vOTU vOTU-004188

vOTU: vOTU-004188

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-004188
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-04970 → vGENUS-09764 → vSUBGEN-11914 → vOTU-004188
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA737
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0189644
Biosample ID	N/A
Genome length (bp)	40,393 bps
CheckV completeness	100.00% (Complete)
CDS count	48
CDS density	94.11%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA737	Total connections	8	Host agreement	75
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1279 → UMGS1279 sp900550315	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0189644_1	742735.HMPREF9467_00844	97.8	1.86e-22	N/A	N/A
KOfam	UHGV-0189644_2	K07727	83.4	4.1e-24	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0189644_2	phrog_38620	48.6	0.00000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0189644_2	UniRef90_UPI00118473B2	81.6	6.12e-19	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0189644_2	1268622.AVS7_02299	65.1	0.000000000000328	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0189644_2	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0189644_2	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0189644_2	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0189644_4	UniRef90_A0A2J4JRR6	67.0	0.000000000000375	Toxin-antitoxin system, antitoxin component, Xre family protein	N/A
eggNOG-mapper	UHGV-0189644_4	526218.Sterm_3925	55.1	0.00000000302	N/A	N/A
Pfam	UHGV-0189644_4	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0189644_4	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0189644_5	K01356	123.0	3.8e-36	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0189644_5	phrog_4	128.9	4.1e-38	transcriptional repressor	transcription regulation
UniRef90	UHGV-0189644_5	UniRef90_R6MAH2	281.0	0	LexA repressor	N/A
eggNOG-mapper	UHGV-0189644_5	883109.HMPREF0380_00272	127.0	1.3e-33	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0189644_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0189644_5	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0189644_5	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0189644_5	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
COG	UHGV-0189644_7	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
PHROG	UHGV-0189644_8	phrog_14556	49.1	0.000000000000053	N/A	unknown function
eggNOG-mapper	UHGV-0189644_8	572547.Amico_1146	69.3	0.0000000000934	PFAM Endonuclease Exonuclease phosphatase	N/A
COG	UHGV-0189644_8	COG2374	N/A	N/A	Predicted extracellular nuclease	N/A
KOfam	UHGV-0189644_9	K14059	241.9	0	int; integrase	N/A
PHROG	UHGV-0189644_9	phrog_1	211.8	0	integrase	integration and excision
UniRef90	UHGV-0189644_9	UniRef90_A0A2V2E7R6	419.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0189644_9	1095750.HMPREF9970_0588	155.0	2.37997e-41	Arm DNA-binding domain	N/A
Pfam	UHGV-0189644_9	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0189644_9	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0189644_9	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0189644_9	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0189644_10	K01448	161.4	0	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0189644_10	phrog_435	158.3	0	endolysin	lysis
UniRef90	UHGV-0189644_10	UniRef90_UPI0018992E37	249.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0189644_10	1203606.HMPREF1526_00346	230.0	0	Ami_3	N/A
Pfam	UHGV-0189644_10	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0189644_10	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0189644_10	PF01520,PF18342,MF_00562,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0189644_11	phrog_263	97.0	8.5e-29	holin	lysis
UniRef90	UHGV-0189644_11	UniRef90_A0A1F8V0V3	108.0	4.45e-29	Phage holin	N/A
eggNOG-mapper	UHGV-0189644_11	748224.HMPREF9436_00409	76.6	2.1e-17	SPP1 phage holin	N/A
Pfam	UHGV-0189644_11	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0189644_11	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0189644_11	PF04688	N/A	N/A	N/A	N/A
PHROG	UHGV-0189644_12	phrog_937	50.9	0.00000000000003	hemolysin	other
eggNOG-mapper	UHGV-0189644_14	411459.RUMOBE_01721	57.4	0.00000735	N/A	N/A
PHROG	UHGV-0189644_15	phrog_22978	855.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0189644_15	1410650.JHWL01000003_gene2814	264.0	0	N/A	N/A
eggNOG-mapper	UHGV-0189644_16	1410650.JHWL01000003_gene2815	90.5	2.66e-17	N/A	N/A
Pfam	UHGV-0189644_17	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
PHROG	UHGV-0189644_18	phrog_511	199.1	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0189644_18	1410650.JHWL01000003_gene2827	341.0	0	N/A	N/A
structural_annotation	UHGV-0189644_18	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0189644_19	phrog_12105	85.7	4.8e-25	N/A	unknown function
PHROG	UHGV-0189644_20	phrog_15239	44.4	0.0000000000024	N/A	unknown function
PHROG	UHGV-0189644_21	phrog_1357	218.8	0	major head protein	head and packaging
