vOTU vOTU-005083

vOTU: vOTU-005083

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-005083
Number of genomes	9
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00177 → vSUBGEN-42664 → vOTU-005083
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1366705
Biosample ID	SAMEA2157850
Genome length (bp)	40,785 bps
CheckV completeness	100.00% (Complete)
CDS count	76
CDS density	93.25%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	623	Host agreement	91.33
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	9	Host agreement	77.78

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1366705_1	1226322.HMPREF1545_00079	110.0	6.91e-30	N/A	N/A
structural_annotation	UHGV-1366705_2	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_3	phrog_20016	196.8	0	N/A	unknown function
UniRef90	UHGV-1366705_3	UniRef90_A0A285PT46	192.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1366705_3	1226322.HMPREF1545_00077	174.0	0	N/A	N/A
structural_annotation	UHGV-1366705_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_4	phrog_16490	123.4	3e-37	N/A	unknown function
eggNOG-mapper	UHGV-1366705_4	1408437.JNJN01000043_gene803	96.7	2.4e-21	N/A	N/A
PHROG	UHGV-1366705_5	phrog_22984	72.8	7.8e-22	N/A	unknown function
PHROG	UHGV-1366705_6	phrog_21718	92.9	2.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-1366705_6	397290.C810_05210	57.8	0.0000000324	N/A	N/A
PHROG	UHGV-1366705_7	phrog_3754	91.8	7.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-1366705_7	476272.RUMHYD_01764	162.0	0	N/A	N/A
eggNOG-mapper	UHGV-1366705_8	1160721.RBI_I00206	56.2	0.00000000057	N/A	N/A
structural_annotation	UHGV-1366705_8	PF10723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1366705_10	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_11	phrog_14030	146.1	2.20004e-43	N/A	unknown function
UniRef90	UHGV-1366705_11	UniRef90_R6LL81	245.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1366705_11	1121866.AUGK01000003_gene1444	92.8	6.95e-19	amidase activity	N/A
COG	UHGV-1366705_11	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-1366705_12	phrog_6918	95.6	3.3e-28	holin	lysis
UniRef90	UHGV-1366705_12	UniRef90_A0A316QCY7	103.0	1.73e-26	Holin	N/A
eggNOG-mapper	UHGV-1366705_12	1297617.JPJD01000020_gene301	101.0	1.21e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1366705_12	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1366705_12	PF09682,TIGR01673	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1366705_14	1232443.BAIA02000106_gene3111	50.4	0.00000262	N/A	N/A
Pfam	UHGV-1366705_15	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1366705_15	PF07484	N/A	N/A	N/A	N/A
Pfam	UHGV-1366705_16	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1366705_16	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_17	phrog_18725	93.1	2.9e-27	N/A	unknown function
eggNOG-mapper	UHGV-1366705_17	693746.OBV_18220	128.0	1.44e-35	N/A	N/A
PHROG	UHGV-1366705_18	phrog_13879	192.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1366705_18	1122919.KB905559_gene1344	162.0	4.10006e-41	N/A	N/A
structural_annotation	UHGV-1366705_18	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1366705_19	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_20	phrog_6900	273.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1366705_20	1123312.KB904569_gene357	327.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-1366705_20	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1366705_20	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_22	phrog_18646	50.4	0.000000000000041	N/A	unknown function
PHROG	UHGV-1366705_23	phrog_885	74.1	1.7e-21	major tail protein	tail
UniRef90	UHGV-1366705_23	UniRef90_A0A843J9F0	206.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1366705_23	1504822.CCNO01000012_gene492	246.0	0	N/A	N/A
structural_annotation	UHGV-1366705_23	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1366705_24	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_25	phrog_17977	79.1	4.1e-23	N/A	unknown function
UniRef90	UHGV-1366705_25	UniRef90_UPI00141211AB	114.0	9.97e-31	head-tail adaptor protein	N/A
structural_annotation	UHGV-1366705_25	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_27	phrog_544	132.9	3e-39	major head protein	head and packaging
UniRef90	UHGV-1366705_27	UniRef90_A0A1C6B5R0	595.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1366705_27	1232453.BAIF02000011_gene3359	363.0	0	N/A	N/A
Pfam	UHGV-1366705_27	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1366705_27	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_28	phrog_194	41.9	0.000000000018	head scaffolding protein	head and packaging
