vOTU vOTU-003859

vOTU: vOTU-003859

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-003859
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00157 → vSUBFAM-02061 → vGENUS-05973 → vSUBGEN-19976 → vOTU-003859
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0222820
Biosample ID	SAMEA4813774
Genome length (bp)	41,041 bps
CheckV completeness	100.00% (Complete)
CDS count	60
CDS density	93.56%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74	Total connections	14	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Ventricola → Ventricola sp900542395	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0222820_2	phrog_1067	178.1	0	minor head protein	head and packaging
UniRef90	UHGV-0222820_2	UniRef90_A0A1Q6PU45	246.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0222820_2	573061.Clocel_0223	101.0	6.58e-19	Phage minor structural protein	N/A
Pfam	UHGV-0222820_2	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
Pfam	UHGV-0222820_2	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0222820_2	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0222820_2	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0222820_2	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_3	phrog_33	71.4	2.2e-20	distal tail protein Dit	tail
UniRef90	UHGV-0222820_3	UniRef90_A0A110A7B6	139.0	2.36e-37	Phage tail protein	N/A
eggNOG-mapper	UHGV-0222820_3	439292.Bsel_2995	117.0	1.36e-29	tail component	N/A
COG	UHGV-0222820_3	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0222820_3	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_4	phrog_1535	107.6	1.1e-31	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0222820_4	742738.HMPREF9460_04078	248.0	0	domain protein	N/A
COG	UHGV-0222820_4	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
eggNOG-mapper	UHGV-0222820_5	411902.CLOBOL_03872	53.5	0.000000028	N/A	N/A
eggNOG-mapper	UHGV-0222820_6	1540257.JQMW01000009_gene3379	77.0	6.05e-17	N/A	N/A
structural_annotation	UHGV-0222820_6	PF17388	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_7	phrog_2175	57.4	3e-16	protein with Ig domain	other
eggNOG-mapper	UHGV-0222820_7	457421.CBFG_03714	99.8	9.35e-24	N/A	N/A
structural_annotation	UHGV-0222820_7	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0222820_8	PF06141,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_9	phrog_5	62.2	1.3e-17	tail completion or Neck1 protein	connector
UniRef90	UHGV-0222820_9	UniRef90_UPI000691EB78	100.0	3.05e-24	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0222820_9	1280689.AUJC01000007_gene3313	105.0	5.48e-27	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0222820_9	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0222820_9	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0222820_9	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_11	phrog_132	42.9	0.0000000000074	head-tail adaptor	connector
UniRef90	UHGV-0222820_11	UniRef90_UPI00058F125B	69.3	0.000000000000303	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0222820_11	1499683.CCFF01000017_gene2930	69.3	0.0000000000000509	Phage gp6-like head-tail connector protein	N/A
structural_annotation	UHGV-0222820_11	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_12	phrog_544	73.5	2.1e-21	major head protein	head and packaging
UniRef90	UHGV-0222820_12	UniRef90_A0A6N3FT63	153.0	6.83007e-41	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0222820_12	1123263.AUKY01000015_gene1612	168.0	0	N/A	N/A
structural_annotation	UHGV-0222820_12	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_13	phrog_172	81.4	1.6e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0222820_13	UniRef90_UPI00085C378A	90.9	2.71e-19	N/A	N/A
eggNOG-mapper	UHGV-0222820_13	996306.SSUR61_0987	53.1	0.00000537	N/A	N/A
Pfam	UHGV-0222820_13	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0222820_13	PF14265	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0222820_14	PF21279,NF040942	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_15	phrog_115	112.3	1.7e-37	minor head protein	head and packaging
UniRef90	UHGV-0222820_15	UniRef90_A0A644VRL0	162.0	1.62999e-41	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0222820_15	1280689.AUJC01000007_gene3319	108.0	1.81e-22	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0222820_15	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0222820_15	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0222820_15	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0222820_15	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_16	phrog_64	430.0	0	portal protein	head and packaging
