vOTU vOTU-004560

vOTU: vOTU-004560

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-004560
Number of genomes	4
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00044 → vSUBFAM-01046 → vGENUS-00965 → vSUBGEN-01142 → vOTU-004560
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1361320
Biosample ID	SAMEA3664586
Genome length (bp)	127,820 bps
CheckV completeness	100.00% (Complete)
CDS count	153
CDS density	84.01%
tRNA count	16
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	Total connections	4	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1361320_1	PF13973,NF038082,COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_4	MF_00085,NF008465	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_16	PF11314	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_18	PF02581,MF_02232,TIGR01182,COG0135	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_22	PF04492,TIGR01610	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_23	PF18903	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_25	phrog_559	80.9	1.6e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1361320_25	1527469.A0A076G7J2_9CAUD	80.1	0.0000000000000681	N/A	N/A
KOfam	UHGV-1361320_27	K06284	41.6	0.000000000019	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-1361320_27	phrog_4681	43.4	0.0000000000043	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-1361320_27	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-1361320_27	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-1361320_27	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
PHROG	UHGV-1361320_32	phrog_20187	172.1	0	N/A	unknown function
UniRef90	UHGV-1361320_32	UniRef90_A0A345BPQ2	107.0	1.17e-23	Putative Pol III-like exoribonuclease	N/A
structural_annotation	UHGV-1361320_32	PF03104,MF_00045,TIGR00573,COG1949	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_35	PF11019,MF_01022,NF003937,COG4502	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_39	K04769	95.9	6.8e-28	spoVT; AbrB family transcriptional regulator, stage V sporulation protein T	N/A
PHROG	UHGV-1361320_39	phrog_4681	74.1	1.3e-21	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1361320_39	UniRef90_A0A1T2X9R5	82.4	8.98e-19	AbrB family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1361320_39	1196322.A370_02381	81.3	5.23e-18	stage V sporulation protein T	N/A
Pfam	UHGV-1361320_39	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-1361320_39	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-1361320_39	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-1361320_39	PF04014,TIGR01439,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_48	phrog_5767	88.9	6.3e-28	sigma factor	transcription regulation
UniRef90	UHGV-1361320_48	UniRef90_A0A345BPU6	269.0	0	HTH DNA binding domain protein	N/A
PHROG	UHGV-1361320_49	phrog_3314	210.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1361320_49	1308863.U5J9N3_9CAUD	87.0	2.28e-16	N/A	N/A
PHROG	UHGV-1361320_50	phrog_15503	194.9	0	N/A	unknown function
UniRef90	UHGV-1361320_50	UniRef90_A0A0H3V0N0	464.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-1361320_50	1560313.A0A0D3MT14_9CAUD	244.0	0	N/A	N/A
structural_annotation	UHGV-1361320_50	PF20441,PF04466,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_51	phrog_9084	97.6	1.5e-28	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_51	UniRef90_UPI0015967D86	68.2	0.00000000000184	N/A	N/A
eggNOG-mapper	UHGV-1361320_51	397291.C804_06294	98.6	7.91e-23	transposase activity	N/A
COG	UHGV-1361320_51	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1361320_51	PF18741,MF_04160,NF007294,COG2852	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_52	phrog_2739	262.9	0	portal protein	head and packaging
UniRef90	UHGV-1361320_52	UniRef90_A0A345BPV2	436.0	0	Putative portal protein	N/A
eggNOG-mapper	UHGV-1361320_52	665956.HMPREF1032_03237	119.0	4.48e-26	N/A	N/A
