vOTU vOTU-003562

vOTU: vOTU-003562

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-003562
Number of genomes	15
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp001916715
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00474 → vGENUS-00565 → vSUBGEN-47008 → vOTU-003562
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1351538
Biosample ID	SAMEA3664596
Genome length (bp)	42,422 bps
CheckV completeness	100.00% (Complete)
CDS count	60
CDS density	93.56%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02	Total connections	67	Host agreement	85.07
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp001916715	Total connections	21	Host agreement	95.24

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1351538_1	phrog_21357	56.6	2.7e-16	endolysin	lysis
UniRef90	UHGV-1351538_1	UniRef90_UPI001BB47323	99.4	9.63e-22	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1351538_1	1007096.BAGW01000022_gene2648	81.3	0.00000000000000111	CHAP domain	N/A
Pfam	UHGV-1351538_1	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1351538_1	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1351538_1	TIGR02594,COG3738	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_2	phrog_1863	61.1	1.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1351538_2	748224.HMPREF9436_01412	89.4	1.45e-22	N/A	N/A
PHROG	UHGV-1351538_3	phrog_10091	108.2	5.3e-32	holin	lysis
UniRef90	UHGV-1351538_3	UniRef90_D7GNX3	131.0	3.96e-38	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1351538_3	445975.COLSTE_02144	114.0	3.2e-32	Bacteriophage holin	N/A
Pfam	UHGV-1351538_3	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1351538_3	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1351538_3	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1351538_3	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1351538_4	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_5	phrog_3754	99.9	2.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-1351538_5	476272.RUMHYD_01764	146.0	7.42688e-44	N/A	N/A
PHROG	UHGV-1351538_6	phrog_21718	93.0	3e-27	N/A	unknown function
eggNOG-mapper	UHGV-1351538_6	397290.C810_05210	94.4	1.09e-22	N/A	N/A
PHROG	UHGV-1351538_7	phrog_22984	76.8	2.2e-22	N/A	unknown function
PHROG	UHGV-1351538_8	phrog_16490	151.4	7.00649e-45	N/A	unknown function
eggNOG-mapper	UHGV-1351538_8	1408437.JNJN01000043_gene803	144.0	8.78999e-40	N/A	N/A
PHROG	UHGV-1351538_10	phrog_20016	190.4	0	N/A	unknown function
UniRef90	UHGV-1351538_10	UniRef90_A0A285PT46	201.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1351538_10	1226322.HMPREF1545_00077	166.0	0	N/A	N/A
structural_annotation	UHGV-1351538_10	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1351538_11	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-1351538_12	K14059	153.4	2.8026e-45	int; integrase	N/A
PHROG	UHGV-1351538_12	phrog_1	153.5	1.4013e-45	integrase	integration and excision
UniRef90	UHGV-1351538_12	UniRef90_R6I1Y0	336.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1351538_12	1384066.JAGT01000001_gene153	113.0	5.03e-26	Phage integrase family	N/A
Pfam	UHGV-1351538_12	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1351538_12	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1351538_12	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1351538_13	UniRef90_A0A8D9UHA6	73.9	0.000000000000562	Helix-turn-helix XRE-family like protein	N/A
COG	UHGV-1351538_13	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1351538_13	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1351538_15	UniRef90_A0A2L0I162	76.6	0.00000000000616	J domain-containing protein	N/A
eggNOG-mapper	UHGV-1351538_15	1331660.L313_0183	72.8	0.0000000000327	DnaJ-class molecular chaperone with C-terminal Zn finger domain	N/A
COG	UHGV-1351538_15	COG0484	N/A	N/A	DnaJ-class molecular chaperone with C-terminal Zn finger domain	N/A
UniRef90	UHGV-1351538_16	UniRef90_A0A8D9PDV2	55.8	0.0000000137	DNA methyl phosphotriester repair domain protein	N/A
eggNOG-mapper	UHGV-1351538_16	1392493.JIAB01000001_gene1404	62.4	0.00000000011	repeat protein	N/A
COG	UHGV-1351538_16	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
UniRef90	UHGV-1351538_18	UniRef90_A0A1Y4RX82	52.8	0.0000065	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1351538_18	1304866.K413DRAFT_0834	54.3	0.00000015	PFAM helix-turn-helix domain protein	N/A
COG	UHGV-1351538_18	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
