vOTU vOTU-004765

vOTU: vOTU-004765

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-004765
Number of genomes	12
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00102 → vSUBFAM-01063 → vGENUS-17771 → vSUBGEN-33248 → vOTU-004765
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900753285
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0021566
Biosample ID	SAMEA4766007
Genome length (bp)	57,755 bps
CheckV completeness	100.00% (Complete)
CDS count	76
CDS density	91.54%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900753285	Total connections	5	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0021566_2	596152.DesU5LDRAFT_1910	94.4	3.29e-21	N/A	N/A
structural_annotation	UHGV-0021566_2	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021566_3	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_5	phrog_757	191.7	0	DNA methyltransferase	other
UniRef90	UHGV-0021566_5	UniRef90_A0A417JTT5	242.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0021566_5	1095750.HMPREF9970_0173	216.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0021566_5	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0021566_5	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0021566_6	K01520	144.5	7.59504e-43	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0021566_6	phrog_135	125.9	2.3e-37	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021566_6	UniRef90_UPI001873736C	160.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0021566_6	1282887.AUJG01000016_gene1113	147.0	8.04345e-43	N/A	N/A
Pfam	UHGV-0021566_6	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0021566_6	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0021566_6	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0021566_6	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_7	phrog_9300	47.5	0.00000000000017	N/A	unknown function
UniRef90	UHGV-0021566_7	UniRef90_F2F2I1	80.5	0.00000000000000806	Predicted ATPase	N/A
structural_annotation	UHGV-0021566_8	PF06289,COG1582	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_15	phrog_4632	47.1	0.0000000000000052	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021566_15	UniRef90_A0A1V5ZUM0	96.3	7.58e-23	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0021566_15	556263.FSEG_00477	60.8	0.000000000429	N/A	N/A
structural_annotation	UHGV-0021566_15	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_16	phrog_474	90.3	3.9e-26	phosphofructokinase	other
UniRef90	UHGV-0021566_16	UniRef90_UPI001D0B8E43	73.6	0.000000000000012	N/A	N/A
eggNOG-mapper	UHGV-0021566_16	1111121.HMPREF1247_0807	66.6	0.000000000000581	N/A	N/A
Pfam	UHGV-0021566_16	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0021566_16	PF19905	N/A	N/A	N/A	N/A
KOfam	UHGV-0021566_19	K03111	72.8	8e-21	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0021566_19	phrog_44	81.5	1.6e-23	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021566_19	UniRef90_A0A7C6GL00	103.0	3e-26	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0021566_19	203119.Cthe_1350	77.0	9.31e-17	Single-strand binding protein family	N/A
Pfam	UHGV-0021566_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0021566_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0021566_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0021566_19	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_21	phrog_22978	404.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0021566_21	1321782.HMPREF1986_00356	248.0	0	N/A	N/A
Pfam	UHGV-0021566_21	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
Pfam	UHGV-0021566_21	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
Pfam	UHGV-0021566_21	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
KOfam	UHGV-0021566_22	K14059	162.5	0	int; integrase	N/A
PHROG	UHGV-0021566_22	phrog_1	150.0	1.96182e-44	integrase	integration and excision
UniRef90	UHGV-0021566_22	UniRef90_A0A353J242	181.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0021566_22	887325.HMPREF0381_0346	155.0	1.30993e-41	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0021566_22	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0021566_22	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0021566_22	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021566_23	UniRef90_A0A7M1RS47	68.9	0.00000000000781	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0021566_23	1408437.JNJN01000043_gene801	99.0	1.09e-23	N/A	N/A
structural_annotation	UHGV-0021566_25	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021566_28	1122921.KB898212_gene2740	55.1	0.0000000189	N/A	N/A
KOfam	UHGV-0021566_30	K01447	107.6	1e-31	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0021566_30	phrog_3088	229.2	0	amidase	lysis
UniRef90	UHGV-0021566_30	UniRef90_A0A143ZT95	211.0	0	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
eggNOG-mapper	UHGV-0021566_30	428125.CLOLEP_01782	202.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0021566_30	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0021566_30	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0021566_30	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0021566_30	PF09992,PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_31	phrog_4105	72.6	9.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0021566_31	397288.C806_00056	92.0	1.47e-22	N/A	N/A
eggNOG-mapper	UHGV-0021566_33	158787.BSCA_1013	57.0	0.00000044	N/A	N/A
eggNOG-mapper	UHGV-0021566_34	1118057.CAGX01000020_gene1595	57.4	0.00000149	cell wall binding repeat	N/A
COG	UHGV-0021566_34	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
eggNOG-mapper	UHGV-0021566_35	411471.SUBVAR_06929	61.6	0.00000000208	ATPase involved in DNA repair	N/A
COG	UHGV-0021566_35	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0021566_36	phrog_13589	45.6	1.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-0021566_36	411471.SUBVAR_06929	278.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0021566_36	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0021566_38	phrog_19111	125.4	3.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-0021566_38	1499967.BAYZ01000016_gene6532	65.1	0.0000000128	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0021566_38	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
eggNOG-mapper	UHGV-0021566_39	763034.HMPREF9446_00480	60.5	0.00000102	N/A	N/A