structural_annotation	UHGV-1361320_52	PF05133,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_53	phrog_3313	118.6	1e-36	N/A	unknown function
UniRef90	UHGV-1361320_53	UniRef90_A0A843FJ52	150.0	1.46e-37	HALZ domain-containing protein	N/A
eggNOG-mapper	UHGV-1361320_53	1308863.U5J9D4_9CAUD	109.0	6.77e-23	N/A	N/A
structural_annotation	UHGV-1361320_53	PF04586,TIGR01543,COG3566	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_54	phrog_35301	47.6	0.000000000000024	N/A	unknown function
PHROG	UHGV-1361320_55	phrog_4088	232.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1361320_55	1541960.KQ78_01850	219.0	0	N/A	N/A
structural_annotation	UHGV-1361320_55	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_57	phrog_3853	75.5	5.8e-22	N/A	unknown function
PHROG	UHGV-1361320_58	phrog_29637	56.2	6e-16	N/A	unknown function
PHROG	UHGV-1361320_59	phrog_31155	44.9	0.0000000000016	N/A	unknown function
structural_annotation	UHGV-1361320_59	PF19408,PF11649,NF041894,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_60	phrog_6123	64.8	1.3e-18	virion structural protein	head and packaging
structural_annotation	UHGV-1361320_60	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_61	phrog_4051	103.8	1.7e-30	N/A	unknown function
PHROG	UHGV-1361320_63	phrog_59	118.0	5.7e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_63	UniRef90_A0A385IKL0	119.0	3.07e-30	Homing endonuclease	N/A
eggNOG-mapper	UHGV-1361320_63	1123239.KB898628_gene3227	95.9	9.96e-22	NUMOD4 motif	N/A
PADLOC	UHGV-1361320_63	HEase_00016	54.3	0.0000000000000046	homing endonuclease	RM
Pfam	UHGV-1361320_63	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1361320_63	PF13392,PF13518	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_64	phrog_2729	126.5	2e-38	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1361320_64	1163671.JAGI01000002_gene1222	76.6	0.000000000000132	N/A	N/A
KOfam	UHGV-1361320_67	K20478	128.8	2.4e-40	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-1361320_67	phrog_4211	165.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1361320_67	UniRef90_A0A843GPK6	325.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1361320_67	1541960.KQ78_01861	173.0	1.54e-40	nuclear chromosome segregation	N/A
Pfam	UHGV-1361320_67	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1361320_67	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1361320_67	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1361320_68	PF02010,MF_00075,MF_04116,NF040788	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1361320_69	1280681.AUJZ01000004_gene2923	66.6	0.0000000179	Leucine rich repeats (6 copies)	N/A
COG	UHGV-1361320_69	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_69	NF033189	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_70	PF19077,PF19266,PF13157,PF00041,MF_04116,MF_01591,NF041335,COG3499,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_71	phrog_32343	90.1	4.2039e-45	N/A	unknown function
UniRef90	UHGV-1361320_71	UniRef90_A0A345BPW9	370.0	0	Putative flagellin-like protein	N/A
eggNOG-mapper	UHGV-1361320_71	1235800.C819_00529	65.9	0.0000000261	N/A	N/A
structural_annotation	UHGV-1361320_71	PF06605,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1361320_73	1519439.JPJG01000060_gene1892	60.8	0.00000105	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1361320_73	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-1361320_75	phrog_13892	65.1	4.7e-19	minor tail protein	tail
eggNOG-mapper	UHGV-1361320_75	1122917.KB899686_gene3294	84.7	0.00000000000000476	Phage tail-collar fibre protein	N/A
COG	UHGV-1361320_75	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1361320_76	phrog_37900	60.7	1.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1361320_76	1519439.JPJG01000060_gene1894	103.0	1.39e-23	N/A	N/A
Pfam	UHGV-1361320_76	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1361320_76	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
