vOTU vOTU-003203

vOTU: vOTU-003203

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-003203
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-01074 → vGENUS-01200 → vSUBGEN-22856 → vOTU-003203
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → Phil1 → Phil1 sp001940855
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0304545
Biosample ID	SAMN13509810
Genome length (bp)	41,206 bps
CheckV completeness	100.00% (Complete)
CDS count	68
CDS density	93.02%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → Phil1 → Phil1 sp001940855	Total connections	1032	Host agreement	97.09
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → Phil1 → Phil1 sp001940855	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0304545_1	PF03947,NF003076	N/A	N/A	N/A	N/A
PADLOC	UHGV-0304545_3	cluster3	113.3	4.2e-33	Csf1_0_IV	CRISPR-CAS
structural_annotation	UHGV-0304545_3	TIGR03114	N/A	N/A	N/A	N/A
PADLOC	UHGV-0304545_4	icity0121	117.9	1.4e-34	Putative small subunit of type IV - was DinG	CRISPR-CAS
PHROG	UHGV-0304545_5	phrog_22746	242.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0304545_5	107636.JQNK01000009_gene1999	127.0	2.36e-31	crispr-associated protein	N/A
PADLOC	UHGV-0304545_5	cluster1	171.4	0	Csf2_0_IV	CRISPR-CAS
COG	UHGV-0304545_5	COG1857	N/A	N/A	CRISPR-Cas system type I effector complex subunit Cas7, RAMP superfamily	N/A
PHROG	UHGV-0304545_6	phrog_34599	236.3	0	N/A	unknown function
UniRef90	UHGV-0304545_6	UniRef90_A0A7W0HHE7	153.0	1.52041e-42	CRISPR type IV-associated protein Csf3	N/A
eggNOG-mapper	UHGV-0304545_6	1268303.RHODMAR_4878	68.2	0.0000000000624	N/A	N/A
PADLOC	UHGV-0304545_6	cluster2	141.2	1.29998e-41	Csf3_0_IV	CRISPR-CAS
structural_annotation	UHGV-0304545_6	PF09704,TIGR03116,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-0304545_7	K00390	52.2	0.0000000000000049	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0304545_7	phrog_2302	114.0	2.2e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0304545_7	UniRef90_A0A6S6XHM1	303.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0304545_7	1268303.RHODMAR_4883	55.8	0.00000267	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0304545_7	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0304545_7	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0304545_7	PF01507,MF_00064,NF006327,COG3969	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_8	phrog_36	43.8	0.0000000000044	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0304545_8	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_9	phrog_5057	87.3	1.1e-25	N/A	unknown function
PHROG	UHGV-0304545_10	phrog_940	308.7	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0304545_10	UniRef90_A0A843HIS8	372.0	0	N/A	N/A
eggNOG-mapper	UHGV-0304545_10	1232449.BAHV02000018_gene1534	311.0	0	N/A	N/A
PADLOC	UHGV-0304545_10	MTase_II_00015	61.8	1.4e-17	Type II methyltransferase	RM
Pfam	UHGV-0304545_10	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0304545_10	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0304545_10	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0304545_10	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_11	phrog_309	133.0	1e-39	terminase small subunit	head and packaging
UniRef90	UHGV-0304545_11	UniRef90_A0A6B1UEY7	146.0	3.36312e-43	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0304545_11	1536772.R70723_06635	123.0	2.18e-34	transposase activity	N/A
Pfam	UHGV-0304545_11	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-0304545_11	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0304545_11	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0304545_12	K06909	98.0	9.6e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0304545_12	phrog_2	69.8	5.9e-20	terminase large subunit	head and packaging
UniRef90	UHGV-0304545_12	UniRef90_UPI001412C9CB	525.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0304545_12	1292035.H476_1019	391.0	0	Phage terminase large subunit	N/A
COG	UHGV-0304545_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0304545_12	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_13	phrog_533	374.8	0	portal protein	head and packaging
UniRef90	UHGV-0304545_13	UniRef90_UPI000412491D	535.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0304545_13	1120998.AUFC01000030_gene2232	533.0	0	N/A	N/A
Pfam	UHGV-0304545_13	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0304545_13	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_14	phrog_581	335.1	0	minor head protein	head and packaging
UniRef90	UHGV-0304545_14	UniRef90_A0A417EY47	367.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0304545_14	645991.Sgly_0338	354.0	0	N/A	N/A
Pfam	UHGV-0304545_14	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0304545_14	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0304545_14	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_15	phrog_2303	54.4	0.0000000000000022	head scaffolding protein	head and packaging
