vOTU vOTU-003687

vOTU: vOTU-003687

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-003687
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-03725 → vSUBGEN-25468 → vOTU-003687
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1333774
Biosample ID	N/A
Genome length (bp)	40,256 bps
CheckV completeness	100.00% (Complete)
CDS count	67
CDS density	89.71%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	114	Host agreement	98.25
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1333774_1	phrog_1863	60.7	1.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-1333774_1	748224.HMPREF9436_00408	94.7	5.23e-25	N/A	N/A
PHROG	UHGV-1333774_2	phrog_263	86.4	2e-25	holin	lysis
UniRef90	UHGV-1333774_2	UniRef90_A0A329UCA4	108.0	3.82e-29	Phage holin	N/A
eggNOG-mapper	UHGV-1333774_2	1121344.JHZO01000003_gene952	99.8	2.02e-26	SPP1 phage holin	N/A
Pfam	UHGV-1333774_2	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-1333774_2	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1333774_2	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_3	phrog_918	97.1	9.6e-29	N/A	unknown function
UniRef90	UHGV-1333774_3	UniRef90_UPI000EC62F11	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-1333774_3	411902.CLOBOL_05677	138.0	1.35996e-41	N/A	N/A
Pfam	UHGV-1333774_3	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1333774_3	PF19791	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333774_5	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_6	phrog_99	45.8	0.00000000000049	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1333774_6	742740.HMPREF9474_00056	101.0	6.2e-23	N/A	N/A
Pfam	UHGV-1333774_6	PF00847	N/A	N/A	AP2 domain	AP2
UniRef90	UHGV-1333774_8	UniRef90_A0A7X2P872	102.0	2.84e-25	Ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-1333774_8	1033733.CAEK01000007_gene1628	128.0	3.61e-36	N/A	N/A
Pfam	UHGV-1333774_8	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-1333774_8	PF03869,NF041793,COG4691	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_12	phrog_16490	94.7	4.4e-36	N/A	unknown function
eggNOG-mapper	UHGV-1333774_12	658655.HMPREF0988_00917	113.0	5.62e-27	N/A	N/A
eggNOG-mapper	UHGV-1333774_13	658655.HMPREF0988_00916	107.0	3.25e-28	N/A	N/A
eggNOG-mapper	UHGV-1333774_14	445972.ANACOL_01884	67.0	0.00000000000605	N/A	N/A
KOfam	UHGV-1333774_15	K14059	204.5	0	int; integrase	N/A
PHROG	UHGV-1333774_15	phrog_1	202.0	0	integrase	integration and excision
UniRef90	UHGV-1333774_15	UniRef90_A0A367GI93	256.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1333774_15	1507.HMPREF0262_00307	194.0	0	Phage integrase family	N/A
Pfam	UHGV-1333774_15	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-1333774_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1333774_15	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1333774_15	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1333774_16	UniRef90_A0A2A7B6N3	223.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1333774_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1333774_16	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333774_21	PF06776,COG5342	N/A	N/A	N/A	N/A
UniRef90	UHGV-1333774_23	UniRef90_A0A2A7AM72	101.0	8.3e-26	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1333774_23	1378168.N510_01712	60.1	0.00000000247	N/A	N/A
structural_annotation	UHGV-1333774_23	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333774_24	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_29	phrog_8	51.9	0.000000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-1333774_29	UniRef90_R5HHI4	70.5	0.0000000000000528	Predicted transcriptional regulators	N/A
eggNOG-mapper	UHGV-1333774_29	1230342.CTM_07211	67.4	0.00000000000316	B12 binding domain	N/A
Pfam	UHGV-1333774_29	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1333774_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1333774_29	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1333774_32	UniRef90_A0A098GES5	129.0	1.35e-36	Putative phage associated protein	N/A
structural_annotation	UHGV-1333774_32	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
COG	UHGV-1333774_36	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1333774_36	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_37	phrog_72	58.1	1.8e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1333774_37	411471.SUBVAR_05829	137.0	1.47e-38	N/A	N/A
structural_annotation	UHGV-1333774_37	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_38	phrog_7566	84.8	6.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-1333774_38	411471.SUBVAR_05830	90.1	5.29e-22	N/A	N/A
KOfam	UHGV-1333774_39	K03111	139.0	5.19994e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1333774_39	phrog_44	140.5	9.99967e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1333774_39	UniRef90_A0A2A7ALU9	234.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1333774_39	718252.FP2_05080	194.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1333774_39	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1333774_39	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1333774_39	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1333774_39	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1333774_39	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_40	phrog_6969	46.9	0.000000000000041	N/A	unknown function
UniRef90	UHGV-1333774_40	UniRef90_A0A7U9RQT4	76.6	0.00000000000376	N/A	N/A
eggNOG-mapper	UHGV-1333774_40	748224.HMPREF9436_00735	158.0	1.76564e-43	N/A	N/A
Pfam	UHGV-1333774_40	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-1333774_40	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1333774_40	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-1333774_42	K03496	222.6	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1333774_42	phrog_164	162.0	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1333774_42	UniRef90_A0A2A7B6H3	452.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-1333774_42	411471.SUBVAR_05839	239.0	0	AAA domain	N/A
Pfam	UHGV-1333774_42	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1333774_42	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1333774_42	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
UniRef90	UHGV-1333774_43	UniRef90_A0A845R8R0	108.0	9.39e-28	N/A	N/A