PHROG	UHGV-1361320_78	phrog_37900	119.6	1.3e-35	N/A	unknown function
UniRef90	UHGV-1361320_78	UniRef90_A0A3D1L9V5	98.6	1.32e-22	N/A	N/A
eggNOG-mapper	UHGV-1361320_78	552398.HMPREF0866_03098	115.0	1.25e-27	N/A	N/A
Pfam	UHGV-1361320_78	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1361320_78	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1361320_78	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_79	phrog_10993	252.7	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-1361320_79	UniRef90_A0A350TI55	322.0	0	N/A	N/A
eggNOG-mapper	UHGV-1361320_79	1121334.KB911071_gene1970	233.0	0	N/A	N/A
Pfam	UHGV-1361320_79	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1361320_79	PF19789	N/A	N/A	N/A	N/A
Pfam	UHGV-1361320_81	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1361320_81	PF09682,TIGR01673	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1361320_83	476272.RUMHYD_01953	74.7	9.95e-17	N/A	N/A
PHROG	UHGV-1361320_84	phrog_16490	82.1	6.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1361320_84	1408437.JNJN01000043_gene803	92.4	1.6e-19	N/A	N/A
PHROG	UHGV-1361320_85	phrog_20016	180.6	0	N/A	unknown function
UniRef90	UHGV-1361320_85	UniRef90_A0A345BPX4	167.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-1361320_85	1226322.HMPREF1545_00077	167.0	0	N/A	N/A
structural_annotation	UHGV-1361320_85	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1361320_86	658655.HMPREF0988_00915	75.1	0.0000000000000433	N/A	N/A
PHROG	UHGV-1361320_87	phrog_1233	56.1	6.6e-16	N/A	unknown function
UniRef90	UHGV-1361320_87	UniRef90_A0A345BPX6	140.0	2.98995e-41	Metal-dependent hydrolase	N/A
eggNOG-mapper	UHGV-1361320_87	658655.HMPREF0988_00914	83.6	1.77e-19	N/A	N/A
KOfam	UHGV-1361320_89	K01520	137.6	9.70007e-41	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1361320_89	phrog_135	151.7	2.8026e-45	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_89	UniRef90_A0A8D9UHK3	151.0	2.66247e-44	dUTPase	N/A
eggNOG-mapper	UHGV-1361320_89	622312.ROSEINA2194_00085	139.0	1.10001e-40	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-1361320_89	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1361320_89	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1361320_89	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1361320_89	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_91	PF14639,MF_00651,NF001026,COG0816	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_94	K00525	451.6	0	E1.17.4.1A, nrdA, nrdE; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]	N/A
PHROG	UHGV-1361320_94	phrog_84	278.5	0	ribonucleoside-diphosphate reductase large subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_94	UniRef90_UPI00085BFD37	702.0	0	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	N/A
eggNOG-mapper	UHGV-1361320_94	537013.CLOSTMETH_03946	686.0	0	Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen	N/A
Pfam	UHGV-1361320_94	PF02867	N/A	N/A	Ribonucleotide reductase, barrel domain	Ribonuc_red_lgC
COG	UHGV-1361320_94	COG0209	N/A	N/A	Ribonucleotide reductase alpha subunit	N/A
structural_annotation	UHGV-1361320_94	PF02867,MF_04026,NF006417,COG0209	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_95	K00942	91.9	9.2e-27	gmk, GUK1; guanylate kinase [EC:2.7.4.8]	N/A
PHROG	UHGV-1361320_95	phrog_1815	105.2	8.2e-31	guanylate kinase	other
UniRef90	UHGV-1361320_95	UniRef90_A0A401UTJ7	105.0	2.49e-25	Guanylate kinase	N/A
eggNOG-mapper	UHGV-1361320_95	742733.HMPREF9469_00862	85.9	2.02e-18	Guanylate kinase homologues.	N/A
Pfam	UHGV-1361320_95	PF00625	N/A	N/A	Guanylate kinase	Guanylate_kin
COG	UHGV-1361320_95	COG0194	N/A	N/A	Guanylate kinase	N/A
structural_annotation	UHGV-1361320_95	PF00625,MF_00328,TIGR03263,COG0194	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_96	K02337	628.8	0	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	N/A
