vOTU vOTU-004213

vOTU: vOTU-004213

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-004213
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00155 → vSUBFAM-00348 → vGENUS-00561 → vSUBGEN-00339 → vOTU-004213
Host lineage
Host range breadth
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0034002
Biosample ID	SAMEA4766372
Genome length (bp)	44,042 bps
CheckV completeness	100.00% (Complete)
CDS count	65
CDS density	93.17%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0034002_2	PF07754,NF011481,COG2888	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034002_3	PF10762,NF007968	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034002_4	PF13973,TIGR00739,COG4481	N/A	N/A	N/A	N/A
KOfam	UHGV-0034002_7	K06909	138.7	5.29999e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0034002_7	phrog_10250	139.2	2.4e-41	N/A	unknown function
UniRef90	UHGV-0034002_7	UniRef90_A0A8D9PDX0	694.0	0	Large terminase	N/A
eggNOG-mapper	UHGV-0034002_7	1329516.JPST01000014_gene657	322.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0034002_7	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0034002_7	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0034002_7	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0034002_7	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_8	phrog_533	88.9	4.1e-26	portal protein	head and packaging
UniRef90	UHGV-0034002_8	UniRef90_A0A8D9PDR4	769.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0034002_8	86416.Clopa_2538	268.0	0	PFAM Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0034002_8	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0034002_8	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034002_9	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_10	phrog_31538	44.6	0.0000000000026	N/A	unknown function
eggNOG-mapper	UHGV-0034002_10	428125.CLOLEP_01433	58.9	0.000000000434	N/A	N/A
PHROG	UHGV-0034002_11	phrog_13589	162.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0034002_11	428125.CLOLEP_01434	213.0	0	N/A	N/A
PHROG	UHGV-0034002_12	phrog_35892	73.7	1.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0034002_12	5759.rna_EHI_115500-1	58.9	0.00000118	Leucine rich repeats (6 copies)	N/A
Pfam	UHGV-0034002_12	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
structural_annotation	UHGV-0034002_12	PF13306,NF041351	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_13	phrog_194	47.6	0.0000000000000029	head scaffolding protein	head and packaging
UniRef90	UHGV-0034002_13	UniRef90_A0A8D9PDR7	211.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-0034002_13	1401067.HMPREF0872_00300	53.1	0.00000698	Phage minor structural protein GP20	N/A
Pfam	UHGV-0034002_13	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0034002_13	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_14	phrog_247	244.0	0	major head protein	head and packaging
UniRef90	UHGV-0034002_14	UniRef90_A0A3D0LY55	353.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-0034002_14	1304866.K413DRAFT_3038	305.0	0	N/A	N/A
structural_annotation	UHGV-0034002_14	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_15	phrog_477	46.3	0.00000000000059	head-tail adaptor Ad1	connector
UniRef90	UHGV-0034002_15	UniRef90_A0A8D9UHB0	223.0	0	Putative head tail connector protein	N/A
Pfam	UHGV-0034002_15	PF20557	N/A	N/A	Putative DnaT-like ssDNA binding protein	DnaT_2
structural_annotation	UHGV-0034002_15	PF20557	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034002_16	PF10665,TIGR01563	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034002_17	UniRef90_A0A8D9PDS5	142.0	4.08997e-41	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0034002_17	1031288.AXAA01000048_gene771	50.8	0.00000349	N/A	N/A
Pfam	UHGV-0034002_17	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0034002_17	PF11114,TIGR01725	N/A	N/A	N/A	N/A
Pfam	UHGV-0034002_18	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0034002_18	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_19	phrog_1407	55.1	0.0000000000000013	major tail protein	tail
UniRef90	UHGV-0034002_19	UniRef90_A0A8D9UH75	223.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-0034002_19	398512.JQKC01000005_gene5456	55.8	0.0000000549	N/A	N/A
Pfam	UHGV-0034002_19	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
structural_annotation	UHGV-0034002_19	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034002_20	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_22	phrog_1535	145.5	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0034002_22	1298920.KI911353_gene2649	195.0	0	tape measure	N/A
COG	UHGV-0034002_22	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0034002_22	PF21692,PF20155,TIGR01614,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_23	phrog_1194	67.1	2.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-0034002_23	1298920.KI911353_gene4840	68.6	0.00000000000055	N/A	N/A
