vOTU vOTU-005294

vOTU: vOTU-005294

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-005294
Number of genomes	27
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00027 → vSUBFAM-00190 → vGENUS-02270 → vSUBGEN-01425 → vOTU-005294
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Oliverpabstia
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1903376
Biosample ID	N/A
Genome length (bp)	51,154 bps
CheckV completeness	100.00% (Complete)
CDS count	77
CDS density	92.34%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Oliverpabstia	Total connections	200	Host agreement	70.5
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1903376_5	K06909	310.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1903376_5	phrog_3717	122.2	5.60519e-43	terminase large subunit	head and packaging
UniRef90	UHGV-1903376_5	UniRef90_A0A349YI29	509.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1903376_5	1443122.Z958_p0035	449.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1903376_5	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1903376_5	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1903376_5	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1903376_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1903376_5	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_7	phrog_24267	58.9	3.9e-18	N/A	unknown function
UniRef90	UHGV-1903376_7	UniRef90_A0A099I3H7	113.0	8.28e-27	Pilus assembly protein (Fragment)	N/A
eggNOG-mapper	UHGV-1903376_7	411490.ANACAC_00723	113.0	6.16e-28	the current gene model (or a revised gene model) may contain a frame shift	N/A
COG	UHGV-1903376_7	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1903376_8	PF19714	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1903376_9	1232452.BAIB02000007_gene1610	108.0	2.61e-23	N/A	N/A
structural_annotation	UHGV-1903376_9	PF10651,PF20328	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_12	phrog_443	57.0	5.4e-16	holin	lysis
UniRef90	UHGV-1903376_12	UniRef90_UPI000C75746C	102.0	6.5e-27	holin	N/A
eggNOG-mapper	UHGV-1903376_12	626523.GCWU000342_01012	93.2	5.44e-24	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1903376_12	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1903376_12	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_13	phrog_20388	73.5	3.4e-21	endolysin	lysis
UniRef90	UHGV-1903376_13	UniRef90_A0A3A9FAE9	150.0	2.31e-36	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1903376_13	610130.Closa_1415	164.0	5.32493e-44	Peptidoglycan-binding domain 1 protein	N/A
Pfam	UHGV-1903376_13	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-1903376_13	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1903376_13	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1903376_13	PF18013,PF01471,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_14	phrog_64	100.5	1.6e-29	portal protein	head and packaging
UniRef90	UHGV-1903376_14	UniRef90_A0A843JBG3	316.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1903376_14	871584.D9ZNC8_9CAUD	115.0	2.07e-24	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1903376_14	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_16	phrog_1657	181.8	0	head morphogenesis	head and packaging
UniRef90	UHGV-1903376_16	UniRef90_A0A1C6BCQ4	130.0	2.89e-32	Phage head morphogenesis protein, SPP1 gp7 family	N/A
eggNOG-mapper	UHGV-1903376_16	1121342.AUCO01000012_gene1699	118.0	2.16e-28	N/A	N/A
structural_annotation	UHGV-1903376_19	MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_20	phrog_909	77.4	1.5e-22	major head protein	head and packaging
UniRef90	UHGV-1903376_20	UniRef90_UPI001CF15A5E	66.6	0.0000000000195	head decoration protein	N/A
eggNOG-mapper	UHGV-1903376_20	1158612.I580_01911	87.4	2.15e-20	N/A	N/A
