vOTU vOTU-004372

vOTU: vOTU-004372

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-004372
Number of genomes	9
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00206 → vGENUS-00291 → vSUBGEN-20462 → vOTU-004372
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1353469
Biosample ID	SAMEA2737658
Genome length (bp)	42,414 bps
CheckV completeness	100.00% (Complete)
CDS count	70
CDS density	88.15%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia	Total connections	84	Host agreement	96.43
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp000434635	Total connections	12	Host agreement	91.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1353469_3	phrog_37916	47.3	0.00000000000029	N/A	unknown function
PHROG	UHGV-1353469_9	phrog_606	49.4	0.000000000000044	terminase small subunit	head and packaging
UniRef90	UHGV-1353469_9	UniRef90_UPI001D08D6B6	167.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1353469_9	1280663.ATVR01000009_gene2143	69.7	0.00000000000156	N/A	N/A
Pfam	UHGV-1353469_9	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1353469_9	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1353469_13	K06400	205.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1353469_13	phrog_95	203.2	0	integrase	integration and excision
UniRef90	UHGV-1353469_13	UniRef90_A0A3D4G6V8	263.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-1353469_13	697329.Rumal_3466	228.0	0	resolvase	N/A
Pfam	UHGV-1353469_13	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1353469_13	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1353469_13	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1353469_13	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-1353469_14	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
structural_annotation	UHGV-1353469_14	PF13240	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353469_16	PF09202,MF_01177,TIGR02702,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_17	phrog_1233	84.2	1.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-1353469_17	1232443.BAIA02000078_gene33	120.0	5.51e-34	N/A	N/A
PHROG	UHGV-1353469_18	phrog_38	187.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1353469_18	UniRef90_A0A810QA10	649.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1353469_18	1298920.KI911353_gene2682	474.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1353469_18	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1353469_18	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353469_18	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_19	phrog_64	200.0	0	portal protein	head and packaging
UniRef90	UHGV-1353469_19	UniRef90_UPI001C02F349	710.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1353469_19	1123263.AUKY01000015_gene1609	407.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1353469_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1353469_19	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_22	phrog_247	267.0	0	major head protein	head and packaging
UniRef90	UHGV-1353469_22	UniRef90_A0A3D0LY55	387.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-1353469_22	1304866.K413DRAFT_3038	305.0	0	N/A	N/A
Pfam	UHGV-1353469_22	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-1353469_22	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1353469_24	UniRef90_UPI00164E20D5	140.0	1.93996e-41	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1353469_24	1298920.KI911353_gene2658	54.3	0.0000000434	N/A	N/A
Pfam	UHGV-1353469_24	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1353469_24	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1353469_25	1121866.AUGK01000003_gene1432	74.7	0.00000000000000204	N/A	N/A
eggNOG-mapper	UHGV-1353469_26	1298920.KI911353_gene2654	74.3	0.000000000000024	N/A	N/A
structural_annotation	UHGV-1353469_27	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_28	phrog_158	52.4	0.000000000000011	major tail protein	tail
UniRef90	UHGV-1353469_28	UniRef90_A0A1C6L0H9	220.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1353469_28	1232453.BAIF02000058_gene1634	92.0	6.71e-22	N/A	N/A
structural_annotation	UHGV-1353469_28	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1353469_29	UniRef90_A0A847YX95	100.0	1.9e-25	N/A	N/A
eggNOG-mapper	UHGV-1353469_29	1123263.AUKY01000015_gene1618	77.8	3.92e-17	N/A	N/A
Pfam	UHGV-1353469_29	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1353469_29	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1353469_30	1211844.CBLM010000023_gene987	59.7	0.000000000527	N/A	N/A
PHROG	UHGV-1353469_31	phrog_1535	172.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1353469_31	1121866.AUGK01000003_gene1437	330.0	0	phage tail tape measure protein	N/A
COG	UHGV-1353469_31	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1353469_32	phrog_1194	80.0	2.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-1353469_32	702450.CUW_0546	53.5	0.000000204	N/A	N/A
structural_annotation	UHGV-1353469_32	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_33	phrog_6616	47.2	0.00000000000008	tail protein	tail
eggNOG-mapper	UHGV-1353469_33	1235797.C816_04180	107.0	1.99e-25	N/A	N/A
structural_annotation	UHGV-1353469_33	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-1353469_34	UniRef90_A0A856HZ25	127.0	5.39e-29	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1353469_34	1235797.C816_04179	97.4	3.07e-19	Chaperone of endosialidase	N/A
structural_annotation	UHGV-1353469_34	NF041249,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_37	phrog_38044	63.2	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-1353469_37	1123263.AUKY01000051_gene1069	62.8	0.0000000749	cellulase activity	N/A
COG	UHGV-1353469_37	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1353469_38	PF14686,PF07210,PF21582,TIGR03000,TIGR04183,COG2512	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1353469_41	994573.T472_0212005	54.3	0.000000785	N/A	N/A
KOfam	UHGV-1353469_42	K08640	95.5	9.2e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1353469_42	phrog_894	59.0	7.9e-17	endolysin	lysis
UniRef90	UHGV-1353469_42	UniRef90_R5EEL2	293.0	0	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-1353469_42	931626.Awo_c26840	112.0	2.55e-28	Peptidase M15	N/A
Pfam	UHGV-1353469_42	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-1353469_42	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1353469_42	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353469_42	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_43	phrog_4105	96.0	2.4e-28	N/A	unknown function
UniRef90	UHGV-1353469_43	UniRef90_A0A8D9UHA9	126.0	9.31e-36	Holin protein	N/A
eggNOG-mapper	UHGV-1353469_43	742733.HMPREF9469_05011	134.0	8.09e-40	N/A	N/A
PHROG	UHGV-1353469_44	phrog_10091	103.2	1.9e-30	holin	lysis