PHROG	UHGV-1361320_96	phrog_405	706.4	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_96	UniRef90_A0A858MXR6	1016.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1361320_96	742735.HMPREF9467_00895	1016.0	0	DNA polymerase III alpha subunit	N/A
Pfam	UHGV-1361320_96	PF02811	N/A	N/A	PHP domain	PHP
Pfam	UHGV-1361320_96	PF07733	N/A	N/A	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
Pfam	UHGV-1361320_96	PF17657	N/A	N/A	Bacterial DNA polymerase III alpha subunit finger domain	DNA_pol3_finger
Pfam	UHGV-1361320_96	PF14579	N/A	N/A	Helix-hairpin-helix motif	HHH_6
COG	UHGV-1361320_96	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
structural_annotation	UHGV-1361320_96	PF07733,PF02811,PF17657,PF14579,MF_01902,NF005617,COG0587	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_97	K03581	95.2	1.8e-28	recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]	N/A
PHROG	UHGV-1361320_97	phrog_325	176.0	0	Dda-like helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_97	UniRef90_A0A843GQ82	272.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1361320_97	1088721.NSU_0291	148.0	5.77e-39	UvrD-like helicase C-terminal domain	N/A
Pfam	UHGV-1361320_97	PF13604	N/A	N/A	AAA domain	AAA_30
Pfam	UHGV-1361320_97	PF13538	N/A	N/A	UvrD-like helicase C-terminal domain	UvrD_C_2
COG	UHGV-1361320_97	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1361320_97	MF_03176,TIGR01447	N/A	N/A	N/A	N/A
UniRef90	UHGV-1361320_99	UniRef90_A0A843FTG5	154.0	2.86986e-42	Phage_lysozyme2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1361320_99	562983.HMPREF0433_01500	54.3	0.00000275	domain protein	N/A
Pfam	UHGV-1361320_99	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-1361320_99	COG3583	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_99	PF18013,PF02185,NF001260	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_100	K07462	287.1	0	recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-1361320_100	phrog_2484	421.3	0	RecJ-like ssDNA exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_100	UniRef90_A0A843FU26	553.0	0	DHH family phosphoesterase	N/A
eggNOG-mapper	UHGV-1361320_100	665956.HMPREF1032_03163	320.0	0	exonuclease	N/A
Pfam	UHGV-1361320_100	PF01368	N/A	N/A	DHH family	DHH
Pfam	UHGV-1361320_100	PF17768	N/A	N/A	RecJ OB domain	RecJ_OB
COG	UHGV-1361320_100	COG0608	N/A	N/A	ssDNA-specific exonuclease RecJ, DHH superfamily, may be involved in archaeal DNA replication intiation	N/A
structural_annotation	UHGV-1361320_100	PF17768,PF02272,MF_00207,TIGR00644,COG0608	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_101	K02316	51.5	0.000000000000007	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1361320_101	phrog_47	108.0	1.2e-31	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_101	UniRef90_A0A345BPU0	300.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1361320_101	1280.SAXN108_2224	202.0	0	DNA primase activity	N/A
COG	UHGV-1361320_101	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1361320_101	PF01807,PF19898,MF_00974,NF006382,COG0358	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_103	K02314	100.3	2.1e-29	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1361320_103	phrog_19	155.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_103	UniRef90_A0A843FVR3	632.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1361320_103	224308.BSU20370	367.0	0	DnaB-like helicase C terminal domain	N/A
Pfam	UHGV-1361320_103	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1361320_103	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1361320_103	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1361320_103	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
COG	UHGV-1361320_104	COG2887	N/A	N/A	RecB family exonuclease	N/A
PHROG	UHGV-1361320_105	phrog_4645	115.7	3.2e-34	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_105	UniRef90_A0A1S6KUY9	86.7	4.66e-17	LAGLIDADG_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1361320_105	760568.Desku_1120	69.7	0.0000000000242	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1361320_105	PF14528	N/A	N/A	LAGLIDADG-like domain	LAGLIDADG_3
