vOTU vOTU-004175

vOTU: vOTU-004175

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-004175
Number of genomes	3
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-04497 → vGENUS-07677 → vSUBGEN-06225 → vOTU-004175
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0346718
Biosample ID	SAMEA104112267
Genome length (bp)	36,425 bps
CheckV completeness	100.00% (Complete)
CDS count	60
CDS density	91.44%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	102	Host agreement	90.2
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0346718_2	phrog_18716	142.7	8.50588e-43	N/A	unknown function
UniRef90	UHGV-0346718_2	UniRef90_UPI001A9A586B	140.0	4.08001e-40	N/A	N/A
eggNOG-mapper	UHGV-0346718_2	665959.HMPREF1013_00856	136.0	7.74999e-40	N/A	N/A
Pfam	UHGV-0346718_2	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0346718_2	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_3	phrog_2412	48.9	6.7e-18	N/A	unknown function
UniRef90	UHGV-0346718_3	UniRef90_A0A8B6LDF0	55.5	0.000000107	N/A	N/A
eggNOG-mapper	UHGV-0346718_3	556268.OFAG_00320	52.4	0.000000636	N/A	N/A
Pfam	UHGV-0346718_3	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
PHROG	UHGV-0346718_4	phrog_30251	550.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0346718_4	UniRef90_UPI001897AD9D	535.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0346718_4	1122918.KB907248_gene4504	517.0	0	Terminase-like family	N/A
Pfam	UHGV-0346718_4	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0346718_4	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0346718_4	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0346718_4	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0346718_4	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_5	phrog_64	154.7	0	portal protein	head and packaging
UniRef90	UHGV-0346718_5	UniRef90_UPI0018A8A301	451.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0346718_5	1256908.HMPREF0373_00485	77.4	0.00000000000248	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0346718_5	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0346718_5	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_7	phrog_595	102.5	5.8e-30	head maturation protease	head and packaging
UniRef90	UHGV-0346718_7	UniRef90_A0A3A9EHQ6	242.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0346718_7	764299.STRIC_1442	58.2	0.00000102	Phage Mu protein F like protein	N/A
Pfam	UHGV-0346718_7	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0346718_7	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0346718_7	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_8	phrog_5	57.3	4.6e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0346718_8	UniRef90_UPI0009E96199	106.0	2.88e-27	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0346718_8	1504822.CCNO01000013_gene284	97.1	9.32e-25	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0346718_8	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0346718_8	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_9	phrog_59	147.0	6.16571e-44	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0346718_9	UniRef90_UPI000CF6E83F	159.0	0	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0346718_9	1423814.HMPREF0549_1779	137.0	4.37e-38	NUMOD4 motif	N/A
PADLOC	UHGV-0346718_9	HEase_00016	103.1	1.9e-30	homing endonuclease	RM
Pfam	UHGV-0346718_9	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0346718_9	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-0346718_9	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
structural_annotation	UHGV-0346718_9	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
UniRef90	UHGV-0346718_10	UniRef90_R6C6L8	81.3	8.08e-16	Fibronectin autolysin	N/A
structural_annotation	UHGV-0346718_10	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_11	phrog_544	172.4	0	major head protein	head and packaging
UniRef90	UHGV-0346718_11	UniRef90_A0A6B9SRJ5	377.0	0	Putative head protein	N/A
eggNOG-mapper	UHGV-0346718_11	1347392.CCEZ01000005_gene1236	219.0	0	N/A	N/A
structural_annotation	UHGV-0346718_11	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_12	phrog_1574	51.6	0.000000000000014	N/A	unknown function
UniRef90	UHGV-0346718_12	UniRef90_A0A2D6RK66	67.4	0.000000000415	Glyco_trans_2-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0346718_12	491915.Aflv_2574	60.5	0.0000000635	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC	N/A
Pfam	UHGV-0346718_12	PF03452	N/A	N/A	Anp1	Anp1