structural_annotation	UHGV-1903376_20	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_21	phrog_29	245.0	0	major head protein	head and packaging
UniRef90	UHGV-1903376_21	UniRef90_UPI00082C04A5	389.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1903376_21	1158612.I580_01912	311.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1903376_21	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1903376_21	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1903376_22	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_23	phrog_4020	66.5	3.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-1903376_23	445335.CBN_3083	67.4	0.000000000000118	N/A	N/A
PHROG	UHGV-1903376_24	phrog_8435	53.7	0.000000000000003	N/A	unknown function
structural_annotation	UHGV-1903376_24	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1903376_25	1443125.Z962_p0058	77.8	7.35e-17	N/A	N/A
Pfam	UHGV-1903376_25	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1903376_25	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_26	phrog_7585	73.2	4.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-1903376_26	748727.CLJU_c31260	59.7	0.00000000128	N/A	N/A
structural_annotation	UHGV-1903376_26	PF05657,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_27	phrog_6686	132.1	3.6e-39	tail tube protein	tail
UniRef90	UHGV-1903376_27	UniRef90_A0A3R6E592	135.0	1.96e-35	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1903376_27	748727.CLJU_c31250	85.5	3.88e-17	N/A	N/A
structural_annotation	UHGV-1903376_27	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_28	phrog_6280	121.4	4.8e-36	N/A	unknown function
UniRef90	UHGV-1903376_28	UniRef90_A0A845LLP6	119.0	6.57e-32	Esterase	N/A
eggNOG-mapper	UHGV-1903376_28	1443125.Z962_12410	107.0	7.04e-28	N/A	N/A
PHROG	UHGV-1903376_29	phrog_1533	483.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1903376_29	UniRef90_A0A351TJS6	424.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1903376_29	1410670.JHXF01000015_gene2302	426.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1903376_29	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1903376_29	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1903376_29	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1903376_29	PF10145,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_30	phrog_36410	63.4	2.8e-18	N/A	unknown function
UniRef90	UHGV-1903376_30	UniRef90_A0A6N3FT50	106.0	4.27e-23	Phage tail protein	N/A
eggNOG-mapper	UHGV-1903376_30	649747.HMPREF0083_00649	70.9	0.0000000000396	Phage tail protein	N/A
COG	UHGV-1903376_30	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1903376_30	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_31	phrog_538	147.1	1.09301e-43	minor tail protein	tail
UniRef90	UHGV-1903376_31	UniRef90_A0A843GTT7	145.0	3.33e-36	Siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1903376_31	536232.CLM_2921	101.0	6.12e-21	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-1903376_31	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
PHROG	UHGV-1903376_32	phrog_1220	186.2	0	head protein	head and packaging
eggNOG-mapper	UHGV-1903376_32	1211817.CCAT010000079_gene1381	105.0	5.1e-25	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-1903376_32	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_34	phrog_36	46.8	0.0000000000006	transcriptional regulator	transcription regulation
Pfam	UHGV-1903376_34	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-1903376_34	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1903376_34	PF04545,MF_00674,NF008895,COG2739	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1903376_39	PF06003,MF_01077,NF037951,COG1862	N/A	N/A	N/A	N/A
KOfam	UHGV-1903376_41	K02316	113.3	1.4e-33	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1903376_41	phrog_47	133.1	3e-39	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1903376_41	UniRef90_A0A843GN62	285.0	0	Toprim domain-containing protein	N/A
