vOTU vOTU-003954

vOTU: vOTU-003954

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-003954
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00118 → vSUBFAM-02039 → vGENUS-05063 → vSUBGEN-09620 → vOTU-003954
Host lineage	Bacteria → Firmicutes_A → Clostridia → UMGS1810 → UMGS1810 → RGIG4708 → ERR7746465_bin.39
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0026427
Biosample ID	SAMEA4766020
Genome length (bp)	37,228 bps
CheckV completeness	100.00% (Complete)
CDS count	66
CDS density	92.88%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → UMGS1810 → UMGS1810 → RGIG4708 → ERR7746465_bin.39	Total connections	3	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0026427_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0026427_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0026427_4	phrog_19106	199.0	0	N/A	unknown function
UniRef90	UHGV-0026427_4	UniRef90_A0A6L5YG76	211.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0026427_4	658655.HMPREF0988_00875	176.0	0	N/A	N/A
structural_annotation	UHGV-0026427_4	TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_5	phrog_18107	83.3	3.7e-24	N/A	unknown function
UniRef90	UHGV-0026427_5	UniRef90_UPI0004855F5F	79.7	0.00000000000000285	N/A	N/A
eggNOG-mapper	UHGV-0026427_5	1200557.JHWV01000001_gene292	79.7	4.78e-16	N/A	N/A
structural_annotation	UHGV-0026427_5	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_7	phrog_2872	244.2	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026427_7	UniRef90_A0A8J6JIF1	273.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0026427_7	754027.HMPREF9554_00709	226.0	0	N/A	N/A
Pfam	UHGV-0026427_7	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0026427_7	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026427_10	UniRef90_A0A4V2SE35	48.9	0.00000602	DNA-binding XRE family transcriptional regulator	N/A
Pfam	UHGV-0026427_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0026427_10	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0026427_13	K06909	79.1	6.5e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0026427_13	phrog_2	118.6	8.6e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0026427_13	UniRef90_R5GI85	247.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0026427_13	1329516.JPST01000014_gene657	182.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0026427_13	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0026427_13	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0026427_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0026427_13	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_14	phrog_533	75.7	4.3e-22	portal protein	head and packaging
structural_annotation	UHGV-0026427_14	PF05133,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026427_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_16	phrog_544	168.2	0	major head protein	head and packaging
UniRef90	UHGV-0026427_16	UniRef90_A0A6B9SRJ5	366.0	0	Putative head protein	N/A
eggNOG-mapper	UHGV-0026427_16	1347392.CCEZ01000005_gene1236	218.0	0	N/A	N/A
structural_annotation	UHGV-0026427_16	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_17	phrog_390	74.1	1.8e-21	Arc-like repressor	transcription regulation
UniRef90	UHGV-0026427_17	UniRef90_A0A3N5YZ51	79.7	4.2e-18	Rho termination protein	N/A
eggNOG-mapper	UHGV-0026427_17	1197953.I6T7M8_9CAUD	75.1	7.19e-17	DNA-dependent transcription, termination	N/A
PHROG	UHGV-0026427_18	phrog_541	48.7	0.00000000000014	head-tail adaptor	connector
PHROG	UHGV-0026427_19	phrog_3366	64.5	2.2e-18	N/A	unknown function
structural_annotation	UHGV-0026427_20	PF16724	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026427_21	PF11114	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026427_22	665956.HMPREF1032_03060	65.9	0.0000000000508	N/A	N/A
structural_annotation	UHGV-0026427_22	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_24	phrog_706	83.9	2.1e-24	N/A	unknown function
UniRef90	UHGV-0026427_24	UniRef90_UPI00164D7633	114.0	2.26e-28	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0026427_24	693746.OBV_18170	120.0	1.34e-31	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0026427_24	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0026427_24	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-0026427_25	K20361	44.2	0.000000000001	USO1; intracellular protein transport protein USO1	N/A
PHROG	UHGV-0026427_25	phrog_31409	129.5	3e-38	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0026427_25	1414720.CBYM010000002_gene562	116.0	1.16e-23	phage tail tape measure protein	N/A
COG	UHGV-0026427_25	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026427_25	PF11172	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026427_26	411902.CLOBOL_00125	62.8	0.000000000107	N/A	N/A
structural_annotation	UHGV-0026427_26	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_27	phrog_13879	170.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0026427_27	693746.OBV_18210	187.0	0	N/A	N/A