COG	UHGV-0346718_12	COG1216	N/A	N/A	Glycosyltransferase, GT2 family	N/A
structural_annotation	UHGV-0346718_12	PF13712,MF_00624,TIGR01556,COG1216	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_13	phrog_3673	75.4	4.5e-22	Arc-like repressor	transcription regulation
UniRef90	UHGV-0346718_13	UniRef90_A0A2K4DPB8	67.0	0.000000000000588	Rho termination factor domain-containing protein	N/A
eggNOG-mapper	UHGV-0346718_13	1197953.I6T7M8_9CAUD	65.1	0.000000000000566	DNA-dependent transcription, termination	N/A
PHROG	UHGV-0346718_15	phrog_17977	94.0	9.2e-28	N/A	unknown function
UniRef90	UHGV-0346718_15	UniRef90_UPI00141211AB	156.0	0	head-tail adaptor protein	N/A
Pfam	UHGV-0346718_15	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0346718_15	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_16	phrog_17405	53.2	0.0000000000000051	head protein	head and packaging
structural_annotation	UHGV-0346718_16	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_17	phrog_885	83.0	3.3e-24	major tail protein	tail
UniRef90	UHGV-0346718_17	UniRef90_A0A843J9F0	222.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0346718_17	1504822.CCNO01000012_gene492	254.0	0	N/A	N/A
structural_annotation	UHGV-0346718_17	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_20	phrog_6900	287.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0346718_20	1499683.CCFF01000017_gene2565	328.0	0	tape measure	N/A
COG	UHGV-0346718_20	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0346718_20	PF20155,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0346718_21	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_22	phrog_3558	220.1	0	tail protein	tail
UniRef90	UHGV-0346718_22	UniRef90_A0A3D1VAY1	237.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0346718_22	877414.ATWA01000019_gene2050	164.0	5.13996e-41	Phage minor structural protein	N/A
Pfam	UHGV-0346718_22	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0346718_22	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0346718_22	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0346718_22	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_23	phrog_24267	101.6	1.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-0346718_23	508419.F8J176_9CAUD	125.0	2.99e-27	peptidoglycan catabolic process	N/A
KOfam	UHGV-0346718_24	K01447	71.4	1.7e-20	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0346718_24	phrog_1794	146.9	1.69557e-43	amidase	lysis
UniRef90	UHGV-0346718_24	UniRef90_A0A644YKI6	239.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0346718_24	1235793.C809_04312	214.0	0	Ami_2	N/A
Pfam	UHGV-0346718_24	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0346718_24	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0346718_24	PF01510,MF_04111,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_25	phrog_962	82.5	5.7e-24	holin	lysis
UniRef90	UHGV-0346718_25	UniRef90_UPI001655FC48	103.0	4.88e-27	phage holin	N/A
eggNOG-mapper	UHGV-0346718_25	553973.CLOHYLEM_04415	102.0	2.28e-27	Bacteriophage holin	N/A
Pfam	UHGV-0346718_25	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0346718_25	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0346718_25	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0346718_25	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_28	phrog_7339	97.4	1.3e-28	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0346718_28	UniRef90_A0A7C6W8G9	294.0	0	Metallophos domain-containing protein	N/A
eggNOG-mapper	UHGV-0346718_28	1150474.JQJI01000006_gene784	92.0	2.57e-19	metallophosphoesterase	N/A
Pfam	UHGV-0346718_28	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0346718_28	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-0346718_28	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
Pfam	UHGV-0346718_29	PF14359	N/A	N/A	N/A	DUF4406
PHROG	UHGV-0346718_30	phrog_3754	85.7	5.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0346718_30	476272.RUMHYD_01764	143.0	1.81048e-42	N/A	N/A
PHROG	UHGV-0346718_31	phrog_21718	89.2	4.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0346718_31	397290.C810_05210	63.9	0.000000000179	N/A	N/A
PHROG	UHGV-0346718_32	phrog_22984	41.0	0.000000000036	N/A	unknown function
PHROG	UHGV-0346718_33	phrog_16490	87.2	5.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-0346718_33	397290.C810_01328	90.5	2.14e-18	N/A	N/A
PHROG	UHGV-0346718_34	phrog_20016	153.2	0	N/A	unknown function