COG	UHGV-1361320_105	COG1372	N/A	N/A	Intein/homing endonuclease	N/A
structural_annotation	UHGV-1361320_105	PF00961,MF_01420,TIGR00647,COG1372	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_106	phrog_124	138.9	3.59994e-41	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_106	UniRef90_A0A843GMB3	179.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1361320_106	1500386.A0A060AL14_9CAUD	106.0	5.31e-25	AAA domain	N/A
Pfam	UHGV-1361320_106	PF13479	N/A	N/A	AAA domain	AAA_24
PHROG	UHGV-1361320_107	phrog_2367	54.9	0.0000000000000014	N/A	unknown function
structural_annotation	UHGV-1361320_107	PF00436,PF19649,MF_00984,NF004476,COG2965	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_108	K03465	123.0	2.6e-36	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-1361320_108	phrog_85	64.5	1.6e-18	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_108	UniRef90_R7N7F7	271.0	0	Predicted alternative thymidylate synthase	N/A
eggNOG-mapper	UHGV-1361320_108	1282887.AUJG01000001_gene1906	250.0	0	thymidylate synthase (FAD) activity	N/A
Pfam	UHGV-1361320_108	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
COG	UHGV-1361320_108	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
structural_annotation	UHGV-1361320_108	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_109	phrog_314	89.5	6.2e-26	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_109	UniRef90_A0A345BPZ2	138.0	3.51e-35	GIY-YIG domain-containing protein	N/A
eggNOG-mapper	UHGV-1361320_109	1354303.M917_2314	54.3	0.00000998	N/A	N/A
PADLOC	UHGV-1361320_109	HEase_00030	46.3	0.00000000000095	homing endonuclease	RM
Pfam	UHGV-1361320_109	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
NCBIFam	UHGV-1361320_109	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
COG	UHGV-1361320_109	COG3860	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_109	PF19835,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_110	phrog_559	132.7	3.9e-39	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_110	UniRef90_A0A6G5YLM0	106.0	1.69e-23	N/A	N/A
eggNOG-mapper	UHGV-1361320_110	1129192.A0A0E3D988_9CAUD	89.4	7.77e-18	regulation of transcription, DNA-dependent	N/A
structural_annotation	UHGV-1361320_110	PF18741,PF14311,MF_04160,NF007294,COG3727	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_111	PF04182,MF_01909,NF040939,COG1675	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_113	K18951	87.1	3.7e-26	gp30; DNA ligase [EC:6.5.1.1]	N/A
PHROG	UHGV-1361320_113	phrog_114	132.5	3.4e-39	ATP-dependent DNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_113	UniRef90_A0A345BPZ1	306.0	0	DNA ligase	N/A
eggNOG-mapper	UHGV-1361320_113	1121121.KB894295_gene4492	180.0	0	dna ligase	N/A
Pfam	UHGV-1361320_113	PF01068	N/A	N/A	ATP dependent DNA ligase domain	DNA_ligase_A_M
COG	UHGV-1361320_113	COG1793	N/A	N/A	ATP-dependent DNA ligase	N/A
structural_annotation	UHGV-1361320_113	PF01068,MF_00407,TIGR02779,COG1793	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_114	K02469	625.0	0	gyrA; DNA gyrase subunit A [EC:5.6.2.2]	N/A
PHROG	UHGV-1361320_114	phrog_551	328.2	0	DNA topoisomerase II	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_114	UniRef90_A0A7T9H628	414.0	0	DNA gyrase subunit A	N/A
eggNOG-mapper	UHGV-1361320_114	1541960.KQ78_01979	410.0	0	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	N/A
Pfam	UHGV-1361320_114	PF00521	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	DNA_topoisoIV
Pfam	UHGV-1361320_114	PF03989	N/A	N/A	DNA gyrase C-terminal domain, beta-propeller	DNA_gyraseA_C
COG	UHGV-1361320_114	COG0188	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	N/A
structural_annotation	UHGV-1361320_114	PF00521,PF03989,MF_01897,NF004043,COG0188	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_115	K02470	504.1	0	gyrB; DNA gyrase subunit B [EC:5.6.2.2]	N/A