structural_annotation	UHGV-0026427_27	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_28	phrog_18725	46.0	0.00000000000073	N/A	unknown function
eggNOG-mapper	UHGV-0026427_28	1120746.CCNL01000014_gene2212	52.0	0.00000202	N/A	N/A
PHROG	UHGV-0026427_31	phrog_5302	227.4	0	tail protein	tail
eggNOG-mapper	UHGV-0026427_31	411470.RUMGNA_00248	238.0	0	Phage tail-collar fibre protein	N/A
COG	UHGV-0026427_31	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0026427_33	phrog_134	49.5	0.000000000000058	N/A	unknown function
UniRef90	UHGV-0026427_33	UniRef90_A0A4Y7WEE6	47.0	0.00000731	XkdX family protein	N/A
Pfam	UHGV-0026427_33	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0026427_33	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
KOfam	UHGV-0026427_35	K08640	101.0	1.4e-29	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0026427_35	phrog_894	111.4	7.9e-33	endolysin	lysis
eggNOG-mapper	UHGV-0026427_35	657322.FPR_27200	138.0	1.92e-37	Peptidase M15A	N/A
Pfam	UHGV-0026427_35	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-0026427_35	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0026427_35	COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_36	phrog_1129	72.7	3.2e-21	holin	lysis
UniRef90	UHGV-0026427_36	UniRef90_A0A1M6MLQ1	136.0	3.89e-40	Phage holin family Hol44, holin superfamily V	N/A
eggNOG-mapper	UHGV-0026427_36	1449050.JNLE01000003_gene3454	128.0	7.53e-38	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0026427_36	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0026427_36	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026427_39	UniRef90_A0A843IZ65	88.6	1.15e-21	Sigma70_r4 domain-containing protein	N/A
structural_annotation	UHGV-0026427_39	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_41	phrog_3754	93.3	2.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0026427_41	1226322.HMPREF1545_00073	143.0	1.04957e-42	N/A	N/A
PHROG	UHGV-0026427_42	phrog_21718	92.8	3.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0026427_42	476272.RUMHYD_01768	65.1	0.0000000000494	N/A	N/A
PHROG	UHGV-0026427_43	phrog_22984	59.1	8e-17	N/A	unknown function
PHROG	UHGV-0026427_44	phrog_16490	65.3	4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0026427_44	1408437.JNJN01000043_gene803	105.0	8.47e-25	N/A	N/A
PHROG	UHGV-0026427_45	phrog_20016	146.1	9.52883e-44	N/A	unknown function
eggNOG-mapper	UHGV-0026427_45	1226322.HMPREF1545_00077	122.0	6.52e-34	N/A	N/A
structural_annotation	UHGV-0026427_45	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026427_46	PF12510	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026427_51	PF08207	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_56	phrog_10714	45.6	0.0000000000013	N/A	unknown function
PHROG	UHGV-0026427_57	phrog_8684	94.8	7.4e-28	N/A	unknown function
UniRef90	UHGV-0026427_57	UniRef90_R0BRM0	111.0	5.2e-28	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0026427_57	1121097.JCM15093_2710	83.2	4.37e-18	YopX protein	N/A
Pfam	UHGV-0026427_57	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0026427_57	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0026427_57	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-0026427_60	K00390	76.1	4.6e-22	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0026427_60	phrog_424	159.3	0	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0026427_60	UniRef90_A0A7C6XWI3	383.0	0	Phosphoadenosine phosphosulfate reductase family protein (Fragment)	N/A
eggNOG-mapper	UHGV-0026427_60	742823.HMPREF9465_01257	348.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-0026427_60	BrxP_00001	43.7	1.6e-16	BrxP	BREX
Pfam	UHGV-0026427_60	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0026427_60	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0026427_60	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_61	phrog_37916	45.5	0.0000000000011	N/A	unknown function
PHROG	UHGV-0026427_64	phrog_1313	345.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026427_64	UniRef90_A0A1V5XFC1	457.0	0	Virulence-associated protein E	N/A
eggNOG-mapper	UHGV-0026427_64	748727.CLJU_c36530	242.0	0	virulence-associated E family protein	N/A
Pfam	UHGV-0026427_64	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0026427_64	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0026427_64	PF05272,MF_00016,NF005477,COG5545	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026427_65	1203606.HMPREF1526_00240	134.0	1.09e-39	N/A	N/A
structural_annotation	UHGV-0026427_65	PF18419	N/A	N/A	N/A	N/A
PHROG	UHGV-0026427_66	phrog_11992	76.7	4.6e-22	N/A	unknown function
UniRef90	UHGV-0026427_66	UniRef90_A0A1E7S564	82.8	3.51e-17	DNA primase	N/A
eggNOG-mapper	UHGV-0026427_66	903814.ELI_1276	82.8	5.88e-18	DNA primase activity	N/A
Pfam	UHGV-0026427_66	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0026427_66	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0026427	Yes	37,228	39	100	1
UHGV-0022782	No	37,228	39	100	1