structural_annotation	UHGV-0034002_23	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_24	phrog_13879	201.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0034002_24	1408415.JHXL01000001_gene402	109.0	1.68e-22	N/A	N/A
structural_annotation	UHGV-0034002_24	PF14594,PF00754,NF033848,COG3500,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_25	phrog_18725	91.3	1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0034002_25	693746.OBV_18220	109.0	3.33e-28	N/A	N/A
structural_annotation	UHGV-0034002_26	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
Pfam	UHGV-0034002_27	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-0034002_27	PF07484	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_29	phrog_13256	60.7	1.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0034002_29	1226322.HMPREF1545_00132	68.6	0.0000000000000207	N/A	N/A
KOfam	UHGV-0034002_30	K01447	95.0	1.2e-27	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0034002_30	phrog_670	119.9	2.9e-35	endolysin	lysis
UniRef90	UHGV-0034002_30	UniRef90_A0A3D4VSU2	152.0	9.93521e-43	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0034002_30	1203606.HMPREF1526_00589	88.6	1.26e-18	Ami_2	N/A
Pfam	UHGV-0034002_30	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0034002_30	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0034002_30	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_31	phrog_4105	78.4	8.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0034002_31	428125.CLOLEP_01431	59.7	0.000000000407	N/A	N/A
UniRef90	UHGV-0034002_33	UniRef90_A0A8D9PDZ2	92.0	5.61e-22	Insulin receptor	N/A
UniRef90	UHGV-0034002_34	UniRef90_A0A8D9PDT6	131.0	2.35e-38	Transcriptional regulatory protein	N/A
PHROG	UHGV-0034002_35	phrog_21718	41.0	0.000000000031	N/A	unknown function
UniRef90	UHGV-0034002_35	UniRef90_A0A8D9PDT7	147.0	2.38221e-44	Membrane fusogenic activity protein	N/A
eggNOG-mapper	UHGV-0034002_37	1408437.JNJN01000043_gene803	105.0	4.08e-25	N/A	N/A
PHROG	UHGV-0034002_38	phrog_20016	105.0	4.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0034002_38	397290.C810_05214	78.6	1.03e-16	N/A	N/A
structural_annotation	UHGV-0034002_38	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034002_40	UniRef90_A0A8D9PDZ3	174.0	0	Holliday junction resolvase	N/A
structural_annotation	UHGV-0034002_40	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
KOfam	UHGV-0034002_41	K14440	218.0	0	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0034002_41	phrog_62	297.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034002_41	UniRef90_A0A8D9PDR8	632.0	0	Chromatin remodeling complex ATPase	N/A
eggNOG-mapper	UHGV-0034002_41	1121333.JMLH01000042_gene2729	135.0	7.9e-31	SNF2 family N-terminal domain protein	N/A
PADLOC	UHGV-0034002_41	ZorD1_00007	125.9	3.7e-37	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0034002_41	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0034002_41	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0034002_41	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0034002_41	PF00176,PF00271,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
KOfam	UHGV-0034002_42	K02335	372.7	0	polA; DNA polymerase I [EC:2.7.7.7]	N/A
PHROG	UHGV-0034002_42	phrog_17	368.3	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034002_42	UniRef90_A0A7C6W992	948.0	0	DNA polymerase I	N/A
eggNOG-mapper	UHGV-0034002_42	935948.KE386495_gene2287	261.0	0	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	N/A
PADLOC	UHGV-0034002_42	drt-cluster58	91.4	1.5e-26	DRT	DRT
Pfam	UHGV-0034002_42	PF01612	N/A	N/A	3'-5' exonuclease	DNA_pol_A_exo1
Pfam	UHGV-0034002_42	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0034002_42	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0034002_42	PF00476,PF01612,MF_04101,NF004397,COG0749	N/A	N/A	N/A	N/A
KOfam	UHGV-0034002_43	K00601	49.4	0.000000000000047	E2.1.2.2; phosphoribosylglycinamide formyltransferase [EC:2.1.2.2]	N/A
UniRef90	UHGV-0034002_43	UniRef90_A0A2D6F1P4	98.6	1.52e-22	Formyl_trans_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0034002_43	525254.HMPREF0072_2054	63.9	0.000000000421	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	N/A
Pfam	UHGV-0034002_43	PF00551	N/A	N/A	Formyl transferase	Formyl_trans_N
COG	UHGV-0034002_43	COG0299	N/A	N/A	Folate-dependent phosphoribosylglycinamide formyltransferase PurN	N/A
structural_annotation	UHGV-0034002_43	PF00551,MF_01930,TIGR00655,COG0299	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_44	phrog_19058	147.5	8.54792e-44	N/A	unknown function
UniRef90	UHGV-0034002_44	UniRef90_A0A7T8IX45	246.0	0	DNA guanine transglycosylase	N/A
eggNOG-mapper	UHGV-0034002_44	996637.SGM_5178	63.9	0.00000000482	N/A	N/A
structural_annotation	UHGV-0034002_44	PF20314,MF_00168,TIGR00449,COG0343	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034002_45	UniRef90_A0A1C6DFA0	178.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0034002_45	742735.HMPREF9467_00909	83.2	3.26e-17	N/A	N/A
