184.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0279070_37	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0279070_37	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0279070_37	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0279070_38	K03496	205.2	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0279070_38	phrog_164	153.2	1.4013e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0279070_38	UniRef90_A0A2A7B6H3	357.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0279070_38	411471.SUBVAR_05839	228.0	0	AAA domain	N/A
Pfam	UHGV-0279070_38	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0279070_38	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0279070_38	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_40	phrog_6969	58.0	1.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0279070_40	748224.HMPREF9436_00735	157.0	2.25609e-43	N/A	N/A
Pfam	UHGV-0279070_40	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-0279070_40	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-0279070_40	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0279070_40	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0279070_41	K03111	145.3	6.09565e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0279070_41	phrog_44	151.7	2.8026e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0279070_41	UniRef90_D4K451	211.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0279070_41	748224.HMPREF9436_00638	216.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0279070_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0279070_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0279070_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0279070_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0279070_41	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_42	phrog_7566	87.2	1.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-0279070_42	411471.SUBVAR_05830	105.0	2.62e-28	N/A	N/A
PHROG	UHGV-0279070_46	phrog_72	47.5	0.00000000000034	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0279070_46	411471.SUBVAR_05829	135.0	5.88e-38	N/A	N/A
structural_annotation	UHGV-0279070_46	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_47	phrog_14970	46.8	0.00000000000057	N/A	unknown function
COG	UHGV-0279070_47	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0279070_47	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0279070_51	PF10346,MF_00337,NF010671	N/A	N/A	N/A	N/A
Pfam	UHGV-0279070_55	PF12773	N/A	N/A	Double zinc ribbon	DZR
structural_annotation	UHGV-0279070_58	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0279070_59	phrog_8	46.0	0.0000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0279070_59	UniRef90_A0A2A7AM72	134.0	8.42e-39	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0279070_59	1378168.N510_01712	72.8	0.0000000000000539	N/A	N/A
Pfam	UHGV-0279070_59	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0279070_59	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0279070_60	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0279070	Yes	41,481	52	100	1
UHGV-0080262	No	41,118	52	100	1
UHGV-1367299	No	41,118	52	100	1
UHGV-2049287	No	41,126	52	100	1
UHGV-1393400	No	32,720	51	79	1
UHGV-1462782	No	22,484	51	55	1
UHGV-1692621	No	19,901	53	49	1
UHGV-2052193	No	18,724	51	46	1