vOTU vOTU-003024

vOTU: vOTU-003024

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-003024
Number of genomes	17
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp900547385
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00346 → vGENUS-00244 → vSUBGEN-36549 → vOTU-003024
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Host range breadth	Order
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1367119
Biosample ID	SAMEA3665115
Genome length (bp)	38,969 bps
CheckV completeness	100.00% (Complete)
CDS count	53
CDS density	95.30%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	53	Host agreement	86.79
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp900547385	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1367119_4	phrog_36	42.6	0.000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-1367119_4	UniRef90_UPI001D0837DD	114.0	1.01e-29	N/A	N/A
eggNOG-mapper	UHGV-1367119_4	428125.CLOLEP_01806	86.3	2.13e-19	N/A	N/A
structural_annotation	UHGV-1367119_4	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_6	phrog_7339	102.8	3e-30	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1367119_6	UniRef90_A0A2V2GLL9	533.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1367119_6	1150474.JQJI01000006_gene784	94.4	3.71e-20	metallophosphoesterase	N/A
Pfam	UHGV-1367119_6	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1367119_6	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-1367119_6	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
UniRef90	UHGV-1367119_7	UniRef90_A0A8D9UHF6	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-1367119_7	272630.MexAM1_META1p3985	56.6	0.00000000407	N/A	N/A
Pfam	UHGV-1367119_7	PF18932	N/A	N/A	N/A	DUF5681
KOfam	UHGV-1367119_8	K06909	140.8	1.10002e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1367119_8	phrog_979	164.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1367119_8	UniRef90_A0A8D9UH35	937.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-1367119_8	1232449.BAHV02000016_gene1824	480.0	0	N/A	N/A
Pfam	UHGV-1367119_8	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1367119_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1367119_8	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_10	phrog_156	171.0	0	portal protein	head and packaging
UniRef90	UHGV-1367119_10	UniRef90_A0A8D9UHD1	1120.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1367119_10	1121091.AUMP01000003_gene2583	368.0	0	N/A	N/A
Pfam	UHGV-1367119_10	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1367119_10	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
UniRef90	UHGV-1367119_11	UniRef90_A0A8D9UHD6	120.0	9.58e-35	Ogr/Delta-like zinc finger	N/A
structural_annotation	UHGV-1367119_11	PF20020	N/A	N/A	N/A	N/A
UniRef90	UHGV-1367119_12	UniRef90_A0A8D9UHB9	412.0	0	Non-structural protein 5	N/A
PHROG	UHGV-1367119_13	phrog_1357	242.8	0	major head protein	head and packaging
UniRef90	UHGV-1367119_13	UniRef90_A0A8D9UHB3	601.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1367119_13	696281.Desru_1092	290.0	0	N/A	N/A
NCBIFam	UHGV-1367119_13	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1367119_13	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_14	phrog_15239	41.8	0.000000000011	N/A	unknown function
PHROG	UHGV-1367119_16	phrog_3287	131.5	4.7e-39	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1367119_16	665956.HMPREF1032_03917	484.0	0	N/A	N/A
structural_annotation	UHGV-1367119_16	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
KOfam	UHGV-1367119_17	K19721	163.5	0	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-1367119_17	phrog_819	145.9	0	tail protein	tail
UniRef90	UHGV-1367119_17	UniRef90_A0A8D9PE13	763.0	0	Virion structural protein	N/A
Pfam	UHGV-1367119_17	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1367119_17	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1367119_18	PF07250,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_19	phrog_37900	251.0	0	N/A	unknown function
UniRef90	UHGV-1367119_19	UniRef90_A0A2V2GLK0	404.0	0	N/A	N/A
eggNOG-mapper	UHGV-1367119_19	552398.HMPREF0866_03098	197.0	0	N/A	N/A
Pfam	UHGV-1367119_19	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1367119_19	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1367119_19	PF19789,PF03785	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_20	phrog_29409	147.1	4.76441e-44	N/A	unknown function
UniRef90	UHGV-1367119_20	UniRef90_A0A2V2GQ35	272.0	0	Isoaspartyl peptidase	N/A
PHROG	UHGV-1367119_23	phrog_27545	114.8	5.9e-34	N/A	unknown function
UniRef90	UHGV-1367119_23	UniRef90_A0A2V2GQB6	295.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1367119_23	411471.SUBVAR_06976	134.0	1.48e-38	N/A	N/A
Pfam	UHGV-1367119_23	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-1367119_24	phrog_37604	62.8	4.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1367119_24	457412.RSAG_01109	62.0	0.000000000286	N/A	N/A
eggNOG-mapper	UHGV-1367119_25	1347392.CCEZ01000043_gene405	54.3	0.0000000415	N/A	N/A
KOfam	UHGV-1367119_26	K01448	59.0	6.6e-17	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1367119_26	phrog_435	74.0	2.6e-21	endolysin	lysis
UniRef90	UHGV-1367119_26	UniRef90_A0A2V2GRI9	474.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1367119_26	994573.T472_0210960	92.4	4.91e-20	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-1367119_26	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1367119_26	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1367119_26	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1367119_27	MF_01304	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_28	phrog_14770	100.0	4.7e-30	N/A	unknown function
