vOTU vOTU-005797

vOTU: vOTU-005797

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-005797
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-06288 → vSUBGEN-29159 → vOTU-005797
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0010517
Biosample ID	SAMEA4765580
Genome length (bp)	44,168 bps
CheckV completeness	100.00% (Complete)
CDS count	75
CDS density	89.28%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	688	Host agreement	97.82
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0010517_2	K07273	167.2	0	acm; lysozyme	N/A
PHROG	UHGV-0010517_2	phrog_291	134.5	9.7e-40	endolysin	lysis
UniRef90	UHGV-0010517_2	UniRef90_E2ZES5	340.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0010517_2	748224.HMPREF9436_00154	340.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0010517_2	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0010517_2	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0010517_2	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_3	phrog_1382	48.9	0.000000000000042	N/A	unknown function
eggNOG-mapper	UHGV-0010517_3	411468.CLOSCI_00272	45.1	0.00000937	N/A	N/A
PHROG	UHGV-0010517_5	phrog_9534	53.6	0.0000000000000027	head protein	head and packaging
eggNOG-mapper	UHGV-0010517_5	748224.HMPREF9436_00405	173.0	0	domain, Protein	N/A
COG	UHGV-0010517_5	COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_6	phrog_3558	189.0	0	tail protein	tail
eggNOG-mapper	UHGV-0010517_6	610130.Closa_0754	70.5	0.000000000744	N/A	N/A
Pfam	UHGV-0010517_6	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0010517_6	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0010517_6	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0010517_7	UniRef90_A0A417QGC1	118.0	5.75e-29	MtfA protein	N/A
eggNOG-mapper	UHGV-0010517_7	411490.ANACAC_00709	101.0	4.1e-23	phage tail	N/A
COG	UHGV-0010517_7	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0010517_7	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_8	phrog_9959	83.4	1.4e-24	tail length tape measure protein	tail
UniRef90	UHGV-0010517_8	UniRef90_A0A6N7TLD3	1097.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0010517_8	1492737.FEM08_12070	142.0	1.9e-32	tape measure	N/A
Pfam	UHGV-0010517_8	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0010517_8	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0010517_8	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0010517_8	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_11	phrog_885	66.8	2.7e-19	major tail protein	tail
eggNOG-mapper	UHGV-0010517_11	1111121.HMPREF1247_0789	155.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0010517_11	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010517_12	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_13	phrog_17977	43.3	0.0000000000055	N/A	unknown function
UniRef90	UHGV-0010517_13	UniRef90_A0A844DHJ8	122.0	9.92e-34	Phage head closure protein	N/A
structural_annotation	UHGV-0010517_13	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_15	phrog_544	108.3	7.1e-32	major head protein	head and packaging
UniRef90	UHGV-0010517_15	UniRef90_A0A1C6B5R0	318.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0010517_15	476272.RUMHYD_01776	283.0	0	N/A	N/A
structural_annotation	UHGV-0010517_15	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010517_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_18	phrog_5	51.5	0.000000000000025	tail completion or Neck1 protein	connector
UniRef90	UHGV-0010517_18	UniRef90_A0A6N7TNP6	286.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0010517_18	1123309.AQYB01000018_gene814	91.7	1.16e-21	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0010517_18	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0010517_18	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0010517_18	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
KOfam	UHGV-0010517_19	K07741	94.3	2.9e-27	antB; anti-repressor protein	N/A
PHROG	UHGV-0010517_19	phrog_373	147.5	8.96831e-44	anti-repressor	transcription regulation
UniRef90	UHGV-0010517_19	UniRef90_UPI0012DFCA1F	192.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0010517_19	114416.Q8LTS4_9CAUD	143.0	2.09e-39	DNA binding	N/A
Pfam	UHGV-0010517_19	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0010517_19	PF10552	N/A	N/A	ORF6C domain	ORF6C
structural_annotation	UHGV-0010517_19	PF10552,PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010517_20	PF07342	N/A	N/A	N/A	N/A