KOfam	UHGV-1351538_19	K22300	50.1	0.000000000000055	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1351538_19	phrog_8	41.9	0.000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-1351538_19	UniRef90_A0A810PZI0	71.2	0.00000000000000434	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1351538_19	693746.OBV_25500	63.9	0.000000000000601	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1351538_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1351538_19	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1351538_19	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1351538_20	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_21	phrog_253	100.4	1.8e-29	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1351538_21	UniRef90_A0A1C5N4H2	97.1	1.55e-22	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-1351538_21	1410670.JHXF01000015_gene2268	86.7	2.37e-19	Siphovirus Gp157	N/A
Pfam	UHGV-1351538_21	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1351538_21	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_22	phrog_155	77.2	2.5e-22	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1351538_22	UniRef90_UPI0018AC33A4	184.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1351538_22	1497679.EP56_08440	74.3	0.000000000000229	ERF superfamily	N/A
Pfam	UHGV-1351538_22	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1351538_22	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_23	phrog_72	46.8	0.00000000000022	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1351538_23	UniRef90_A0A2Z4Q9W9	105.0	9.35e-26	NinB	N/A
eggNOG-mapper	UHGV-1351538_23	445972.ANACOL_01825	79.3	3.03e-16	N/A	N/A
structural_annotation	UHGV-1351538_23	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_24	phrog_7566	91.2	6.9e-27	N/A	unknown function
eggNOG-mapper	UHGV-1351538_24	508419.F8J187_9CAUD	103.0	1.32e-27	N/A	N/A
KOfam	UHGV-1351538_25	K03111	119.5	4.4e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1351538_25	phrog_44	125.2	4.9e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1351538_25	UniRef90_R6IDK3	153.0	2.8026e-45	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1351538_25	1007096.BAGW01000023_gene151	134.0	8.73e-39	Single-strand binding protein family	N/A
Pfam	UHGV-1351538_25	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1351538_25	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1351538_25	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1351538_25	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1351538_25	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_26	phrog_16304	65.9	6.6e-19	N/A	unknown function
UniRef90	UHGV-1351538_26	UniRef90_A0A316T7M6	103.0	8.57e-24	N/A	N/A
eggNOG-mapper	UHGV-1351538_26	1345695.CLSA_c35700	57.4	0.00000096	DnaD domain protein	N/A
Pfam	UHGV-1351538_26	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1351538_26	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1351538_26	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_27	phrog_4433	81.4	1.8e-31	N/A	unknown function
eggNOG-mapper	UHGV-1351538_27	886882.PPSC2_p0363	124.0	1.46e-30	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1351538_27	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1351538_27	NF007410	N/A	N/A	N/A	N/A
KOfam	UHGV-1351538_28	K01449	50.0	0.00000000000005	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1351538_28	phrog_30550	144.3	4.49817e-43	N/A	unknown function
UniRef90	UHGV-1351538_28	UniRef90_A0A1Y4W1Z7	127.0	2.32e-33	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1351538_28	1519439.JPJG01000077_gene920	114.0	2.66e-30	Cell Wall Hydrolase	N/A
Pfam	UHGV-1351538_28	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-1351538_28	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_29	phrog_954	196.1	0	DNA methyltransferase	other
UniRef90	UHGV-1351538_29	UniRef90_A0A810Q0N4	275.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1351538_29	1280698.AUJS01000007_gene1028	273.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-1351538_29	MTase_II_00074	208.4	0	Type II methyltransferase	RM
Pfam	UHGV-1351538_29	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1351538_29	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-1351538_29	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
UniRef90	UHGV-1351538_30	UniRef90_UPI001880CD76	52.8	0.000000674	N/A	N/A
Pfam	UHGV-1351538_30	PF04448	N/A	N/A	N/A	DUF551
Pfam	UHGV-1351538_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1351538_36	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1351538_36	PF13560,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1351538_38	K00571	78.0	1.4e-22	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1351538_38	phrog_67	73.2	2.7e-21	DNA methyltransferase	other
UniRef90	UHGV-1351538_38	UniRef90_A0A8D9PDC5	282.0	0	Adenine specific DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1351538_38	1268240.ATFI01000007_gene431	162.0	0	DNA methylase	N/A
PADLOC	UHGV-1351538_38	MTase_II_00172	140.5	1.29998e-41	Type II methyltransferase	RM
Pfam	UHGV-1351538_38	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1351538_38	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1351538_38	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_39	phrog_2245	96.0	3.7e-28	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-1351538_39	428125.CLOLEP_01814	98.6	4.17e-24	COG NOG14118 non supervised orthologous group	N/A