UniRef90	UHGV-0222820_16	UniRef90_A0A136Q8M6	341.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0222820_16	1123250.KB908417_gene647	317.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0222820_16	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0222820_16	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0222820_16	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0222820_17	K06909	352.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0222820_17	phrog_3717	167.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0222820_17	UniRef90_A0A1M6MYR1	402.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0222820_17	203119.Cthe_2474	399.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0222820_17	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0222820_17	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0222820_17	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0222820_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0222820_17	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0222820_18	K07474	120.2	3e-35	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0222820_18	phrog_51	113.3	2.1e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0222820_18	UniRef90_A0A3A9BAU9	146.0	8.34053e-42	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0222820_18	1121344.JHZO01000003_gene978	133.0	2.83e-37	Terminase small subunit	N/A
Pfam	UHGV-0222820_18	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0222820_18	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0222820_18	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_19	phrog_36	83.0	4.3e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0222820_19	UniRef90_UPI001121E44A	84.0	6.99e-18	N/A	N/A
eggNOG-mapper	UHGV-0222820_19	1321786.HMPREF1992_00991	77.0	5.48e-16	sigma factor activity	N/A
Pfam	UHGV-0222820_19	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0222820_19	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0222820_19	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_20	phrog_3584	161.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0222820_20	1145276.T479_20115	117.0	6.97e-28	N/A	N/A
KOfam	UHGV-0222820_22	K03111	138.1	9.99995e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0222820_22	phrog_44	136.8	1.4e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0222820_22	UniRef90_A0A1V5KEV3	145.0	3.44019e-42	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0222820_22	1304880.JAGB01000002_gene2231	122.0	2.91e-34	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0222820_22	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0222820_22	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0222820_22	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0222820_22	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0222820_22	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0222820_24	596152.DesU5LDRAFT_1910	77.0	0.0000000000000111	N/A	N/A
structural_annotation	UHGV-0222820_24	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-0222820_27	K00390	52.6	0.0000000000000033	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0222820_27	phrog_2302	90.6	4.1e-29	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0222820_27	UniRef90_A0A6S6XHM1	253.0	0	PAPS_reduct domain-containing protein	N/A
Pfam	UHGV-0222820_27	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
structural_annotation	UHGV-0222820_27	PF01507,MF_00064,NF006327,COG3969	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_28	phrog_34599	213.8	0	N/A	unknown function
UniRef90	UHGV-0222820_28	UniRef90_M6UGW1	64.3	0.00000000678	Putative CRISPR type AFERR-associated protein Csf3	N/A
eggNOG-mapper	UHGV-0222820_28	1268303.RHODMAR_4878	74.7	0.000000000000241	N/A	N/A
PADLOC	UHGV-0222820_28	cluster2	149.1	5.04467e-44	Csf3_0_IV	CRISPR-CAS
structural_annotation	UHGV-0222820_28	PF09704,TIGR03116,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_29	phrog_22746	232.0	0	N/A	unknown function
UniRef90	UHGV-0222820_29	UniRef90_A0A7W0HHB2	174.0	0	CRISPR type IV-associated protein Csf2	N/A
eggNOG-mapper	UHGV-0222820_29	107636.JQNK01000009_gene1999	122.0	6.03e-30	crispr-associated protein	N/A
PADLOC	UHGV-0222820_29	cluster1	188.2	0	Csf2_0_IV	CRISPR-CAS
COG	UHGV-0222820_29	COG1857	N/A	N/A	CRISPR-Cas system type I effector complex subunit Cas7, RAMP superfamily	N/A
PADLOC	UHGV-0222820_30	icity0121	120.7	2e-35	Putative small subunit of type IV - was DinG	CRISPR-CAS
PADLOC	UHGV-0222820_31	cluster3	123.8	2.5e-36	Csf1_0_IV	CRISPR-CAS
structural_annotation	UHGV-0222820_31	TIGR03114	N/A	N/A	N/A	N/A
KOfam	UHGV-0222820_34	K00390	44.2	1.6e-21	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0222820_34	phrog_424	99.3	3.7e-29	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0222820_34	UniRef90_R6SWY4	306.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0222820_34	1256908.HMPREF0373_02094	268.0	0	Phosphoadenosine phosphosulfate reductase	N/A