KOfam	UHGV-0010517_22	K07727	51.6	0.000000000000026	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0010517_22	UniRef90_A0A2V2FGW5	108.0	2.03e-29	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0010517_22	1378168.N510_01451	89.0	1.22e-22	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0010517_22	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0010517_22	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_23	phrog_2468	81.4	1.6e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0010517_23	UniRef90_A0A6N7TLR7	619.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0010517_23	1504822.CCNO01000013_gene286	108.0	4.89e-23	cell adhesion	N/A
Pfam	UHGV-0010517_23	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0010517_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010517_23	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_25	phrog_64	122.8	1.4e-36	portal protein	head and packaging
UniRef90	UHGV-0010517_25	UniRef90_A0A6N7TNT3	878.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0010517_25	642492.Clole_2764	83.2	0.000000000000031	phage portal protein, SPP1	N/A
Pfam	UHGV-0010517_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0010517_25	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0010517_26	K06909	142.3	4.30058e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0010517_26	phrog_10250	174.6	0	N/A	unknown function
UniRef90	UHGV-0010517_26	UniRef90_A0A844D8I4	840.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0010517_26	411490.ANACAC_00783	492.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0010517_26	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0010517_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0010517_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0010517_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0010517_26	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0010517_27	UniRef90_UPI0018CC2891	117.0	1.04e-30	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0010517_27	1235790.C805_00037	112.0	2.6e-29	N/A	N/A
structural_annotation	UHGV-0010517_27	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_28	phrog_36	40.2	0.000000000058	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0010517_28	PF07374	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_29	phrog_9298	314.4	0	radical SAM domain protein	other
UniRef90	UHGV-0010517_29	UniRef90_A0A6L5TFB3	589.0	0	Radical SAM protein	N/A
eggNOG-mapper	UHGV-0010517_29	552396.HMPREF0863_02707	325.0	0	radical SAM domain protein	N/A
COG	UHGV-0010517_29	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0010517_29	MF_01864,NF010916,COG2516	N/A	N/A	N/A	N/A
KOfam	UHGV-0010517_30	K01160	55.1	0.0000000000000023	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0010517_30	phrog_34	56.4	6.6e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0010517_30	UniRef90_A0A6N7TND6	228.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0010517_30	875454.BAEW01000002_gene491	142.0	3.30006e-42	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0010517_30	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0010517_30	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0010517_30	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0010517_35	K02086	58.9	8.5e-17	dnaD; DNA replication protein	N/A
PHROG	UHGV-0010517_35	phrog_15768	69.8	2.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0010517_35	476272.RUMHYD_03358	65.1	0.00000000123	N/A	N/A
Pfam	UHGV-0010517_35	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0010517_35	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0010517_35	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-0010517_35	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0010517_36	K03111	139.8	2.89999e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0010517_36	phrog_44	146.4	1.49939e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0010517_36	UniRef90_A0A329TTF5	217.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0010517_36	748224.HMPREF9436_00638	229.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0010517_36	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0010517_36	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0010517_36	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0010517_36	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0010517_36	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_37	phrog_7838	118.8	4e-35	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0010517_37	UniRef90_A0A8D9UGW3	188.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0010517_37	742767.HMPREF9456_02052	145.0	4.00996e-41	N/A	N/A
structural_annotation	UHGV-0010517_37	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010517_39	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010517_40	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010517_41	PF10743,NF033787	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0010517_45	1121865.OMW_01950	76.6	3.22e-17	N/A	N/A
