vOTU vOTU-004812

vOTU: vOTU-004812

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-004812
Number of genomes	5
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00150 → vSUBFAM-00515 → vGENUS-03138 → vSUBGEN-21590 → vOTU-004812
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Ventricola → Ventricola sp900542445
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0020315
Biosample ID	SAMEA4765639
Genome length (bp)	44,537 bps
CheckV completeness	100.00% (Complete)
CDS count	68
CDS density	90.73%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Ventricola → Ventricola sp900542445	Total connections	22	Host agreement	77.27
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0020315_1	COG0406	N/A	N/A	Broad specificity phosphatase PhoE	N/A
structural_annotation	UHGV-0020315_2	PF16640,NF032891	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020315_3	PF21722	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020315_5	268407.PWYN_12490	192.0	1.4013e-45	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	N/A
Pfam	UHGV-0020315_5	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0020315_5	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
PHROG	UHGV-0020315_8	phrog_511	56.2	3.8e-16	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0020315_8	1449126.JQKL01000046_gene2081	62.8	0.00000021	N/A	N/A
COG	UHGV-0020315_8	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0020315_8	PF11134,MF_03022,NF010237,TIGR04362,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020315_9	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0020315_11	phrog_1357	220.5	0	major head protein	head and packaging
UniRef90	UHGV-0020315_11	UniRef90_A0A2S0L5P8	256.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0020315_11	696281.Desru_1092	242.0	0	N/A	N/A
Pfam	UHGV-0020315_11	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0020315_11	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0020315_11	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0020315_13	phrog_156	219.1	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0020315_13	748224.HMPREF9436_01396	169.0	2.78018e-42	N/A	N/A
structural_annotation	UHGV-0020315_13	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0020315_14	K06909	114.9	8.7e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0020315_14	phrog_979	157.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0020315_14	UniRef90_UPI0004130EC4	479.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0020315_14	1121091.AUMP01000003_gene2581	479.0	0	Terminase-like family	N/A
Pfam	UHGV-0020315_14	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0020315_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0020315_14	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0020315_15	phrog_2538	40.9	0.000000000026	terminase small subunit	head and packaging
Pfam	UHGV-0020315_15	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0020315_15	PF02796,TIGR02844	N/A	N/A	N/A	N/A
PHROG	UHGV-0020315_17	phrog_15863	146.0	1.49939e-43	N/A	unknown function
UniRef90	UHGV-0020315_17	UniRef90_A0A1U7M9V5	136.0	6.7e-38	Chaperone protein DnaJ	N/A
eggNOG-mapper	UHGV-0020315_17	693746.OBV_01780	124.0	9.09e-34	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0020315_17	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
PHROG	UHGV-0020315_21	phrog_374	75.8	1.5e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020315_21	UniRef90_UPI0015B5305E	92.0	7.33e-20	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0020315_21	478749.BRYFOR_05054	91.3	1.03e-19	AP2 domain protein	N/A
Pfam	UHGV-0020315_21	PF00847	N/A	N/A	AP2 domain	AP2
structural_annotation	UHGV-0020315_21	PF00847	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020315_22	PF07374,TIGR01636	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020315_23	UniRef90_A0A832L5E4	92.8	1.52e-20	Crossover junction endodeoxyribonuclease RuvC	N/A
eggNOG-mapper	UHGV-0020315_23	1304885.AUEY01000070_gene1852	97.4	4.62e-23	N/A	N/A
structural_annotation	UHGV-0020315_23	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0020315_25	phrog_11947	45.9	0.00000000000094	N/A	unknown function
eggNOG-mapper	UHGV-0020315_25	272134.KB731324_gene2120	50.4	0.00000225	N/A	N/A
PHROG	UHGV-0020315_26	phrog_9300	48.1	0.000000000000068	N/A	unknown function
UniRef90	UHGV-0020315_26	UniRef90_F2F2I1	61.2	0.0000000689	Predicted ATPase	N/A
KOfam	UHGV-0020315_29	K03111	159.4	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0020315_29	phrog_44	155.2	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020315_29	UniRef90_A0A1Q6Q4S4	183.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0020315_29	1042163.BRLA_c031440	143.0	7.13962e-42	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0020315_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0020315_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0020315_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0020315_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0020315_29	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0020315_30	K07729	43.4	0.0000000000067	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0020315_30	UniRef90_A0A385PZG0	65.1	0.0000000000014	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0020315_30	476272.RUMHYD_03617	61.2	0.0000000000116	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0020315_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020315_30	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0020315_30	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0020315_32	K07741	102.0	1.3e-29	antB; anti-repressor protein	N/A
PHROG	UHGV-0020315_32	phrog_130	233.5	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0020315_32	UniRef90_A0A417H802	246.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0020315_32	553184.ATORI0001_1204	208.0	0	Antirepressor	N/A