UniRef90	UHGV-0189644_21	UniRef90_UPI00047AA53B	414.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0189644_21	1410650.JHWL01000003_gene2830	414.0	0	N/A	N/A
Pfam	UHGV-0189644_21	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0189644_21	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0189644_21	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0189644_22	phrog_13908	178.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0189644_22	1410650.JHWL01000003_gene2831	134.0	3.55e-34	N/A	N/A
KOfam	UHGV-0189644_23	K07584	47.7	0.00000000000026	N/A	N/A
PHROG	UHGV-0189644_23	phrog_4478	51.4	0.000000000000013	peptidase	other
UniRef90	UHGV-0189644_23	UniRef90_R5J236	56.6	0.0000000548	Putative ribosomal protein	N/A
eggNOG-mapper	UHGV-0189644_23	1105031.HMPREF1141_3106	54.3	0.0000000462	Cysteine protease Prp	N/A
Pfam	UHGV-0189644_23	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0189644_23	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0189644_23	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0189644_24	phrog_156	327.5	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0189644_24	1410650.JHWL01000003_gene2833	541.0	0	N/A	N/A
structural_annotation	UHGV-0189644_24	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0189644_25	K06909	134.8	7.80001e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0189644_25	phrog_979	141.0	3.09687e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0189644_25	UniRef90_UPI0006875436	645.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0189644_25	1410650.JHWL01000003_gene2834	645.0	0	N/A	N/A
Pfam	UHGV-0189644_25	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0189644_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0189644_25	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0189644_26	phrog_2412	75.1	9.3e-22	N/A	unknown function
UniRef90	UHGV-0189644_26	UniRef90_R5AAQ5	75.5	0.00000000000000535	N/A	N/A
eggNOG-mapper	UHGV-0189644_26	226185.EF_2113	65.9	0.00000000000561	Stress-induced bacterial acidophilic repeat motif	N/A
eggNOG-mapper	UHGV-0189644_28	318464.IO99_07375	77.0	5.1e-17	N/A	N/A
PHROG	UHGV-0189644_37	phrog_8841	455.0	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0189644_37	UniRef90_A0A3E2X397	464.0	0	N/A	N/A
eggNOG-mapper	UHGV-0189644_37	1298920.KI911353_gene4866	439.0	0	N/A	N/A
Pfam	UHGV-0189644_37	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0189644_37	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0189644_37	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0189644_37	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0189644_38	K02316	85.9	5.1e-25	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0189644_38	phrog_11992	111.0	1.2e-32	N/A	unknown function
UniRef90	UHGV-0189644_38	UniRef90_A5KP85	93.6	4.83e-21	CHC2 zinc finger domain protein	N/A
eggNOG-mapper	UHGV-0189644_38	411460.RUMTOR_02069	93.6	8.1e-22	CHC2 zinc finger	N/A
PADLOC	UHGV-0189644_38	drt-cluster192	62.9	7.3e-18	DRT	DRT
Pfam	UHGV-0189644_38	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0189644_38	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0189644_38	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-0189644_39	phrog_3490	142.2	2.59941e-42	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0189644_39	UniRef90_UPI000F530A03	207.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0189644_39	357809.Cphy_2986	198.0	0	N/A	N/A
Pfam	UHGV-0189644_39	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0189644_39	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0189644_40	K03111	112.3	6.5e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0189644_40	phrog_44	126.9	1.6e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0189644_40	UniRef90_A0A1K1WZF7	123.0	1.41e-33	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0189644_40	641112.ACOK01000116_gene2637	119.0	8.47e-33	Single-strand binding protein family	N/A
Pfam	UHGV-0189644_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0189644_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0189644_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0189644_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0189644_40	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0189644_41	phrog_1227	247.9	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0189644_41	UniRef90_A0A3D0X749	319.0	0	N/A	N/A
eggNOG-mapper	UHGV-0189644_41	861454.HMPREF9099_00347	259.0	0	N/A	N/A
Pfam	UHGV-0189644_41	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0189644_41	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0189644_41	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0189644_42	phrog_21613	120.3	1.1e-35	N/A	unknown function
eggNOG-mapper	UHGV-0189644_42	1120998.AUFC01000030_gene2214	171.0	0	N/A	N/A
structural_annotation	UHGV-0189644_46	PF11372	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0189644	Yes	40,393	46	100	1
UHGV-0211443	No	40,339	46	100	1