UniRef90	UHGV-1366705_28	UniRef90_A0A6B9SU02	153.0	1.73761e-43	Fibronectin autolysin	N/A
eggNOG-mapper	UHGV-1366705_28	476272.RUMHYD_01775	59.7	0.0000000251	COG NOG36366 non supervised orthologous group	N/A
structural_annotation	UHGV-1366705_28	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_29	phrog_5	82.4	8e-24	tail completion or Neck1 protein	connector
UniRef90	UHGV-1366705_29	UniRef90_A0A7X5E1T2	183.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1366705_29	764299.STRIC_1434	92.4	3e-22	N/A	N/A
Pfam	UHGV-1366705_29	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1366705_29	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1366705_29	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_30	phrog_595	122.3	5.5e-36	head maturation protease	head and packaging
UniRef90	UHGV-1366705_30	UniRef90_A0A810PSD3	442.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1366705_30	1504822.CCNO01000013_gene286	216.0	0	cell adhesion	N/A
Pfam	UHGV-1366705_30	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1366705_30	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1366705_30	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1366705_30	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1366705_32	575590.HMPREF0156_00583	67.0	0.000000000983	Leucine rich repeats (6 copies)	N/A
Pfam	UHGV-1366705_32	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-1366705_32	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1366705_32	PF13306	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1366705_33	411471.SUBVAR_06929	311.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1366705_33	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-1366705_35	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_36	phrog_64	158.1	0	portal protein	head and packaging
UniRef90	UHGV-1366705_36	UniRef90_UPI001AA0B7FF	494.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1366705_36	673376.F2VHW1_9CAUD	221.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1366705_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1366705_36	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1366705_37	K06909	132.9	3.2e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1366705_37	phrog_10250	161.4	0	N/A	unknown function
UniRef90	UHGV-1366705_37	UniRef90_UPI0018A99FCF	621.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1366705_37	476272.RUMHYD_01756	449.0	0	N/A	N/A
Pfam	UHGV-1366705_37	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1366705_37	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1366705_37	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1366705_37	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1366705_37	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1366705_38	K07474	103.9	3.1e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1366705_38	phrog_51	113.2	2e-33	terminase small subunit	head and packaging
UniRef90	UHGV-1366705_38	UniRef90_A0A396NMY4	131.0	9.86e-37	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1366705_38	476272.RUMHYD_01754	125.0	2.14e-35	Terminase small subunit	N/A
Pfam	UHGV-1366705_38	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1366705_38	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1366705_38	PF03592,COG3728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1366705_39	PF10922,MF_00839	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1366705_40	742738.HMPREF9460_02503	92.4	3.39e-23	N/A	N/A
structural_annotation	UHGV-1366705_40	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_43	phrog_1770	57.5	2.8e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1366705_43	536233.CLO_1822	150.0	5.32493e-44	N/A	N/A
structural_annotation	UHGV-1366705_43	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
Pfam	UHGV-1366705_45	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-1366705_45	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_50	phrog_38832	64.3	2.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-1366705_50	445972.ANACOL_00165	62.0	0.00000000237	N/A	N/A
structural_annotation	UHGV-1366705_50	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_51	phrog_3136	137.6	3.59994e-41	N/A	unknown function
UniRef90	UHGV-1366705_51	UniRef90_UPI001C02A61B	152.0	4.38606e-43	ASCH domain-containing protein	N/A
COG	UHGV-1366705_51	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1366705_51	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_52	phrog_954	199.7	0	DNA methyltransferase	other