PHROG	UHGV-1361320_115	phrog_543	437.4	0	DNA topoisomerase II large subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_115	UniRef90_A0A3B9Z7X0	600.0	0	DNA topoisomerase (ATP-hydrolyzing)	N/A
eggNOG-mapper	UHGV-1361320_115	484019.THA_911	355.0	0	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	N/A
Pfam	UHGV-1361320_115	PF02518	N/A	N/A	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	HATPase_c
Pfam	UHGV-1361320_115	PF00204	N/A	N/A	DNA gyrase B	DNA_gyraseB
Pfam	UHGV-1361320_115	PF01751	N/A	N/A	Toprim domain	Toprim
COG	UHGV-1361320_115	COG0187	N/A	N/A	DNA gyrase/topoisomerase IV, subunit B	N/A
structural_annotation	UHGV-1361320_115	PF00204,MF_01898,TIGR01059,COG0187	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_116	K03469	129.6	3e-38	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1361320_116	phrog_531	133.7	9.5e-40	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_116	UniRef90_A0A843FJ64	125.0	1.75e-33	Ribonuclease H	N/A
eggNOG-mapper	UHGV-1361320_116	754027.HMPREF9554_01059	94.0	2.97e-22	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-1361320_116	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1361320_116	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1361320_116	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_118	K21470	44.1	0.0000000000023	ycbB; L,D-transpeptidase YcbB	N/A
PHROG	UHGV-1361320_118	phrog_9589	68.5	1.7e-25	endolysin	lysis
eggNOG-mapper	UHGV-1361320_118	1298920.KI911353_gene4832	123.0	5.81e-29	Peptidoglycan-binding domain 1 protein	N/A
Pfam	UHGV-1361320_118	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-1361320_118	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1361320_118	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
KOfam	UHGV-1361320_119	K07175	156.6	0	phoH2; PhoH-like ATPase	N/A
PHROG	UHGV-1361320_119	phrog_2765	206.4	0	PhoH-like phosphate starvation-inducible	other
UniRef90	UHGV-1361320_119	UniRef90_A0A1C5UCD2	428.0	0	PhoH-like protein	N/A
eggNOG-mapper	UHGV-1361320_119	1123252.ATZF01000010_gene420	270.0	0	PIN domain	N/A
Pfam	UHGV-1361320_119	PF02562	N/A	N/A	PhoH-like protein	PhoH
COG	UHGV-1361320_119	COG1875	N/A	N/A	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	N/A
structural_annotation	UHGV-1361320_119	PF02562,PF13638,PF09142,MF_00265,NF007827,NF009148,COG1875	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_122	phrog_547	120.0	1.4e-35	phosphoesterase	other
UniRef90	UHGV-1361320_122	UniRef90_A0A1I0M725	190.0	0	Calcineurin-like phosphoesterase superfamily protein	N/A
eggNOG-mapper	UHGV-1361320_122	864702.OsccyDRAFT_0605	90.5	9.3e-20	nucleotidyltransferase activity	N/A
Pfam	UHGV-1361320_122	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1361320_122	COG4186	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_122	PF12850,MF_00575,NF006988,COG4186	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_123	K08073	50.9	0.000000000000015	PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]	N/A
PHROG	UHGV-1361320_123	phrog_6931	83.3	2.8e-24	N/A	unknown function
UniRef90	UHGV-1361320_123	UniRef90_A0A345BPY6	93.6	7.02e-21	AAA domain protein	N/A
eggNOG-mapper	UHGV-1361320_123	1220589.CD32_13550	63.5	0.00000000138	Chromatin associated protein KTI12	N/A
Pfam	UHGV-1361320_123	PF08433	N/A	N/A	Chromatin associated protein KTI12	KTI12
COG	UHGV-1361320_123	COG2844	N/A	N/A	UTP:GlnB (protein PII) uridylyltransferase	N/A
structural_annotation	UHGV-1361320_123	PF13671,MF_00065,TIGR03574,COG4088	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_124	phrog_1257	45.9	0.00000000000099	ribosome associated inhibitor A; zinc finger domain	moron, auxiliary metabolic gene and host takeover
structural_annotation	UHGV-1361320_127	PF01978,MF_01177,NF008240,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_130	K14680	129.4	2.3e-38	E6.5.1.3; RNA ligase [EC:6.5.1.3]	N/A
PHROG	UHGV-1361320_130	phrog_562	172.8	0	RNA ligase and tail fiber protein attachment catalyst	tail