eggNOG-mapper	UHGV-1903376_41	1292035.H476_1082	84.3	0.00000000000000348	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	N/A
PADLOC	UHGV-1903376_41	drt-UG29	40.6	2.8e-23	DRT	DRT
Pfam	UHGV-1903376_41	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-1903376_41	PF13155	N/A	N/A	Toprim-like	Toprim_2
COG	UHGV-1903376_41	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1903376_41	PF01807,PF13155,MF_00974,TIGR01391,COG0358	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1903376_43	PF08804	N/A	N/A	N/A	N/A
KOfam	UHGV-1903376_44	K02337	721.9	0	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	N/A
PHROG	UHGV-1903376_44	phrog_405	655.3	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1903376_44	UniRef90_A0A843GPT9	873.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1903376_44	224324.aq_1008	426.0	0	TIGRFAM DNA polymerase III, alpha subunit	N/A
Pfam	UHGV-1903376_44	PF02811	N/A	N/A	PHP domain	PHP
Pfam	UHGV-1903376_44	PF07733	N/A	N/A	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
Pfam	UHGV-1903376_44	PF17657	N/A	N/A	Bacterial DNA polymerase III alpha subunit finger domain	DNA_pol3_finger
Pfam	UHGV-1903376_44	PF14579	N/A	N/A	Helix-hairpin-helix motif	HHH_6
NCBIFam	UHGV-1903376_44	TIGR00594.1	N/A	N/A	DNA polymerase III subunit alpha	N/A
COG	UHGV-1903376_44	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
structural_annotation	UHGV-1903376_44	PF07733,PF02811,PF17657,PF14579,MF_01902,TIGR00594,COG0587	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_45	phrog_236	84.4	2.2e-24	nucleotide kinase	other
UniRef90	UHGV-1903376_45	UniRef90_UPI001629716A	69.7	0.0000000000038	N/A	N/A
eggNOG-mapper	UHGV-1903376_45	1123263.AUKY01000015_gene1590	73.6	0.00000000000000391	N/A	N/A
Pfam	UHGV-1903376_45	PF11753	N/A	N/A	N/A	DUF3310
KOfam	UHGV-1903376_46	K03553	112.3	0	recA; recombination protein RecA	N/A
PHROG	UHGV-1903376_46	phrog_32482	124.7	5.3e-37	PhoH-like phosphate starvation-inducible	other
UniRef90	UHGV-1903376_46	UniRef90_A0A843GSV7	836.0	0	RECA_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1903376_46	272633.26454099	104.0	1.09e-21	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	N/A
Pfam	UHGV-1903376_46	PF08423	N/A	N/A	Rad51	Rad51
Pfam	UHGV-1903376_46	PF00154	N/A	N/A	recA bacterial DNA recombination protein	RecA
COG	UHGV-1903376_46	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-1903376_47	PF01775,MF_00273,NF010188,COG2157	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_48	phrog_2506	65.5	5.9e-19	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1903376_48	UniRef90_A0A5D3IBF8	68.6	0.000000000713	PDDEXK_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1903376_48	1499968.TCA2_4616	75.5	0.000000000000562	DNA catabolic process, exonucleolytic	N/A
COG	UHGV-1903376_48	COG1468	N/A	N/A	CRISPR/Cas system-associated exonuclease Cas4, RecB family	N/A
structural_annotation	UHGV-1903376_48	PF01930,MF_03030,TIGR00372,COG5377	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1903376_49	665950.HMPREF1025_02540	59.7	0.000000000787	N/A	N/A
structural_annotation	UHGV-1903376_52	PF18358	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_53	phrog_159	49.9	0.000000000000039	RuvC-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1903376_53	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_54	phrog_1909	138.3	4.80001e-41	N/A	unknown function
eggNOG-mapper	UHGV-1903376_54	1458697.W6E8E8_9CAUD	75.5	0.000000000000956	N/A	N/A
KOfam	UHGV-1903376_55	K09882	139.9	1.99993e-41	cobS; cobaltochelatase CobS [EC:6.6.1.2]	N/A