UniRef90	UHGV-1366705_52	UniRef90_A0A810Q0N4	292.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1366705_52	1280698.AUJS01000007_gene1028	273.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-1366705_52	MTase_II_00074	195.9	0	Type II methyltransferase	RM
Pfam	UHGV-1366705_52	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1366705_52	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-1366705_52	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
Pfam	UHGV-1366705_53	PF04448	N/A	N/A	N/A	DUF551
Pfam	UHGV-1366705_54	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1366705_54	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_57	phrog_16304	55.6	0.0000000000000011	N/A	unknown function
UniRef90	UHGV-1366705_57	UniRef90_A0A3D3Y5P0	227.0	0	N/A	N/A
eggNOG-mapper	UHGV-1366705_57	1410650.JHWL01000003_gene2848	55.1	0.00000416	N/A	N/A
Pfam	UHGV-1366705_57	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1366705_57	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1366705_58	K03111	145.4	6.19374e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1366705_58	phrog_44	145.2	3.79752e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1366705_58	UniRef90_R6LVK0	199.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1366705_58	1007096.BAGW01000023_gene151	186.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1366705_58	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1366705_58	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1366705_58	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1366705_58	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1366705_58	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_59	phrog_155	152.5	2.8026e-45	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1366705_59	UniRef90_UPI00130EB09C	198.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1366705_59	748224.HMPREF9436_03360	180.0	0	ERF superfamily	N/A
Pfam	UHGV-1366705_59	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1366705_59	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1366705_61	phrog_4433	176.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1366705_61	106648.BBLJ01000054_gene3814	100.0	2.26e-24	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1366705_61	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1366705_61	NF007410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1366705_64	NF041247	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1366705_65	760568.Desku_0919	114.0	4.94e-29	N/A	N/A
structural_annotation	UHGV-1366705_65	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1366705_66	1235835.C814_03153	74.7	5.02e-17	N/A	N/A
structural_annotation	UHGV-1366705_66	PF09035,NF040990	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1366705_67	240292.Ava_C0229	47.0	0.00000494	Helix-turn-helix domain	N/A
Pfam	UHGV-1366705_67	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1366705_67	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1366705_67	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1366705_68	1216932.CM240_0696	73.2	0.000000000000608	N/A	N/A
structural_annotation	UHGV-1366705_68	PF03965,MF_01819,NF012168,COG3682	N/A	N/A	N/A	N/A
UniRef90	UHGV-1366705_69	UniRef90_A0A3D3Y0G5	139.0	6.15e-40	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-1366705_69	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1366705_70	476272.RUMHYD_03309	62.4	0.0000000000377	N/A	N/A
structural_annotation	UHGV-1366705_70	PF13601,MF_01819,NF008565,COG1846	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1366705_73	1280682.AUKA01000018_gene2337	142.0	6.25e-38	N/A	N/A
Pfam	UHGV-1366705_73	PF12773	N/A	N/A	Double zinc ribbon	DZR
structural_annotation	UHGV-1366705_73	PF02805	N/A	N/A	N/A	N/A
Pfam	UHGV-1366705_75	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1366705_75	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1366705_75	PF12844	N/A	N/A	N/A	N/A
KOfam	UHGV-1366705_76	K14059	132.4	5.8e-39	int; integrase	N/A
PHROG	UHGV-1366705_76	phrog_1	144.2	1.10002e-42	integrase	integration and excision
UniRef90	UHGV-1366705_76	UniRef90_UPI00195CC1EE	380.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1366705_76	1235835.C814_03141	194.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1366705_76	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1366705_76	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1366705_76	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1366705	Yes	40,785	53	100	1
UHGV-0055966	No	40,785	53	100	1
UHGV-1895718	No	40,749	54	100	1
UHGV-1440849	No	32,262	54	79	1
UHGV-1479176	No	31,793	54	77	1
UHGV-2052724	No	14,485	54	35	1
UHGV-1774213	No	13,916	54	34	1
UHGV-1730941	No	13,280	54	32	1
UHGV-0200108	No	12,251	53	30	1