Pfam	UHGV-0222820_34	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0222820_34	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0222820_34	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
COG	UHGV-0222820_35	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
Pfam	UHGV-0222820_36	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
COG	UHGV-0222820_36	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
PHROG	UHGV-0222820_40	phrog_190	83.6	2e-24	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0222820_40	UniRef90_UPI001EEE5EE3	94.7	1.02e-22	N/A	N/A
eggNOG-mapper	UHGV-0222820_40	399741.Spro_4945	83.6	4.11e-19	N/A	N/A
Pfam	UHGV-0222820_40	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0222820_40	PF06356,MF_04160,NF033179	N/A	N/A	N/A	N/A
Pfam	UHGV-0222820_43	PF02037	N/A	N/A	SAP domain	SAP
UniRef90	UHGV-0222820_44	UniRef90_UPI000F0634A0	71.6	0.00000000000000668	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0222820_44	1121091.AUMP01000003_gene2543	49.3	0.000000531	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0222820_44	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0222820_44	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0222820_45	K14056	52.2	0.0000000000000087	puuR; HTH-type transcriptional regulator, repressor for puuD	N/A
PHROG	UHGV-0222820_45	phrog_8	55.1	0.0000000000000017	transcriptional regulator	transcription regulation
UniRef90	UHGV-0222820_45	UniRef90_A0A353T137	70.5	0.000000000000461	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0222820_45	1280694.AUJQ01000003_gene1584	58.5	0.0000000237	Helix-turn-helix domain	N/A
Pfam	UHGV-0222820_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0222820_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0222820_47	UniRef90_A0A1Q6L177	66.2	0.0000000000778	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0222820_47	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0222820_48	K06400	295.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0222820_48	phrog_95	321.0	0	integrase	integration and excision
UniRef90	UHGV-0222820_48	UniRef90_A0A542AKB8	373.0	0	DNA invertase Pin-like site-specific DNA recombinase	N/A
eggNOG-mapper	UHGV-0222820_48	697281.Mahau_2563	362.0	0	resolvase	N/A
Pfam	UHGV-0222820_48	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0222820_48	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0222820_48	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0222820_48	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0222820_52	K07729	60.3	3.7e-17	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0222820_52	phrog_5823	49.9	0.000000000000031	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0222820_52	537007.BLAHAN_04265	50.1	0.00000554	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0222820_52	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0222820_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0222820_52	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_53	phrog_18108	75.4	7.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0222820_53	1116375.VEJY3_20916	58.5	0.0000000684	N/A	N/A
structural_annotation	UHGV-0222820_53	PF07443	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0222820_55	1038858.AXBA01000002_gene3728	61.6	0.0000000001	N/A	N/A
PHROG	UHGV-0222820_57	phrog_6918	66.5	3.5e-19	holin	lysis
UniRef90	UHGV-0222820_57	UniRef90_A0A847VZ28	72.0	0.0000000000000429	Holin	N/A
eggNOG-mapper	UHGV-0222820_57	1226322.HMPREF1545_03575	64.7	0.00000000000642	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0222820_57	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0222820_57	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_58	phrog_937	52.7	0.0000000000000087	hemolysin	other
PHROG	UHGV-0222820_59	phrog_2649	59.2	6.9e-17	endolysin	lysis
UniRef90	UHGV-0222820_59	UniRef90_A0A1V5Q5W6	285.0	0	Putative peptidoglycan binding domain protein	N/A
eggNOG-mapper	UHGV-0222820_59	1196322.A370_05608	62.8	0.0000000474	RHS repeat-associated core domain	N/A
Pfam	UHGV-0222820_59	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0222820_59	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0222820_59	PF18342,PF01471,PF00877,NF038080,COG4991,COG3409,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0222820_60	phrog_372	81.3	9e-24	tail protein	tail
UniRef90	UHGV-0222820_60	UniRef90_UPI000C8095D9	69.3	0.00000000838	N/A	N/A
eggNOG-mapper	UHGV-0222820_60	1416759.AYMR01000009_gene3061	92.0	1.07e-16	N/A	N/A
Pfam	UHGV-0222820_60	PF05895	N/A	N/A	N/A	DUF859

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0222820	Yes	41,041	55	100	1
UHGV-0124567	No	41,041	55	100	1
UHGV-1340922	No	41,041	55	100	1
UHGV-0090908	No	41,258	55	100	1
UHGV-2148137	No	11,670	52	28	1
UHGV-2155391	No	10,509	56	25	1