PHROG	UHGV-1903376_55	phrog_249	205.9	0	porphyrin biosynthesis	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1903376_55	UniRef90_G2ZIS3	259.0	0	AAA_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1903376_55	1048830.GUU_04164	167.0	1.4013e-45	AAA domain (dynein-related subfamily)	N/A
Pfam	UHGV-1903376_55	PF07728	N/A	N/A	AAA domain (dynein-related subfamily)	AAA_5
COG	UHGV-1903376_55	COG0714	N/A	N/A	MoxR-like ATPase	N/A
structural_annotation	UHGV-1903376_55	PF07728,MF_00016,TIGR01650,COG0714	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_59	phrog_6466	66.4	3.5e-19	DNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1903376_59	UniRef90_A0A843GQD5	96.3	1.08e-23	DNA_ligase_aden domain-containing protein	N/A
eggNOG-mapper	UHGV-1903376_59	691965.D4P7L3_9CAUD	61.6	0.00000000114	helicase activity	N/A
PHROG	UHGV-1903376_62	phrog_2002	57.8	2.6e-17	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1903376_62	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1903376_63	PF21138,NF009630,COG2375	N/A	N/A	N/A	N/A
KOfam	UHGV-1903376_67	K03469	147.7	9.94922e-44	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1903376_67	phrog_531	138.7	3.09995e-41	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1903376_67	UniRef90_A0A1M5KFY9	127.0	9.17e-35	Ribonuclease H	N/A
eggNOG-mapper	UHGV-1903376_67	1291050.JAGE01000002_gene3473	117.0	1.65e-31	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-1903376_67	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1903376_67	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1903376_67	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1903376_68	PF14084	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_70	phrog_2412	53.1	0.0000000000000043	N/A	unknown function
eggNOG-mapper	UHGV-1903376_70	226185.EF_2113	54.3	0.000000774	Stress-induced bacterial acidophilic repeat motif	N/A
KOfam	UHGV-1903376_72	K03497	44.5	0.0000000000029	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1903376_72	phrog_620	156.4	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1903376_72	UniRef90_A0A2P1CCG3	223.0	0	Adenine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1903376_72	1399942.U3PCR3_9CAUD	223.0	0	helicase activity	N/A
PADLOC	UHGV-1903376_72	MTase_II_00015	87.9	1.5e-25	Type II methyltransferase	RM
Pfam	UHGV-1903376_72	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
structural_annotation	UHGV-1903376_72	PF02195,TIGR00180,COG5119	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_73	phrog_842	225.4	0	beta-glucosyl-HMC-alpha-glucosyltransferase	other
UniRef90	UHGV-1903376_73	UniRef90_A0A516LJ12	297.0	0	Putative beta-glucosyl-HMC-alpha-glucosyl-transferase	N/A
eggNOG-mapper	UHGV-1903376_73	508419.F8J156_9CAUD	222.0	0	N/A	N/A
Pfam	UHGV-1903376_73	PF20691	N/A	N/A	TET-Associated Glycosyltransferase	TAGT
structural_annotation	UHGV-1903376_73	PF20691,NF041865,COG1216	N/A	N/A	N/A	N/A
PHROG	UHGV-1903376_76	phrog_22292	115.8	2.4e-34	N/A	unknown function

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1903376	Yes	51,154	34	100	1
UHGV-0081878	No	42,869	34	100	1
UHGV-1457701	No	51,933	34	100	1
UHGV-0092005	No	51,084	34	100	1
UHGV-1392026	No	47,299	34	95	1
UHGV-2110525	No	44,831	34	89	1
UHGV-1456166	No	42,971	34	86	1
UHGV-0088924	No	37,058	34	74	1
UHGV-1400698	No	32,668	34	65	1
UHGV-0308796	No	30,878	34	62	1
UHGV-0071388	No	30,802	34	61	1
UHGV-1469559	No	30,794	34	61	1
UHGV-1408361	No	27,124	35	54	1
UHGV-0207396	No	23,083	35	46	1
UHGV-1791878	No	21,009	35	42	1
UHGV-1667363	No	18,433	33	37	1
UHGV-0186069	No	18,349	33	37	1
UHGV-0241915	No	18,521	33	37	1
UHGV-0071386	No	16,587	33	34	1
UHGV-1608343	No	16,492	33	33	1
UHGV-1771386	No	15,607	33	31	1
UHGV-0094375	No	14,913	33	30	1
UHGV-0087086	No	11,699	33	23	1
UHGV-0263135	No	10,992	34	22	1
UHGV-1723403	No	10,309	32	21	1
UHGV-1553365	No	10,182	33	21	1
UHGV-1545560	No	10,278	33	20	1