UniRef90	UHGV-1353469_44	UniRef90_D7GNX3	133.0	6.3e-39	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1353469_44	97139.C824_05950	119.0	4.13e-34	Bacteriophage holin	N/A
Pfam	UHGV-1353469_44	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1353469_44	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1353469_44	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353469_44	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353469_45	PF01047,NF001066,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1353469_49	K06400	383.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1353469_49	phrog_95	377.5	0	integrase	integration and excision
UniRef90	UHGV-1353469_49	UniRef90_UPI00164E9A6A	503.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1353469_49	718252.FP2_29980	355.0	0	N/A	N/A
Pfam	UHGV-1353469_49	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1353469_49	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1353469_49	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1353469_49	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1353469_49	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353469_50	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_51	phrog_8	46.4	0.0000000000009	transcriptional regulator	transcription regulation
UniRef90	UHGV-1353469_51	UniRef90_R5EEH6	80.5	2.5e-17	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-1353469_51	1297617.JPJD01000059_gene2644	63.9	0.000000000031	addiction module antidote protein HigA	N/A
Pfam	UHGV-1353469_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1353469_51	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1353469_51	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353469_53	PF08962,PF07653,COG2388	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_57	phrog_434	301.8	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353469_57	UniRef90_A0A354AUE1	278.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1353469_57	1121344.JHZO01000003_gene985	281.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1353469_57	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1353469_57	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1353469_57	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1353469_57	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353469_58	PF12844,MF_00535,NF041951,COG5499	N/A	N/A	N/A	N/A
KOfam	UHGV-1353469_59	K07455	298.3	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1353469_59	phrog_148	278.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353469_59	UniRef90_U2SBP2	371.0	0	Recombination and repair protein RecT	N/A
eggNOG-mapper	UHGV-1353469_59	1226322.HMPREF1545_00015	371.0	0	RecT family	N/A
Pfam	UHGV-1353469_59	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1353469_59	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1353469_59	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1353469_59	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1353469_60	K03111	132.5	4.9e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1353469_60	phrog_44	148.3	4.06377e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353469_60	UniRef90_A0A645AIU7	165.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1353469_60	693746.OBV_12860	163.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1353469_60	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1353469_60	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1353469_60	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1353469_60	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1353469_60	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1353469_61	K01160	60.3	5.1e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1353469_61	phrog_140	128.8	2.9e-38	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353469_61	UniRef90_A0A7G9WF80	134.0	1.31e-37	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1353469_61	1123263.AUKY01000072_gene2102	124.0	1.62e-34	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1353469_61	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1353469_61	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1353469_61	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_62	phrog_15768	138.9	2.09999e-41	N/A	unknown function
UniRef90	UHGV-1353469_62	UniRef90_A0A2V2F720	131.0	3.24e-34	N/A	N/A
eggNOG-mapper	UHGV-1353469_62	1123489.AUAN01000006_gene1691	90.1	3.76e-18	Protein conserved in bacteria	N/A
AcrCatalog	UHGV-1353469_62	cluster_38323	118.0	1.24e-34	NA	N/A
Pfam	UHGV-1353469_62	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1353469_62	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1353469_62	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_63	phrog_9804	152.1	2.8026e-45	N/A	unknown function
UniRef90	UHGV-1353469_63	UniRef90_A0A3D1LDS2	176.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1353469_63	1121344.JHZO01000003_gene981	165.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1353469_63	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1353469_63	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1353469_65	K00390	87.0	1.6e-25	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1353469_65	phrog_424	117.4	4.5e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1353469_65	UniRef90_A0A1Y4LU27	382.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-1353469_65	1408437.JNJN01000032_gene2312	350.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1353469_65	BrxP_00001	60.6	5.8e-18	BrxP	BREX
Pfam	UHGV-1353469_65	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1353469_65	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1353469_65	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1353469_66	476272.RUMHYD_03338	52.4	0.000000455	N/A	N/A
PHROG	UHGV-1353469_67	phrog_757	179.6	0	DNA methyltransferase	other
UniRef90	UHGV-1353469_67	UniRef90_A0A3A6EPW1	263.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1353469_67	748224.HMPREF9436_03069	244.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1353469_67	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1353469_67	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1353469_70	phrog_3136	117.5	6.4e-35	N/A	unknown function
UniRef90	UHGV-1353469_70	UniRef90_UPI001C02A61B	115.0	9.75e-29	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1353469_70	1235792.C808_00630	57.0	0.000000268	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-1353469_70	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1353469_70	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1353469	Yes	42,414	52	100	1
UHGV-2054772	No	42,414	52	100	1
UHGV-1377786	No	35,994	52	81	1
UHGV-1465372	No	23,974	51	54	1
UHGV-0078789	No	20,696	51	47	1
UHGV-1689793	No	18,792	52	42	1
UHGV-1652518	No	13,944	52	31	1
UHGV-0091357	No	13,420	50	30	1
UHGV-2163188	No	10,985	52	25	1