KOfam	UHGV-1333774_44	K03497	87.3	2.8e-25	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1333774_44	phrog_4715	126.0	2.9e-37	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1333774_44	UniRef90_A0A2A7B6Q0	288.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1333774_44	411471.SUBVAR_05842	198.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1333774_44	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1333774_44	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1333774_44	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333774_46	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_48	phrog_119	58.4	1.2e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1333774_48	UniRef90_A0A2A7AM49	229.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1333774_48	926561.KB900623_gene763	82.0	1.26e-18	HNH nucleases	N/A
COG	UHGV-1333774_48	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1333774_49	phrog_13845	60.0	3.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-1333774_49	1399942.U3PDR2_9CAUD	69.3	0.00000000000013	N/A	N/A
structural_annotation	UHGV-1333774_49	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_50	phrog_9	248.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1333774_50	UniRef90_A0A2A7ALT4	1011.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1333774_50	1235792.C808_00083	622.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1333774_50	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1333774_50	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1333774_50	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_51	phrog_12	108.0	7.3e-32	portal protein	head and packaging
UniRef90	UHGV-1333774_51	UniRef90_A0A2A7B6S8	484.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1333774_51	349161.Dred_2606	261.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1333774_51	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1333774_51	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1333774_51	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1333774_51	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1333774_52	K01358	90.8	2e-26	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1333774_52	phrog_94	138.8	5.60001e-41	head maturation protease	head and packaging
UniRef90	UHGV-1333774_52	UniRef90_A0A0H5SII2	165.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1333774_52	1232452.BAIB02000007_gene1626	153.0	2.08793e-43	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1333774_52	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1333774_52	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1333774_52	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_53	phrog_10	153.8	1.4013e-45	major head protein	head and packaging
UniRef90	UHGV-1333774_53	UniRef90_A0A2A7B712	604.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1333774_53	1235792.C808_00086	418.0	0	Phage capsid family	N/A
Pfam	UHGV-1333774_53	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-1333774_53	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1333774_53	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1333774_53	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1333774_53	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_54	phrog_749	50.9	0.000000000000024	N/A	unknown function
eggNOG-mapper	UHGV-1333774_54	1415774.U728_1251	70.9	0.0000000000000197	N/A	N/A
PHROG	UHGV-1333774_55	phrog_19734	101.8	5.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-1333774_55	349161.Dred_2602	77.4	1.57e-16	N/A	N/A
structural_annotation	UHGV-1333774_55	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1333774_56	1235798.C817_04588	59.3	0.000000000817	N/A	N/A
structural_annotation	UHGV-1333774_56	PF05657,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-1333774_57	UniRef90_A0A1C6FG30	121.0	8.65e-32	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1333774_57	1235798.C817_04589	97.8	1.79e-23	N/A	N/A
structural_annotation	UHGV-1333774_57	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_58	phrog_88	86.5	2.8e-25	major tail protein	tail
UniRef90	UHGV-1333774_58	UniRef90_UPI0018771F27	121.0	6.84e-31	phage tail protein	N/A
eggNOG-mapper	UHGV-1333774_58	1195236.CTER_5106	61.2	0.00000000655	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1333774_58	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1333774_58	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333774_58	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_61	phrog_9959	90.2	1.4e-26	tail length tape measure protein	tail
UniRef90	UHGV-1333774_61	UniRef90_A0A2A7ALS3	961.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1333774_61	1111131.HMPREF1255_1479	156.0	3.23e-36	phage tail tape measure protein	N/A
Pfam	UHGV-1333774_61	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1333774_61	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1333774_61	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1333774_61	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_62	phrog_33	76.0	9e-22	distal tail protein Dit	tail
UniRef90	UHGV-1333774_62	UniRef90_A0A2X2UUQ3	127.0	2.2e-32	Phage putative tail component	N/A
eggNOG-mapper	UHGV-1333774_62	931276.Cspa_c07550	73.2	0.00000000000079	tail component	N/A
COG	UHGV-1333774_62	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1333774_62	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_63	phrog_1067	216.7	0	minor head protein	head and packaging
UniRef90	UHGV-1333774_63	UniRef90_A0A2A7AM44	544.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1333774_63	1123263.AUKY01000068_gene489	215.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1333774_63	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1333774_63	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1333774_63	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1333774_63	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1333774_65	phrog_16313	87.9	1.6e-26	virion structural protein	head and packaging
COG	UHGV-1333774_65	COG0614	N/A	N/A	ABC-type Fe3+-hydroxamate transport system, periplasmic component	N/A
KOfam	UHGV-1333774_66	K07273	170.6	0	acm; lysozyme	N/A
PHROG	UHGV-1333774_66	phrog_291	137.6	1.10001e-40	endolysin	lysis
UniRef90	UHGV-1333774_66	UniRef90_UPI001D0EE7D8	276.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1333774_66	748224.HMPREF9436_00154	262.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1333774_66	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1333774_66	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1333774_66	PF01183,COG3757	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1333774	Yes	40,256	55	100	1
UHGV-1363915	No	40,123	55	100	1
UHGV-0134240	No	39,491	55	98	1
UHGV-1445288	No	26,648	55	66	1
UHGV-1379649	No	22,101	55	56	1
UHGV-1422210	No	21,963	55	55	1
UHGV-1776533	No	18,252	55	45	1
UHGV-1589394	No	17,993	54	44	1