Pfam	UHGV-0020315_32	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0020315_32	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0020315_32	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0020315_32	PF02498,PF03374,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0020315_33	phrog_9804	148.3	4.06377e-44	N/A	unknown function
UniRef90	UHGV-0020315_33	UniRef90_UPI0015C5D332	160.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0020315_33	903814.ELI_3550	145.0	5.27e-41	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0020315_33	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0020315_33	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0020315_34	phrog_15768	60.7	3.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0020315_34	1121344.JHZO01000003_gene982	60.8	0.0000000254	N/A	N/A
Pfam	UHGV-0020315_34	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0020315_34	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0020315_35	phrog_659	164.8	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020315_35	UniRef90_UPI001E5A6693	185.0	0	N/A	N/A
eggNOG-mapper	UHGV-0020315_35	1507.HMPREF0262_00431	155.0	4.2039e-45	N/A	N/A
Pfam	UHGV-0020315_35	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0020315_35	PF06378,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020315_38	PF20800	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020315_40	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020315_46	UniRef90_N2AZL4	51.2	0.00000133	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0020315_46	861454.HMPREF9099_00333	51.2	0.00000024	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0020315_46	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0020315_46	PF08667,MF_00535,NF010465,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0020315_48	K22300	60.3	4.5e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0020315_48	phrog_8	42.2	0.0000000000086	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020315_48	UniRef90_UPI001C031B33	87.0	9.72e-20	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0020315_48	97138.C820_01960	80.9	4.95e-18	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0020315_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020315_48	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0020315_48	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0020315_51	K14059	196.9	0	int; integrase	N/A
PHROG	UHGV-0020315_51	phrog_1	177.0	0	integrase	integration and excision
UniRef90	UHGV-0020315_51	UniRef90_UPI0019610FE2	176.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0020315_51	1226322.HMPREF1545_00144	140.0	3.87e-36	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0020315_51	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-0020315_51	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0020315_51	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0020315_51	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020315_52	PF02255,TIGR00823	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020315_54	UniRef90_A0A1Y3RJS2	100.0	8.79e-23	Sigma70_r4_2 domain-containing protein	N/A
KOfam	UHGV-0020315_55	K07741	47.2	0.0000000000007	antB; anti-repressor protein	N/A
PHROG	UHGV-0020315_55	phrog_130	133.4	1.8e-39	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0020315_55	UniRef90_B0PAR2	343.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0020315_55	445972.ANACOL_01862	343.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0020315_55	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0020315_55	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0020315_55	PF03374,PF02498,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020315_58	UniRef90_A0A8D9UIC9	57.4	0.00000000106	Alginate and motility regulator	N/A
eggNOG-mapper	UHGV-0020315_58	663952.SDD27957_09060	50.4	0.0000000984	N/A	N/A
Pfam	UHGV-0020315_58	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0020315_58	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020315_59	PF08281,TIGR02983	N/A	N/A	N/A	N/A
PHROG	UHGV-0020315_60	phrog_199	88.6	6.2e-26	holin	lysis
UniRef90	UHGV-0020315_60	UniRef90_UPI001C00C30F	134.0	2.41e-37	phage holin family protein	N/A
eggNOG-mapper	UHGV-0020315_60	411467.BACCAP_00280	124.0	2.32e-34	Bacteriophage holin family	N/A
Pfam	UHGV-0020315_60	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0020315_60	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0020315_60	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0020315_60	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0020315_61	phrog_329	41.2	0.000000000013	minor tail protein	tail
UniRef90	UHGV-0020315_61	UniRef90_A0A2V2FP98	199.0	0	SH3b domain-containing protein	N/A
Pfam	UHGV-0020315_61	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0020315_61	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020315_61	PF08239,PF00877,NF008096,COG4991,COG0791	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020315_63	UniRef90_UPI0013EDE85A	56.6	0.00000000135	XkdX family protein	N/A
eggNOG-mapper	UHGV-0020315_63	718252.FP2_16990	47.8	0.000000777	Phage uncharacterised protein (Phage_XkdX)	N/A
structural_annotation	UHGV-0020315_63	PF09693	N/A	N/A	N/A	N/A
KOfam	UHGV-0020315_65	K24214	63.7	1.7e-18	OTOL1; otolin-1	N/A
PHROG	UHGV-0020315_65	phrog_5073	83.7	1.8e-24	tail fiber protein	tail
Pfam	UHGV-0020315_65	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0020315_66	phrog_28526	109.8	8.7e-33	N/A	unknown function
UniRef90	UHGV-0020315_66	UniRef90_A0A415D4T1	84.7	9.49e-21	N/A	N/A
eggNOG-mapper	UHGV-0020315_66	411462.DORLON_00769	82.8	9.23e-21	N/A	N/A
PHROG	UHGV-0020315_67	phrog_24451	79.2	4.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0020315_67	931276.Cspa_c07590	75.5	5.21e-16	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0020315	Yes	44,537	56	100	1
UHGV-0040084	No	44,537	56	100	1
UHGV-0014783	No	38,598	57	90	1
UHGV-0014676	No	35,510	56	82	1
UHGV-0018734	No	26,717	56	62	1