UniRef90	UHGV-0304545_15	UniRef90_A0A1V6AXQ8	54.7	0.0000064	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0304545_15	1007103.AFHW01000034_gene2056	56.2	0.000000377	N/A	N/A
Pfam	UHGV-0304545_15	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0304545_16	phrog_10	159.1	0	major head protein	head and packaging
UniRef90	UHGV-0304545_16	UniRef90_UPI00040DB95C	493.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0304545_16	1120998.AUFC01000030_gene2236	493.0	0	Phage capsid family	N/A
Pfam	UHGV-0304545_16	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0304545_16	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0304545_16	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0304545_16	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_17	phrog_541	52.5	0.0000000000000083	head-tail adaptor	connector
PHROG	UHGV-0304545_18	phrog_3366	70.9	1.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-0304545_18	411470.RUMGNA_02221	57.8	0.00000000328	N/A	N/A
Pfam	UHGV-0304545_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0304545_18	PF20536,TIGR01563,COG1853	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_19	phrog_556	87.8	9.4e-26	minor head protein	head and packaging
UniRef90	UHGV-0304545_19	UniRef90_UPI001958E7C1	154.0	2.8026e-45	minor capsid protein	N/A
eggNOG-mapper	UHGV-0304545_19	665956.HMPREF1032_03062	144.0	3.53968e-42	Minor capsid protein	N/A
Pfam	UHGV-0304545_19	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0304545_19	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_20	phrog_3266	77.1	1.8e-22	tail completion	connector
eggNOG-mapper	UHGV-0304545_20	1280692.AUJL01000004_gene841	68.6	0.00000000000111	N/A	N/A
structural_annotation	UHGV-0304545_20	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_21	phrog_3099	67.1	3.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0304545_21	1160721.RBI_II00532	80.1	1.57e-16	N/A	N/A
structural_annotation	UHGV-0304545_21	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
COG	UHGV-0304545_22	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
PHROG	UHGV-0304545_23	phrog_11299	84.8	1.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0304545_23	1298920.KI911353_gene2067	57.8	0.0000000163	N/A	N/A
structural_annotation	UHGV-0304545_23	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_24	phrog_706	118.7	4.9e-35	N/A	unknown function
UniRef90	UHGV-0304545_24	UniRef90_UPI00156F9D1C	160.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0304545_24	476272.RUMHYD_01784	162.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0304545_24	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0304545_24	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_25	phrog_1535	135.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0304545_25	1235797.C816_04182	165.0	1.44e-39	SLT domain	N/A
COG	UHGV-0304545_25	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_26	phrog_1194	67.3	2.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0304545_26	742733.HMPREF9469_01808	114.0	4.93e-31	N/A	N/A
Pfam	UHGV-0304545_26	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0304545_26	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_27	phrog_18190	150.2	0	N/A	unknown function
UniRef90	UHGV-0304545_27	UniRef90_UPI00143A35E2	221.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0304545_27	1449050.JNLE01000003_gene3879	186.0	0	N/A	N/A
Pfam	UHGV-0304545_27	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0304545_29	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0304545_30	411471.SUBVAR_06929	301.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0304545_30	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0304545_32	PF21722	N/A	N/A	N/A	N/A
KOfam	UHGV-0304545_35	K19303	69.6	4.9e-20	mepH; murein DD-endopeptidase [EC:3.4.-.-]	N/A
PHROG	UHGV-0304545_35	phrog_1493	67.1	2.8e-19	endolysin	lysis
UniRef90	UHGV-0304545_35	UniRef90_A0A316RRK6	469.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0304545_35	1304880.JAGB01000001_gene527	82.8	0.000000000000045	Peptidoglycan binding domain	N/A
Pfam	UHGV-0304545_35	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0304545_35	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0304545_35	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0304545_35	PF00877,PF00112,PF01471,NF033742,COG0791,COG4870	N/A	N/A	N/A	N/A
UniRef90	UHGV-0304545_36	UniRef90_UPI001E4D989F	52.4	0.00000137	CTP synthase	N/A
eggNOG-mapper	UHGV-0304545_36	552396.HMPREF0863_01650	53.9	0.0000000506	N/A	N/A
eggNOG-mapper	UHGV-0304545_37	394503.Ccel_1297	57.8	0.00000000107	N/A	N/A