UniRef90	UHGV-0346718_34	UniRef90_A0A2Z4QB67	137.0	9.01e-39	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0346718_34	1226322.HMPREF1545_00077	131.0	3.03e-37	N/A	N/A
structural_annotation	UHGV-0346718_34	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0346718_35	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0346718_37	K05925	84.7	1.4e-24	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	N/A
PHROG	UHGV-0346718_37	phrog_359	227.1	0	DNA methyltransferase	other
UniRef90	UHGV-0346718_37	UniRef90_A0A3E3DUV0	214.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0346718_37	665950.HMPREF1025_01456	199.0	0	MT-A70	N/A
PADLOC	UHGV-0346718_37	MTase_II_00048	220.1	0	Type II methyltransferase	RM
Pfam	UHGV-0346718_37	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-0346718_37	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-0346718_37	PF05063,MF_01872,NF010253,COG4725	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_40	phrog_2872	248.4	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0346718_40	UniRef90_A0A8J6JIF1	276.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0346718_40	754027.HMPREF9554_00709	234.0	0	N/A	N/A
Pfam	UHGV-0346718_40	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0346718_40	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_42	phrog_18107	81.9	1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0346718_42	476272.RUMHYD_02831	167.0	0	N/A	N/A
structural_annotation	UHGV-0346718_42	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_44	phrog_19106	148.3	4.06377e-44	N/A	unknown function
UniRef90	UHGV-0346718_44	UniRef90_A0A412EKN4	152.0	3.27904e-43	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0346718_44	658655.HMPREF0988_00875	118.0	7.1e-31	N/A	N/A
Pfam	UHGV-0346718_44	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
structural_annotation	UHGV-0346718_44	TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-0346718_45	K02316	80.5	2.3e-23	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0346718_45	phrog_11992	123.9	1.4e-36	N/A	unknown function
UniRef90	UHGV-0346718_45	UniRef90_A0A810QG37	105.0	9.03e-25	ZnF_CHCC domain-containing protein	N/A
eggNOG-mapper	UHGV-0346718_45	742738.HMPREF9460_02494	103.0	2.69e-25	CHC2 zinc finger	N/A
PADLOC	UHGV-0346718_45	drt-cluster192	58.6	1.6e-16	DRT	DRT
Pfam	UHGV-0346718_45	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0346718_45	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0346718_45	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_46	phrog_8841	491.1	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0346718_46	UniRef90_UPI000C07D7A2	584.0	0	N/A	N/A
eggNOG-mapper	UHGV-0346718_46	742738.HMPREF9460_02495	475.0	0	N/A	N/A
Pfam	UHGV-0346718_46	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0346718_46	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0346718_46	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0346718_46	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0346718_47	K06198	100.0	3.9e-29	coiA; competence protein CoiA	N/A
UniRef90	UHGV-0346718_47	UniRef90_A0A177H6X0	95.5	2.5e-20	Competence protein CoiA-like family protein	N/A
eggNOG-mapper	UHGV-0346718_47	1239962.C943_04232	92.8	9.69e-20	Competence protein	N/A
Pfam	UHGV-0346718_47	PF06054	N/A	N/A	Competence protein CoiA-like family	CoiA
COG	UHGV-0346718_47	COG4469	N/A	N/A	Competence protein CoiA, contains predicted nuclease domain	N/A
Pfam	UHGV-0346718_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0346718_49	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
UniRef90	UHGV-0346718_50	UniRef90_UPI001A9B9FB4	263.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0346718_50	742735.HMPREF9467_00909	202.0	0	N/A	N/A
Pfam	UHGV-0346718_50	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0346718_50	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0346718_56	phrog_3392	110.2	1.8e-32	N/A	unknown function
UniRef90	UHGV-0346718_56	UniRef90_Q6J807	81.6	2.3e-16	Pas24	N/A
eggNOG-mapper	UHGV-0346718_56	1217710.F969_00044	113.0	1.2e-27	N/A	N/A
PHROG	UHGV-0346718_60	phrog_474	113.8	2.3e-33	phosphofructokinase	other
UniRef90	UHGV-0346718_60	UniRef90_A0A7V6W4J9	113.0	2.13e-30	N/A	N/A
eggNOG-mapper	UHGV-0346718_60	665956.HMPREF1032_00639	112.0	1.29e-30	N/A	N/A
Pfam	UHGV-0346718_60	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0346718_60	PF19905	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0346718	Yes	36,425	47	100	1
UHGV-1376779	No	36,425	47	100	1
UHGV-0065680	No	34,837	47	96	1