UniRef90	UHGV-1361320_130	UniRef90_D8FWV8	197.0	0	Putative RNA ligase (ATP)	N/A
eggNOG-mapper	UHGV-1361320_130	402777.KB235903_gene825	197.0	0	RNA ligase	N/A
Pfam	UHGV-1361320_130	PF09511	N/A	N/A	RNA ligase	RNA_lig_T4_1
structural_annotation	UHGV-1361320_130	PF09511,MF_04149,TIGR02308,COG5324	N/A	N/A	N/A	N/A
UniRef90	UHGV-1361320_131	UniRef90_A0A843FNF2	188.0	0	Metallophosphoesterase	N/A
eggNOG-mapper	UHGV-1361320_131	1410624.JNKK01000001_gene660	90.1	3.4e-20	N/A	N/A
KOfam	UHGV-1361320_132	K00600	564.4	0	glyA, SHMT; glycine hydroxymethyltransferase [EC:2.1.2.1]	N/A
PHROG	UHGV-1361320_132	phrog_9968	480.8	0	methyltransferase	other
UniRef90	UHGV-1361320_132	UniRef90_A0A354UC54	472.0	0	Serine hydroxymethyltransferase	N/A
eggNOG-mapper	UHGV-1361320_132	1161902.HMPREF0378_0632	431.0	0	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	N/A
Pfam	UHGV-1361320_132	PF00464	N/A	N/A	Serine hydroxymethyltransferase	SHMT
NCBIFam	UHGV-1361320_132	NF000586.1	N/A	N/A	serine hydroxymethyltransferase	N/A
COG	UHGV-1361320_132	COG0112	N/A	N/A	Glycine/serine hydroxymethyltransferase	N/A
HAMAP	UHGV-1361320_132	MF_00051	N/A	N/A	Serine hydroxymethyltransferase [glyA]	N/A
structural_annotation	UHGV-1361320_132	PF00464,MF_00051,NF000586,COG0112	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_137	phrog_2470	43.2	0.0000000000049	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1361320_137	UniRef90_UPI0019D2D8CA	129.0	2.61e-36	N/A	N/A
eggNOG-mapper	UHGV-1361320_137	742735.HMPREF9467_00878	124.0	3.29e-35	N/A	N/A
KOfam	UHGV-1361320_143	K07313	116.8	1.7e-34	pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16]	N/A
PHROG	UHGV-1361320_143	phrog_246	105.0	5.7e-31	NinI-like serine-threonine phosphatase	other
UniRef90	UHGV-1361320_143	UniRef90_R6LQ90	199.0	0	Metallophos domain-containing protein	N/A
eggNOG-mapper	UHGV-1361320_143	500633.CLOHIR_00780	179.0	0	phosphoprotein phosphatase activity	N/A
Pfam	UHGV-1361320_143	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1361320_143	COG0639	N/A	N/A	Diadenosine tetraphosphatase ApaH/serine/threonine protein phosphatase, PP2A family	N/A
structural_annotation	UHGV-1361320_143	PF12850,MF_01443,NF007425,COG0622	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1361320_145	PF01978,MF_01819,NF012168,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-1361320_146	K21038	152.9	1.4013e-45	brt; reverse transcriptase [EC:2.7.7.49]	N/A
PHROG	UHGV-1361320_146	phrog_1423	247.6	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1361320_146	UniRef90_R6GED1	262.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-1361320_146	1123376.AUIU01000012_gene1573	187.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-1361320_146	icity0040	116.0	5.4e-34	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-1361320_146	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-1361320_146	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-1361320_146	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-1361320_147	phrog_3206	56.9	2.2e-16	Avd protein of DGR	DNA, RNA and nucleotide metabolism
Pfam	UHGV-1361320_148	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1361320_148	PF19789	N/A	N/A	N/A	N/A
UniRef90	UHGV-1361320_151	UniRef90_A0A843GFP1	68.9	0.000000000039	Mtd_N domain-containing protein	N/A
PHROG	UHGV-1361320_152	phrog_23595	50.4	0.000000000000016	minor tail protein	tail
UniRef90	UHGV-1361320_152	UniRef90_A0A316L6V9	457.0	0	Mtd_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1361320_152	428125.CLOLEP_00308	99.8	5.23e-20	LPXTG-motif cell wall anchor domain protein	N/A
Pfam	UHGV-1361320_152	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
structural_annotation	UHGV-1361320_152	PF18454,PF14262	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1361320	Yes	127,820	40	100	1
UHGV-1361319	No	127,480	40	100	1
UHGV-1413522	No	132,385	40	100	1
UHGV-1612725	No	40,594	42	32	1