vOTU vOTU-004726

vOTU: vOTU-004726

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-004726
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-00520 → vGENUS-02993 → vSUBGEN-36460 → vOTU-004726
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103 → CAG-103 sp900543625
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0019803
Biosample ID	SAMEA4765940
Genome length (bp)	38,961 bps
CheckV completeness	100.00% (Complete)
CDS count	48
CDS density	90.11%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103 → CAG-103 sp900543625	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Limivicinus → Limivicinus sp900546515	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0019803_1	K03651	61.7	1.3e-17	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
PHROG	UHGV-0019803_1	phrog_7158	117.4	1.1e-34	N/A	unknown function
UniRef90	UHGV-0019803_1	UniRef90_A0A810PV47	163.0	1.55e-38	Metallophos domain-containing protein	N/A
eggNOG-mapper	UHGV-0019803_1	1519439.JPJG01000060_gene1892	60.1	0.00000218	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0019803_1	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-0019803_1	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0019803_1	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0019803_2	PF21253,PF07210,NF038128,TIGR03000,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0019803_3	phrog_20388	89.8	3e-26	endolysin	lysis
UniRef90	UHGV-0019803_3	UniRef90_UPI00189D4A1D	100.0	8.75e-22	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0019803_3	1203606.HMPREF1526_00253	102.0	5.66e-22	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0019803_3	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0019803_3	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0019803_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0019803_3	PF18013,PF01471,COG3409	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019803_4	693746.OBV_01600	57.0	0.00000459	N/A	N/A
eggNOG-mapper	UHGV-0019803_5	1408437.JNJN01000039_gene389	120.0	7.24e-24	heme binding	N/A
Pfam	UHGV-0019803_5	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
COG	UHGV-0019803_5	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
PHROG	UHGV-0019803_6	phrog_1281	155.6	0	N/A	unknown function
UniRef90	UHGV-0019803_6	UniRef90_A8RCY4	185.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019803_6	428127.EUBDOL_01537	185.0	0	N/A	N/A
Pfam	UHGV-0019803_6	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0019803_6	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019803_6	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-0019803_7	phrog_5931	146.7	1.4013e-43	N/A	unknown function
eggNOG-mapper	UHGV-0019803_7	35760.BCHO_0887	112.0	1.35e-26	N/A	N/A
PHROG	UHGV-0019803_8	phrog_374	72.8	6.3e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019803_8	UniRef90_M4W6M2	67.4	0.000000000000463	Transcription factor	N/A
eggNOG-mapper	UHGV-0019803_8	387344.LVIS_0713	76.3	1.9e-16	N/A	N/A
PHROG	UHGV-0019803_9	phrog_1770	101.6	7.8e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019803_9	UniRef90_A0A1L8CM45	102.0	3.61e-25	Crossover junction endodeoxyribonuclease RuvC	N/A
eggNOG-mapper	UHGV-0019803_9	994601.G9BW80_9CAUD	95.5	5.26e-23	nucleic acid binding	N/A
structural_annotation	UHGV-0019803_9	PF16921,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
KOfam	UHGV-0019803_14	K01520	140.9	9.30042e-42	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0019803_14	phrog_135	129.4	1.9e-38	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019803_14	UniRef90_R5YVN2	178.0	0	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-0019803_14	887929.HMP0721_1278	149.0	1.4013e-44	dUTPase	N/A
Pfam	UHGV-0019803_14	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0019803_14	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0019803_14	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0019803_14	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0019803_15	phrog_9804	125.6	3.3e-37	N/A	unknown function
UniRef90	UHGV-0019803_15	UniRef90_A0A1C5T9U7	139.0	8.78e-39	Loader and inhibitor of phage G40P	N/A
eggNOG-mapper	UHGV-0019803_15	585394.RHOM_14005	107.0	9.47e-27	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-0019803_15	cluster_137185	92.8	4.95e-26	NA	N/A
Pfam	UHGV-0019803_15	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0019803_15	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0019803_17	phrog_561	156.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019803_17	UniRef90_A0A174RC35	213.0	0	RecT family	N/A
eggNOG-mapper	UHGV-0019803_17	1129145.H2BD49_9CAUD	169.0	0	DNA metabolic process	N/A
Pfam	UHGV-0019803_17	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-0019803_17	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0019803_19	phrog_298	67.2	1e-19	exonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0019803_19	1218075.BAYA01000003_gene606	86.3	3.36e-18	N/A	N/A