Pfam	UHGV-0304545_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0304545_41	PF21291,TIGR02607,COG3093	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_42	phrog_16123	79.6	4.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-0304545_42	1064535.MELS_1123	99.4	1e-24	N/A	N/A
PHROG	UHGV-0304545_43	phrog_21718	46.5	0.00000000000031	N/A	unknown function
eggNOG-mapper	UHGV-0304545_43	476272.RUMHYD_01768	53.9	0.000000428	N/A	N/A
PHROG	UHGV-0304545_44	phrog_16490	52.8	0.0000000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0304545_45	1408437.JNJN01000043_gene802	146.0	9.80909e-44	N/A	N/A
KOfam	UHGV-0304545_47	K14059	125.9	5.4e-37	int; integrase	N/A
PHROG	UHGV-0304545_47	phrog_1	133.6	1.9e-39	integrase	integration and excision
UniRef90	UHGV-0304545_47	UniRef90_UPI0005D1DBC9	299.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0304545_47	1514668.JOOA01000001_gene242	299.0	0	Phage integrase family	N/A
Pfam	UHGV-0304545_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0304545_47	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0304545_47	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0304545_48	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0304545_48	PF13560,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0304545_49	K22300	65.6	1.1e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0304545_49	phrog_8	78.4	1.3e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0304545_49	UniRef90_A0A2R3MWK3	89.0	7.28e-21	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0304545_49	1121335.Clst_0369	84.0	1.34e-19	helix-turn-helix	N/A
Pfam	UHGV-0304545_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0304545_49	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
Pfam	UHGV-0304545_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0304545_57	phrog_253	97.5	1.5e-28	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0304545_57	UniRef90_A0A1C5N4H2	127.0	2.43e-34	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-0304545_57	748224.HMPREF9436_03356	98.2	7.89e-24	Siphovirus Gp157	N/A
Pfam	UHGV-0304545_57	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0304545_57	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_58	phrog_27776	87.0	2.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-0304545_58	1382356.JQMP01000004_gene51	121.0	3.69e-32	N/A	N/A
PHROG	UHGV-0304545_59	phrog_72	59.1	7.8e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0304545_59	UniRef90_A0A8D9PDS2	120.0	1.82e-31	NinB protein	N/A
eggNOG-mapper	UHGV-0304545_59	1399942.U3PCT8_9CAUD	126.0	1.78e-34	N/A	N/A
structural_annotation	UHGV-0304545_59	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_60	phrog_7566	96.2	2e-28	N/A	unknown function
UniRef90	UHGV-0304545_60	UniRef90_UPI001C1E3E38	70.9	0.0000000000000576	phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0304545_60	693746.OBV_24070	75.9	1.62e-16	N/A	N/A
KOfam	UHGV-0304545_61	K03111	139.2	4.60004e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0304545_61	phrog_44	137.0	1.10001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0304545_61	UniRef90_A0A2V2FMD6	148.0	1.20512e-43	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0304545_61	1123511.KB905849_gene3281	122.0	6.06e-34	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0304545_61	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0304545_61	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0304545_61	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0304545_61	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0304545_61	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_62	phrog_2149	71.5	6.3e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0304545_62	UniRef90_UPI00164BB1D1	127.0	3.46e-32	transcriptional regulator	N/A
eggNOG-mapper	UHGV-0304545_62	203119.Cthe_2466	109.0	4.06e-25	N/A	N/A
structural_annotation	UHGV-0304545_62	PF01475,TIGR01610,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-0304545_64	phrog_824	144.2	3.89561e-43	N/A	unknown function
UniRef90	UHGV-0304545_64	UniRef90_A0A6N8GXS9	149.0	8.68805e-44	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0304545_64	397288.C806_00096	121.0	1.18e-33	VRR_NUC	N/A
Pfam	UHGV-0304545_64	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-0304545_67	phrog_924	47.0	0.000000000000075	N/A	unknown function
UniRef90	UHGV-0304545_67	UniRef90_U2SKB7	137.0	1.77e-39	N/A	N/A
Pfam	UHGV-0304545_67	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0304545_67	NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-0304545_68	UniRef90_A0A3D4T790	62.8	0.000000000036	YopX domain-containing protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0304545	Yes	41,206	52	100	1
UHGV-0189881	No	41,206	52	100	1
UHGV-1327749	No	41,206	52	100	1
UHGV-1367952	No	41,206	52	100	1
UHGV-0123325	No	27,098	52	66	1
UHGV-1425507	No	20,840	51	51	1
UHGV-1562282	No	19,208	52	47	1
UHGV-2228726	No	11,744	51	29	1