structural_annotation	UHGV-0010517_45	PF17516,NF007197	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_46	phrog_15946	79.7	4.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-0010517_46	1041147.AUFB01000014_gene330	57.8	0.0000000526	N/A	N/A
PHROG	UHGV-0010517_47	phrog_4652	93.0	6e-28	N/A	unknown function
eggNOG-mapper	UHGV-0010517_47	397290.C810_01459	159.0	0	N/A	N/A
structural_annotation	UHGV-0010517_47	TIGR02582,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-0010517_48	K17080	80.1	9.1e-24	PHB1; prohibitin 1	N/A
PHROG	UHGV-0010517_48	phrog_200	157.4	0	lipoprotein	other
UniRef90	UHGV-0010517_48	UniRef90_D4KCF4	382.0	0	Membrane protease subunits, stomatin/prohibitin homologs	N/A
eggNOG-mapper	UHGV-0010517_48	657322.FPR_23460	382.0	0	prohibitin homologues	N/A
Pfam	UHGV-0010517_48	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-0010517_48	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
structural_annotation	UHGV-0010517_48	PF01145,MF_01562,NF008181,COG0330	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_49	phrog_2593	82.3	4.6e-24	anti-repressor	transcription regulation
UniRef90	UHGV-0010517_49	UniRef90_UPI001C2426FA	149.0	3.91e-40	phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-0010517_49	698769.JFBD01000002_gene2778	148.0	2.95e-40	BRO family, N-terminal domain	N/A
Pfam	UHGV-0010517_49	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0010517_49	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0010517_49	PF02498,COG3617	N/A	N/A	N/A	N/A
KOfam	UHGV-0010517_54	K22300	61.4	2e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0010517_54	phrog_2967	47.7	0.00000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0010517_54	UniRef90_A0A844DFR0	241.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0010517_54	748224.HMPREF9436_01444	173.0	0	N/A	N/A
PADLOC	UHGV-0010517_54	retron_type_VI_hth_cluster2_1	40.6	0.000000000037	N/A	Retron
Pfam	UHGV-0010517_54	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0010517_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0010517_54	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0010517_56	UniRef90_A0A1Y4A0E8	149.0	1.37e-37	SAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0010517_56	1280696.ATVY01000034_gene3237	139.0	1.31e-34	Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation	N/A
structural_annotation	UHGV-0010517_57	PF16900,NF040991	N/A	N/A	N/A	N/A
UniRef90	UHGV-0010517_60	UniRef90_A0A6N7TLT0	327.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0010517_60	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0010517_60	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0010517_60	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0010517_61	K14059	140.1	2.79993e-41	int; integrase	N/A
PHROG	UHGV-0010517_61	phrog_1	161.4	0	integrase	integration and excision
UniRef90	UHGV-0010517_61	UniRef90_A0A6N7TNQ4	396.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0010517_61	411471.SUBVAR_05137	234.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0010517_61	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0010517_61	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0010517_61	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010517_63	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_64	phrog_20016	195.7	0	N/A	unknown function
UniRef90	UHGV-0010517_64	UniRef90_A0A285PT46	209.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0010517_64	1226322.HMPREF1545_00077	179.0	0	N/A	N/A
structural_annotation	UHGV-0010517_64	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_66	phrog_16490	196.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0010517_66	397290.C810_01328	130.0	2.61e-33	N/A	N/A
PHROG	UHGV-0010517_67	phrog_22984	70.1	3e-20	N/A	unknown function
PHROG	UHGV-0010517_68	phrog_21718	88.2	1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0010517_68	397290.C810_05210	82.0	1.47e-17	N/A	N/A
PHROG	UHGV-0010517_69	phrog_3754	99.7	2.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-0010517_69	1235790.C805_00054	111.0	5.48e-30	N/A	N/A
eggNOG-mapper	UHGV-0010517_70	1160721.RBI_I00206	59.3	0.0000000000359	N/A	N/A
structural_annotation	UHGV-0010517_70	PF10723	N/A	N/A	N/A	N/A
KOfam	UHGV-0010517_74	K19721	69.7	1.5e-20	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-0010517_74	phrog_5073	89.9	2.6e-26	tail fiber protein	tail
UniRef90	UHGV-0010517_74	UniRef90_UPI0018835F0C	368.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0010517_74	411483.FAEPRAA2165_00757	166.0	0	N/A	N/A
Pfam	UHGV-0010517_74	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0010517_74	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0010517_75	phrog_15303	95.3	4.7e-28	N/A	unknown function
Pfam	UHGV-0010517_75	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0010517	Yes	44,168	54	100	1
UHGV-0024390	No	44,166	54	100	1
UHGV-0026259	No	44,271	54	100	1