UniRef90	UHGV-1367119_28	UniRef90_A0A8D9UHE1	2080.0	0	PolyVal ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-1367119_28	445971.ANASTE_00728	283.0	0	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair	N/A
Pfam	UHGV-1367119_28	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-1367119_28	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-1367119_28	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-1367119_28	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
KOfam	UHGV-1367119_29	K14059	202.9	0	int; integrase	N/A
PHROG	UHGV-1367119_29	phrog_1	180.0	0	integrase	integration and excision
UniRef90	UHGV-1367119_29	UniRef90_A0A8D9PE11	343.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1367119_29	693746.OBV_01970	155.0	3.31996e-41	Phage integrase family	N/A
Pfam	UHGV-1367119_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1367119_29	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1367119_29	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1367119_33	UniRef90_UPI001E2EC555	213.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1367119_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1367119_33	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_34	phrog_8	46.6	0.00000000000079	transcriptional regulator	transcription regulation
UniRef90	UHGV-1367119_34	UniRef90_A0A417HNT1	99.4	1.79e-24	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1367119_34	1378168.N510_01712	74.3	0.0000000000000132	N/A	N/A
Pfam	UHGV-1367119_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1367119_34	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1367119_35	UniRef90_UPI001956DCC9	90.1	1.72e-22	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-1367119_35	PF10078,NF040507,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1367119_37	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_40	phrog_14970	192.9	0	N/A	unknown function
UniRef90	UHGV-1367119_40	UniRef90_UPI00123F00F5	174.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1367119_40	428127.EUBDOL_01248	157.0	1.4013e-45	double-strand break repair protein	N/A
Pfam	UHGV-1367119_40	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1367119_40	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1367119_40	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_41	phrog_72	54.3	0.0000000000000016	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1367119_41	UniRef90_A0A8D9PDS2	163.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1367119_41	445972.ANACOL_01825	142.0	8.14995e-41	N/A	N/A
structural_annotation	UHGV-1367119_41	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_42	phrog_7566	52.0	0.00000000000001	N/A	unknown function
eggNOG-mapper	UHGV-1367119_42	693746.OBV_24070	70.1	0.0000000000000483	N/A	N/A
KOfam	UHGV-1367119_43	K03111	128.6	7.7e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1367119_43	phrog_44	132.1	4e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1367119_43	UniRef90_UPI001E2A5A6F	231.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1367119_43	1235835.C814_01372	130.0	5.13e-37	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1367119_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1367119_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1367119_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1367119_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1367119_43	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_44	phrog_16304	87.7	1.4e-25	N/A	unknown function
UniRef90	UHGV-1367119_44	UniRef90_UPI001E560709	415.0	0	N/A	N/A
eggNOG-mapper	UHGV-1367119_44	290402.Cbei_3733	61.6	0.0000000128	DnaD domain protein	N/A
Pfam	UHGV-1367119_44	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1367119_44	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1367119_44	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1367119_45	phrog_9804	165.3	0	N/A	unknown function
UniRef90	UHGV-1367119_45	UniRef90_UPI001E312ACC	365.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-1367119_45	1121344.JHZO01000003_gene981	179.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1367119_45	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1367119_45	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1367119_46	K00558	153.6	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1367119_46	phrog_116	202.0	0	DNA methyltransferase	other
UniRef90	UHGV-1367119_46	UniRef90_A0A1C5KYC3	420.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1367119_46	718252.FP2_16350	410.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1367119_46	oMTase_00004	223.1	0	orphan methyltransferase	RM
Pfam	UHGV-1367119_46	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1367119_46	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1367119_46	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-1367119_47	K01160	68.6	1.6e-19	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1367119_47	phrog_34	71.2	1.5e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1367119_47	UniRef90_A0A498CNH4	142.0	1.76003e-41	RusA family crossover junction endodeoxyribonuclease	N/A
COG	UHGV-1367119_47	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1367119_47	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1367119_49	TIGR04381	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1367119	Yes	38,969	52	100	1
UHGV-0308443	No	38,691	52	100	1
UHGV-1365973	No	38,050	53	100	1
UHGV-1522285	No	38,794	52	100	1
UHGV-1518658	No	40,385	52	100	1
UHGV-0064662	No	40,007	52	100	1
UHGV-1435353	No	38,427	53	99	1
UHGV-1535905	No	38,430	52	99	1
UHGV-0044267	No	38,284	53	99	1
UHGV-1507252	No	38,116	52	98	1
UHGV-0088411	No	35,084	52	90	1
UHGV-1545068	No	25,165	53	65	1
UHGV-1728133	No	13,246	54	34	1
UHGV-1717131	No	13,010	51	33	1
UHGV-1551508	No	11,354	54	32	1
UHGV-1569866	No	12,072	52	31	1
UHGV-1593291	No	11,533	51	30	1