structural_annotation	UHGV-0019803_19	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019803_22	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0019803_23	UniRef90_A0A1Y4LQU9	56.6	0.00000000398	HTH cro/C1-type domain-containing protein	N/A
UniRef90	UHGV-0019803_25	UniRef90_UPI001D05D211	58.9	0.00000000468	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0019803_25	1507.HMPREF0262_00424	56.6	0.00000000647	Cro/C1-type HTH DNA-binding domain	N/A
COG	UHGV-0019803_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0019803_25	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0019803_27	K14059	104.9	1.2e-30	int; integrase	N/A
PHROG	UHGV-0019803_27	phrog_1	129.6	2.7e-38	integrase	integration and excision
UniRef90	UHGV-0019803_27	UniRef90_A0A3D2G173	333.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0019803_27	246199.CUS_5913	134.0	1.72e-33	Phage integrase family	N/A
Pfam	UHGV-0019803_27	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0019803_27	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0019803_27	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0019803_28	UniRef90_UPI001EF5C620	141.0	2.26e-37	class II glutamine amidotransferase	N/A
eggNOG-mapper	UHGV-0019803_28	1401067.HMPREF0872_03875	107.0	1.15e-24	N/A	N/A
structural_annotation	UHGV-0019803_28	PF13230,MF_01931,TIGR01134,COG0121	N/A	N/A	N/A	N/A
PHROG	UHGV-0019803_29	phrog_16683	186.1	0	N/A	unknown function
UniRef90	UHGV-0019803_29	UniRef90_A0A3C0QQ13	221.0	0	Zinc-binding protein	N/A
eggNOG-mapper	UHGV-0019803_29	1341157.RF007C_13540	194.0	0	N/A	N/A
Pfam	UHGV-0019803_29	PF12224	N/A	N/A	Putative amidoligase enzyme	Amidoligase_2
structural_annotation	UHGV-0019803_29	PF12224,PF18129,MF_01609,MF_00613,MF_00773,NF010042,NF002745,COG2139,COG2170	N/A	N/A	N/A	N/A
KOfam	UHGV-0019803_33	K03111	128.7	6.7e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0019803_33	phrog_44	130.8	9.5e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019803_33	UniRef90_A0A6I2RBS1	143.0	1.09e-40	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0019803_33	742738.HMPREF9460_03732	145.0	2.25049e-42	Single-strand binding protein family	N/A
Pfam	UHGV-0019803_33	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0019803_33	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0019803_33	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0019803_33	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0019803_33	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0019803_38	K06909	110.7	1.6e-32	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0019803_38	phrog_979	138.4	7.90332e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0019803_38	UniRef90_A0A1M5YHQ5	491.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0019803_38	693746.OBV_01690	445.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0019803_38	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0019803_38	COG1783	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-0019803_40	phrog_156	116.8	6.4e-36	portal protein	head and packaging
eggNOG-mapper	UHGV-0019803_40	693746.OBV_01670	509.0	0	N/A	N/A
structural_annotation	UHGV-0019803_40	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0019803_42	phrog_422	115.8	3.7e-34	major head protein	head and packaging
UniRef90	UHGV-0019803_42	UniRef90_A0A8J6JH37	289.0	0	Chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0019803_42	1430331.EP10_10365	147.0	3.12e-39	N/A	N/A
Pfam	UHGV-0019803_42	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0019803_42	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0019803_43	phrog_1863	66.7	2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0019803_43	748224.HMPREF9436_01412	95.5	4.51e-25	N/A	N/A
PHROG	UHGV-0019803_44	phrog_1129	68.3	7.9e-20	holin	lysis
UniRef90	UHGV-0019803_44	UniRef90_A0A0D8J2M2	115.0	9.77e-32	Enolase	N/A
eggNOG-mapper	UHGV-0019803_44	665956.HMPREF1032_03272	114.0	4.56e-32	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0019803_44	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0019803_44	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019803_45	1519439.JPJG01000011_gene57	130.0	1.37e-36	N/A	N/A
structural_annotation	UHGV-0019803_45	PF11650	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019803_46	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0019803_47	phrog_5107	40.4	0.000000000022	amidase	lysis
UniRef90	UHGV-0019803_47	UniRef90_A0A4D7ASB8	508.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019803_47	1519439.JPJG01000011_gene54	508.0	0	N/A	N/A
structural_annotation	UHGV-0019803_47	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-0019803_48	phrog_892	53.2	3.4e-26	tail fiber protein	tail

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0019803	Yes	38,961	53	100	1
UHGV-0015390	No	38,961	53	100	1
UHGV-0015928	No	31,430	52	78	1