PHROG	UHGV-1351538_43	phrog_4973	55.0	0.0000000000000013	N/A	unknown function
UniRef90	UHGV-1351538_43	UniRef90_A0A3D3Y0P8	73.6	0.00000000000000131	DNA-binding protein	N/A
Pfam	UHGV-1351538_43	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1351538_43	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
UniRef90	UHGV-1351538_45	UniRef90_A0A3C0NNN3	58.5	0.000000116	HTH psq-type domain-containing protein	N/A
KOfam	UHGV-1351538_46	K06909	134.9	7.29999e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1351538_46	phrog_979	141.2	2.8026e-43	terminase large subunit	head and packaging
UniRef90	UHGV-1351538_46	UniRef90_A0A3C0NMI6	630.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1351538_46	1410650.JHWL01000003_gene2834	555.0	0	N/A	N/A
Pfam	UHGV-1351538_46	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1351538_46	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1351538_46	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_47	phrog_156	294.6	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1351538_47	1410650.JHWL01000003_gene2833	496.0	0	N/A	N/A
structural_annotation	UHGV-1351538_47	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1351538_48	K07584	59.4	6.9e-17	N/A	N/A
PHROG	UHGV-1351538_48	phrog_4478	64.4	1.3e-18	peptidase	other
UniRef90	UHGV-1351538_48	UniRef90_A0A6N9P4C8	55.1	0.000000171	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1351538_48	1123009.AUID01000013_gene1737	48.9	0.00000761	Cysteine protease Prp	N/A
Pfam	UHGV-1351538_48	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1351538_48	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1351538_48	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_49	phrog_13908	175.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1351538_49	1410650.JHWL01000003_gene2831	95.9	9.12e-20	N/A	N/A
PHROG	UHGV-1351538_50	phrog_1357	199.3	0	major head protein	head and packaging
UniRef90	UHGV-1351538_50	UniRef90_A0A2V2CFL5	535.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1351538_50	1410650.JHWL01000003_gene2830	265.0	0	N/A	N/A
NCBIFam	UHGV-1351538_50	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1351538_50	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_51	phrog_15239	40.2	0.000000000051	N/A	unknown function
PHROG	UHGV-1351538_52	phrog_12105	109.3	2.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-1351538_52	1519439.JPJG01000060_gene1891	67.8	0.000000000000757	N/A	N/A
PHROG	UHGV-1351538_53	phrog_511	231.9	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1351538_53	1519439.JPJG01000060_gene1903	251.0	0	N/A	N/A
structural_annotation	UHGV-1351538_53	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1351538_54	phrog_24267	88.3	8.3e-26	N/A	unknown function
UniRef90	UHGV-1351538_54	UniRef90_A2HGS9	67.4	0.000000000583	Tail fiber protein, putative	N/A
eggNOG-mapper	UHGV-1351538_54	1042156.CXIVA_07170	105.0	6.22e-23	tail collar domain protein	N/A
COG	UHGV-1351538_54	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1351538_54	COG4675	N/A	N/A	N/A	N/A
UniRef90	UHGV-1351538_55	UniRef90_R7AZF7	115.0	8.13e-25	N/A	N/A
eggNOG-mapper	UHGV-1351538_55	1410650.JHWL01000003_gene2815	115.0	1.17e-25	N/A	N/A
PHROG	UHGV-1351538_56	phrog_21376	63.3	8.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-1351538_56	693746.OBV_01590	472.0	0	N/A	N/A
Pfam	UHGV-1351538_56	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-1351538_56	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
eggNOG-mapper	UHGV-1351538_57	1007096.BAGW01000031_gene143	56.2	0.00000557	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1351538_57	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-1351538_58	phrog_37900	241.3	0	N/A	unknown function
UniRef90	UHGV-1351538_58	UniRef90_UPI00110725F0	366.0	0	N/A	N/A
eggNOG-mapper	UHGV-1351538_58	552398.HMPREF0866_03098	207.0	0	N/A	N/A
Pfam	UHGV-1351538_58	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
COG	UHGV-1351538_58	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1351538_58	PF19190,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
UniRef90	UHGV-1351538_60	UniRef90_R6I1X1	196.0	0	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	N/A
eggNOG-mapper	UHGV-1351538_60	1203606.HMPREF1526_01926	76.6	0.00000000000000655	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1351538	Yes	42,422	51	100	1
UHGV-0195721	No	42,168	50	100	1
UHGV-1454608	No	43,006	50	99	1
UHGV-0124248	No	42,977	50	99	1
UHGV-1333042	No	42,977	50	99	1
UHGV-1493430	No	42,861	51	99	1
UHGV-1536632	No	34,812	50	80	1
UHGV-1487057	No	26,411	51	61	1
UHGV-1402483	No	25,982	50	60	1
UHGV-1567433	No	19,562	50	45	1
UHGV-1874102	No	14,703	50	34	1
UHGV-1847329	No	14,681	50	34	1
UHGV-0048614	No	12,313	50	28	1
UHGV-1619217	No	12,313	50	28	1
UHGV-1585963	No	11,780	53	27	1