structural_annotation	UHGV-0034002_45	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_46	phrog_236	109.3	6.8e-32	nucleotide kinase	other
UniRef90	UHGV-0034002_46	UniRef90_A0A7C6S6P5	114.0	6.92e-32	N/A	N/A
eggNOG-mapper	UHGV-0034002_46	1265845.PWEIH_00490	87.4	3.51e-21	N/A	N/A
Pfam	UHGV-0034002_46	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0034002_46	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_47	phrog_229	64.6	2.2e-18	MazG-like pyrophosphatase	other
UniRef90	UHGV-0034002_47	UniRef90_A0A7C6S799	87.0	8.58e-20	Nucleoside triphosphate pyrophosphohydrolase family protein	N/A
eggNOG-mapper	UHGV-0034002_47	445335.CBN_1220	51.2	0.000000946	MazG nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-0034002_47	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0034002_47	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0034002_47	PF01503,MF_01020,TIGR03188,COG0140	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034002_48	UniRef90_A0A8D9UHA8	101.0	2.17e-26	AspA family protein	N/A
structural_annotation	UHGV-0034002_48	PF21100,MF_01911,NF040642,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-0034002_49	K02316	100.2	1.8e-29	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0034002_49	phrog_18685	124.0	7.1e-37	N/A	unknown function
UniRef90	UHGV-0034002_49	UniRef90_A0A8D9PDW5	1194.0	0	DNA directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0034002_49	360911.EAT1b_0006	145.0	9.22e-33	DNA primase activity	N/A
PADLOC	UHGV-0034002_49	drt-cluster192	49.1	1.6e-24	DRT	DRT
Pfam	UHGV-0034002_49	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-0034002_49	PF13662	N/A	N/A	Toprim domain	Toprim_4
Pfam	UHGV-0034002_49	PF00493	N/A	N/A	MCM P-loop domain	MCM
COG	UHGV-0034002_49	COG1241	N/A	N/A	DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family	N/A
structural_annotation	UHGV-0034002_49	PF00493,PF01807,PF13155,PF14947,MF_00974,MF_01314,NF040949,TIGR01391,COG1241	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_50	phrog_3724	49.8	0.000000000000056	N/A	unknown function
eggNOG-mapper	UHGV-0034002_50	1178540.BA70_16405	53.9	0.000000208	N/A	N/A
Pfam	UHGV-0034002_50	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0034002_50	PF05037,NF011800	N/A	N/A	N/A	N/A
KOfam	UHGV-0034002_51	K09125	136.3	2.1e-40	yhhQ; queuosine precursor transporter	N/A
PHROG	UHGV-0034002_51	phrog_4899	70.9	2.1e-20	N/A	unknown function
UniRef90	UHGV-0034002_51	UniRef90_UPI000F068A5D	253.0	0	queuosine precursor transporter	N/A
eggNOG-mapper	UHGV-0034002_51	1203606.HMPREF1526_02400	250.0	0	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage	N/A
Pfam	UHGV-0034002_51	PF02592	N/A	N/A	Putative vitamin uptake transporter	Vut_1
NCBIFam	UHGV-0034002_51	TIGR00697.1	N/A	N/A	queuosine precursor transporter	N/A
COG	UHGV-0034002_51	COG1738	N/A	N/A	N/A	N/A
HAMAP	UHGV-0034002_51	MF_02088	N/A	N/A	Probable queuosine precursor transporter	N/A
structural_annotation	UHGV-0034002_51	PF02592,MF_02088,TIGR00697,COG1738	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_52	phrog_124	113.4	2.3e-33	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034002_52	UniRef90_A0A8D9PDX3	440.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-0034002_52	1499967.BAYZ01000197_gene3023	60.8	0.0000000276	plasmid maintenance	N/A
Pfam	UHGV-0034002_52	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0034002_52	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0034002_52	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_53	phrog_3489	55.3	0.0000000000000011	N/A	unknown function
UniRef90	UHGV-0034002_53	UniRef90_A0A8D9PE01	170.0	0	DNA-binding domain protein	N/A
structural_annotation	UHGV-0034002_53	PF19157,NF002506	N/A	N/A	N/A	N/A
KOfam	UHGV-0034002_54	K07699	118.3	6.2e-35	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
PHROG	UHGV-0034002_54	phrog_37855	78.0	1e-22	N/A	unknown function
UniRef90	UHGV-0034002_54	UniRef90_A0A3B8JC42	88.6	1.51e-19	Stage 0 sporulation protein A homolog (Fragment)	N/A
eggNOG-mapper	UHGV-0034002_54	1121335.Clst_1048	86.3	7.86e-19	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process	N/A
Pfam	UHGV-0034002_54	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-0034002_54	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
structural_annotation	UHGV-0034002_54	PF08769,TIGR02875	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034002_55	PF12659	N/A	N/A	N/A	N/A
PHROG	UHGV-0034002_56	phrog_1218	65.4	6e-21	exonuclease	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0034002_56	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
COG	UHGV-0034002_56	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0034002_56	PF12705,TIGR00372,COG2887	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034002_59	UniRef90_A0A8D9PE04	189.0	0	Cyanate hydratase	N/A
PHROG	UHGV-0034002_60	phrog_6038	44.9	0.0000000000017	N/A	unknown function

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0034002	Yes	44,042	47	100	1
UHGV-0031379	No	44,042	47	100	1