structural_annotation	UHGV-0021566_39	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021566_42	1449126.JQKL01000002_gene1688	95.9	2.09e-18	N/A	N/A
structural_annotation	UHGV-0021566_42	PF11134,MF_00923,NF010237,NF038128,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021566_43	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_45	phrog_14242	108.8	3.6e-32	major head protein	head and packaging
UniRef90	UHGV-0021566_45	UniRef90_A0A355JD53	280.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0021566_45	588581.Cpap_1528	139.0	1.12e-34	N/A	N/A
NCBIFam	UHGV-0021566_45	NF033394.1	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0021566_45	PF17236,MF_04133,NF033394,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_47	phrog_156	115.3	1.9e-34	portal protein	head and packaging
eggNOG-mapper	UHGV-0021566_47	588581.Cpap_1526	241.0	0	N/A	N/A
structural_annotation	UHGV-0021566_47	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0021566_50	K06909	291.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0021566_50	phrog_3717	200.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0021566_50	UniRef90_A0A3S1ABC6	476.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0021566_50	696281.Desru_1088	449.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0021566_50	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0021566_50	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0021566_50	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0021566_50	PF04466,PF20454,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_51	phrog_606	48.0	0.00000000000019	terminase small subunit	head and packaging
structural_annotation	UHGV-0021566_51	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_52	phrog_13890	58.6	8.1e-17	N/A	unknown function
UniRef90	UHGV-0021566_52	UniRef90_R7BAB6	59.7	0.000000000188	Arc-like DNA-binding protein	N/A
eggNOG-mapper	UHGV-0021566_52	1501230.ET33_16755	53.5	0.0000000101	N/A	N/A
structural_annotation	UHGV-0021566_52	PF10723,NF010256,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_55	phrog_16123	77.1	2.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0021566_55	1273103.NM10_00919	77.0	0.00000000000000113	N/A	N/A
PHROG	UHGV-0021566_57	phrog_6160	149.7	1.26117e-44	N/A	unknown function
eggNOG-mapper	UHGV-0021566_57	670487.Ocepr_2257	111.0	3.79e-25	N/A	N/A
Pfam	UHGV-0021566_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0021566_58	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0021566_58	PF01381,NF040507,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_62	phrog_8	46.4	0.00000000000083	transcriptional regulator	transcription regulation
UniRef90	UHGV-0021566_62	UniRef90_A0A1M5ZHU2	63.9	0.0000000000669	Repressor LexA	N/A
eggNOG-mapper	UHGV-0021566_62	865861.AZSU01000002_gene2597	49.7	0.00000186	Transcriptional	N/A
Pfam	UHGV-0021566_62	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0021566_62	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0021566_62	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_63	phrog_8	54.7	0.0000000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0021566_63	UniRef90_A0A7U9T6J8	91.3	2.61e-22	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0021566_63	97138.C820_00783	82.0	2.13e-19	Helix-turn-helix domain	N/A
Pfam	UHGV-0021566_63	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
KOfam	UHGV-0021566_65	K07741	135.5	8.20001e-40	antB; anti-repressor protein	N/A
PHROG	UHGV-0021566_65	phrog_63	107.2	2.2e-31	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0021566_65	UniRef90_UPI00085CC716	206.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0021566_65	1230342.CTM_17202	185.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0021566_65	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0021566_65	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0021566_65	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0021566_65	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-0021566_69	K10906	86.0	8.7e-31	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-0021566_69	phrog_412	219.2	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021566_69	UniRef90_A0A1C6GFL6	224.0	0	Exodeoxyribonuclease 8	N/A
eggNOG-mapper	UHGV-0021566_69	553220.CAMGR0001_2139	145.0	3.37e-39	N/A	N/A
Pfam	UHGV-0021566_69	PF12684	N/A	N/A	N/A	DUF3799
structural_annotation	UHGV-0021566_69	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0021566_70	phrog_3657	355.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0021566_70	470.IX87_10630	248.0	0	N/A	N/A
PHROG	UHGV-0021566_71	phrog_3490	128.0	6.2e-38	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021566_71	UniRef90_A0A1C6FNL5	132.0	7.77e-37	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021566_71	411460.RUMTOR_02068	112.0	1.37e-29	N/A	N/A
Pfam	UHGV-0021566_71	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0021566_71	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
Pfam	UHGV-0021566_72	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0021566_73	phrog_270	93.3	3.7e-27	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0021566_73	945021.TEH_18370	92.4	9.44e-20	Helix-turn-helix domain	N/A
COG	UHGV-0021566_73	COG0640	N/A	N/A	DNA-binding transcriptional regulator, ArsR family	N/A
KOfam	UHGV-0021566_74	K02315	164.0	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0021566_74	phrog_50	157.8	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021566_74	UniRef90_R6WX70	201.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0021566_74	203119.Cthe_2467	199.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0021566_74	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-0021566_74	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0021566_74	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0021566_74	PF01695,MF_01158,NF005992,COG1484	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0021566	Yes	57,755	49	100	1
UHGV-0025422	No	57,784	49	100	1
UHGV-0015174	No	58,339	49	100	1
UHGV-0019336	No	37,226	50	64	1
UHGV-0136800	No	34,553	50	59	1
UHGV-1462215	No	34,553	50	59	1
UHGV-1388653	No	31,450	50	54	1
UHGV-1474271	No	30,509	50	52	1
UHGV-1346218	No	22,644	50	39	1
UHGV-1332535	No	17,933	49	33	1
UHGV-0195506	No	16,739	51	29	1
UHGV-1665676	No	11,256	46	19	1