vOTU vOTU-005717

vOTU: vOTU-005717

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-005717
Number of genomes	9
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000436735
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-01451 → vSUBGEN-09117 → vOTU-005717
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0069918
Biosample ID	SAMEA2737784
Genome length (bp)	35,027 bps
CheckV completeness	100.00% (Complete)
CDS count	60
CDS density	95.43%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	162	Host agreement	83.95
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000436735	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0069918_2	UniRef90_A0A7M1RTM1	78.2	0.00000000000000571	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0069918_2	1378168.N510_03079	70.9	0.00000000000144	N/A	N/A
PHROG	UHGV-0069918_5	phrog_36767	59.2	5.8e-17	N/A	unknown function
UniRef90	UHGV-0069918_5	UniRef90_UPI00067E7E25	79.0	1.65e-17	N/A	N/A
UniRef90	UHGV-0069918_6	UniRef90_A0A843IZ65	63.5	0.0000000000106	Sigma70_r4 domain-containing protein	N/A
Pfam	UHGV-0069918_6	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-0069918_6	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0069918_6	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0069918_7	K11062	110.4	1.7e-32	entD; probable enterotoxin D	N/A
PHROG	UHGV-0069918_7	phrog_1794	111.0	1.5e-32	amidase	lysis
UniRef90	UHGV-0069918_7	UniRef90_A0A3D4VSU2	165.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0069918_7	411470.RUMGNA_02087	149.0	1.72e-39	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0069918_7	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0069918_7	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0069918_7	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_8	phrog_6918	92.0	4.5e-27	holin	lysis
UniRef90	UHGV-0069918_8	UniRef90_A0A316QCY7	94.0	8.52e-23	Holin	N/A
eggNOG-mapper	UHGV-0069918_8	1297617.JPJD01000020_gene301	92.4	5.94e-23	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0069918_8	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0069918_8	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_10	phrog_937	51.5	0.000000000000018	hemolysin	other
eggNOG-mapper	UHGV-0069918_10	1519439.JPJG01000023_gene533	74.7	9.27e-16	N/A	N/A
KOfam	UHGV-0069918_11	K20846	66.1	3.4e-19	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-0069918_11	phrog_215	97.6	2.2e-28	structural protein with Ig domain	head and packaging
UniRef90	UHGV-0069918_11	UniRef90_A0A1I1Z9R5	110.0	4e-22	Calcineurin-like phosphoesterase	N/A
eggNOG-mapper	UHGV-0069918_11	485916.Dtox_1961	83.2	0.000000000000173	PFAM Bacterial Ig-like domain (group 2)	N/A
Pfam	UHGV-0069918_11	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0069918_11	COG3210	N/A	N/A	Large exoprotein involved in heme utilization or adhesion	N/A
structural_annotation	UHGV-0069918_11	PF02368,PF09423,MF_00575,NF003743,NF005261,COG5492	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0069918_12	357276.EL88_03475	60.5	0.000000967	Leucine-rich repeat (LRR) protein	N/A
COG	UHGV-0069918_12	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0069918_12	PF10651,NF033814	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0069918_13	PF18614,MF_00085,NF003082,COG0361	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_14	phrog_26795	129.1	3.1e-38	N/A	unknown function
eggNOG-mapper	UHGV-0069918_14	1195236.CTER_5102	152.0	3.85e-40	N/A	N/A
structural_annotation	UHGV-0069918_14	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0069918_15	UniRef90_A0A3D0W045	194.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0069918_15	1195236.CTER_5103	130.0	8.91e-29	N/A	N/A
structural_annotation	UHGV-0069918_15	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_16	phrog_8462	149.7	3.08286e-44	tail length tape measure protein	tail
UniRef90	UHGV-0069918_16	UniRef90_UPI00098F054B	256.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0069918_16	509191.AEDB02000020_gene3249	245.0	0	tail tape measure protein, TP901	N/A
Pfam	UHGV-0069918_16	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0069918_16	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0069918_16	TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0069918_17	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_18	phrog_88	86.0	4.8e-25	major tail protein	tail
UniRef90	UHGV-0069918_18	UniRef90_S0FUN2	116.0	2.37e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0069918_18	1195236.CTER_5106	116.0	3.98e-30	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0069918_18	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0069918_18	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0069918_18	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_19	phrog_5	42.2	0.000000000019	tail completion or Neck1 protein	connector
structural_annotation	UHGV-0069918_19	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0069918_20	1487921.DP68_11350	65.1	0.00000000000311	N/A	N/A
structural_annotation	UHGV-0069918_20	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_21	phrog_1951	75.2	6.6e-22	head-tail adaptor	connector
UniRef90	UHGV-0069918_21	UniRef90_A0A1F8UNT5	65.1	0.0000000000123	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0069918_21	1094508.Tsac_2422	54.7	0.0000000285	Phage head-tail joining protein	N/A
Pfam	UHGV-0069918_21	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0069918_21	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0069918_21	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0069918_21	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_22	phrog_5223	42.1	0.000000000012	neck protein	connector
UniRef90	UHGV-0069918_22	UniRef90_E6MGY0	54.3	0.000000177	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-0069918_22	887929.HMP0721_1264	54.3	0.0000000297	N/A	N/A
PHROG	UHGV-0069918_23	phrog_10	180.8	0	major head protein	head and packaging
UniRef90	UHGV-0069918_23	UniRef90_UPI00189AE5FE	410.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0069918_23	1280689.AUJC01000011_gene1521	389.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0069918_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0069918_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0069918_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0069918_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0069918_24	K01358	131.1	1.3e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0069918_24	phrog_94	202.5	0	head maturation protease	head and packaging
UniRef90	UHGV-0069918_24	UniRef90_UPI0018979DC8	208.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0069918_24	1280689.AUJC01000011_gene1520	192.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0069918_24	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0069918_24	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0069918_24	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_25	phrog_12	178.7	0	portal protein	head and packaging
UniRef90	UHGV-0069918_25	UniRef90_UPI001898FCCE	503.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0069918_25	626523.GCWU000342_01027	497.0	0	Portal protein	N/A
Pfam	UHGV-0069918_25	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0069918_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0069918_25	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_26	phrog_9	386.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0069918_26	UniRef90_UPI001D07C789	798.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0069918_26	1203606.HMPREF1526_00981	741.0	0	Terminase	N/A
Pfam	UHGV-0069918_26	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0069918_26	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0069918_26	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0069918_26	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_27	phrog_1066	129.4	1.4e-38	N/A	unknown function
eggNOG-mapper	UHGV-0069918_27	1341151.ASZU01000004_gene265	122.0	3.78e-34	N/A	N/A
structural_annotation	UHGV-0069918_27	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_28	phrog_119	49.6	0.000000000000055	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0069918_28	UniRef90_A0A174XSZ8	125.0	5.87e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-0069918_28	1235793.C809_01915	119.0	3.49e-33	HNH endonuclease	N/A
Pfam	UHGV-0069918_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0069918_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0069918_29	1297617.JPJD01000059_gene2640	80.9	1.14e-17	N/A	N/A
structural_annotation	UHGV-0069918_29	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_30	phrog_3584	117.7	8.4e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0069918_30	537013.CLOSTMETH_02141	62.4	0.00000000451	N/A	N/A
structural_annotation	UHGV-0069918_30	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_37	phrog_190	107.4	1.4e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0069918_37	UniRef90_UPI0006C2AC63	125.0	9.98e-34	N/A	N/A
eggNOG-mapper	UHGV-0069918_37	693746.OBV_25250	118.0	9.3e-32	N/A	N/A
Pfam	UHGV-0069918_37	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0069918_37	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_40	phrog_31029	62.9	4.2e-18	N/A	unknown function
PHROG	UHGV-0069918_42	phrog_3136	132.7	1.4e-39	N/A	unknown function
UniRef90	UHGV-0069918_42	UniRef90_A0A843H9M8	105.0	4.04e-25	ASCH domain-containing protein	N/A
COG	UHGV-0069918_42	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0069918_42	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_43	phrog_954	200.7	0	DNA methyltransferase	other
UniRef90	UHGV-0069918_43	UniRef90_A0A810Q0N4	291.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0069918_43	1280698.AUJS01000007_gene1028	267.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-0069918_43	MTase_II_00074	198.3	0	Type II methyltransferase	RM
Pfam	UHGV-0069918_43	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0069918_43	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-0069918_43	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
Pfam	UHGV-0069918_44	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0069918_44	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0069918_46	phrog_9298	59.6	4.4e-17	radical SAM domain protein	other
UniRef90	UHGV-0069918_46	UniRef90_A0A841L4D7	314.0	0	Radical SAM superfamily enzyme YgiQ (UPF0313 family)	N/A
eggNOG-mapper	UHGV-0069918_46	742738.HMPREF9460_03770	287.0	0	radical SAM domain protein	N/A
COG	UHGV-0069918_46	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0069918_46	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0069918_49	PF05082	N/A	N/A	N/A	N/A
COG	UHGV-0069918_50	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
UniRef90	UHGV-0069918_51	UniRef90_A0A098GES5	102.0	2.31e-26	Putative phage associated protein	N/A
structural_annotation	UHGV-0069918_51	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
UniRef90	UHGV-0069918_56	UniRef90_UPI0018C81604	75.9	1.18e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0069918_56	484770.UFO1_1664	69.3	0.00000000000000677	N/A	N/A
structural_annotation	UHGV-0069918_56	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0069918_57	K22299	49.9	0.000000000000079	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0069918_57	phrog_8	52.6	0.000000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0069918_57	UniRef90_A0A7X5KNQ8	63.5	0.000000000889	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0069918_57	1292035.H476_1037	66.6	0.0000000000116	sequence-specific DNA binding	N/A
Pfam	UHGV-0069918_57	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0069918_57	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0069918_58	1236902.ANAS01000009_gene2676	63.5	0.00000000478	TM2 domain	N/A
COG	UHGV-0069918_58	COG2314	N/A	N/A	N/A	N/A
UniRef90	UHGV-0069918_59	UniRef90_A7VNR4	56.2	0.00000046	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0069918_59	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0069918_59	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0069918_59	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0069918_60	K06400	350.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0069918_60	phrog_95	348.3	0	integrase	integration and excision
UniRef90	UHGV-0069918_60	UniRef90_UPI0019572FB3	489.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0069918_60	1235835.C814_00825	401.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0069918_60	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0069918_60	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0069918_60	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0069918_60	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0069918_60	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0069918	Yes	35,027	56	100	1
UHGV-0188828	No	35,027	56	100	1
UHGV-1446085	No	37,158	57	100	1
UHGV-0156744	No	37,042	57	100	1
UHGV-1448632	No	37,042	57	100	1
UHGV-1509680	No	35,862	56	100	1
UHGV-1408867	No	26,123	57	71	1
UHGV-0095801	No	18,666	57	51	1
UHGV-1884035	No	17,470	58	48	1