vOTU vOTU-005966

vOTU: vOTU-005966

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-005966
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00245 → vSUBFAM-02042 → vGENUS-23543 → vSUBGEN-46204 → vOTU-005966
Host lineage
Host range breadth
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1356435
Biosample ID	N/A
Genome length (bp)	67,838 bps
CheckV completeness	100.00% (Complete)
CDS count	102
CDS density	93.10%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1356435_1	phrog_422	303.8	0	major head protein	head and packaging
UniRef90	UHGV-1356435_1	UniRef90_A0A3C2DU69	303.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1356435_1	1235790.C805_00073	312.0	0	N/A	N/A
structural_annotation	UHGV-1356435_1	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1356435_2	phrog_31690	64.8	1.6e-18	N/A	unknown function
structural_annotation	UHGV-1356435_2	PF18207	N/A	N/A	N/A	N/A
Pfam	UHGV-1356435_3	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1356435_4	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1356435_5	1285586.H131_11763	66.2	0.00000000000815	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1356435_5	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1356435_5	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356435_6	PF09646	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356435_7	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356435_8	PF19591,TIGR01674	N/A	N/A	N/A	N/A
COG	UHGV-1356435_10	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-1356435_11	phrog_1194	62.5	6.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-1356435_11	665956.HMPREF1032_03629	65.9	0.00000000000727	N/A	N/A
structural_annotation	UHGV-1356435_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1356435_12	phrog_13879	120.9	2.3e-36	N/A	unknown function
eggNOG-mapper	UHGV-1356435_12	1120746.CCNL01000014_gene2107	69.3	0.00000000196	N/A	N/A
UniRef90	UHGV-1356435_13	UniRef90_UPI00114428A3	84.3	0.00000000000141	InlB B-repeat-containing protein	N/A
eggNOG-mapper	UHGV-1356435_13	97138.C820_00171	80.1	0.00000000000417	COG COG3291 FOG PKD repeat	N/A
Pfam	UHGV-1356435_13	PF18998	N/A	N/A	Divergent InlB B-repeat domain	Flg_new_2
COG	UHGV-1356435_13	COG3209	N/A	N/A	N/A	N/A
KOfam	UHGV-1356435_20	K14440	55.1	1.8e-20	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1356435_20	phrog_62	218.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356435_20	UniRef90_A0A3B9Z822	282.0	0	Helicase ATP-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1356435_20	1416012.V5US64_9CAUD	201.0	0	helicase activity	N/A
Pfam	UHGV-1356435_20	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
structural_annotation	UHGV-1356435_20	PF00176,PF00271,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
KOfam	UHGV-1356435_22	K18951	261.1	0	gp30; DNA ligase [EC:6.5.1.1]	N/A
PHROG	UHGV-1356435_22	phrog_114	249.8	0	ATP-dependent DNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356435_22	UniRef90_UPI000F637511	298.0	0	ATP-dependent DNA ligase	N/A
eggNOG-mapper	UHGV-1356435_22	1308863.U5JA36_9CAUD	261.0	0	DNA ligase (ATP) activity	N/A
Pfam	UHGV-1356435_22	PF01068	N/A	N/A	ATP dependent DNA ligase domain	DNA_ligase_A_M
Pfam	UHGV-1356435_22	PF14743	N/A	N/A	DNA ligase OB-like domain	DNA_ligase_OB_2
structural_annotation	UHGV-1356435_22	PF01068,PF17879,MF_00407,NF002868,COG1793	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1356435_26	470145.BACCOP_03749	54.3	0.0000000331	N/A	N/A
COG	UHGV-1356435_26	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
PHROG	UHGV-1356435_30	phrog_7839	68.0	1.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-1356435_30	1415775.U729_3168	89.0	1.96e-20	N/A	N/A
structural_annotation	UHGV-1356435_30	PF08860	N/A	N/A	N/A	N/A
KOfam	UHGV-1356435_32	K01493	94.3	1.7e-27	comEB; dCMP deaminase [EC:3.5.4.12]	N/A
PHROG	UHGV-1356435_32	phrog_174	99.8	1.8e-29	dCMP deaminase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356435_32	UniRef90_R6R9A3	152.0	3.78351e-44	Putative dCMP deaminase	N/A
eggNOG-mapper	UHGV-1356435_32	545243.BAEV01000028_gene663	148.0	2.05991e-43	deaminase	N/A
Pfam	UHGV-1356435_32	PF00383	N/A	N/A	Cytidine and deoxycytidylate deaminase zinc-binding region	dCMP_cyt_deam_1
COG	UHGV-1356435_32	COG2131	N/A	N/A	Deoxycytidylate deaminase	N/A
structural_annotation	UHGV-1356435_32	PF00383,TIGR02571,COG2131	N/A	N/A	N/A	N/A
KOfam	UHGV-1356435_36	K07192	318.4	0	FLOT; flotillin	N/A
UniRef90	UHGV-1356435_36	UniRef90_A0A371J6N5	251.0	0	Flotillin family protein	N/A
eggNOG-mapper	UHGV-1356435_36	1301100.HG529329_gene4479	251.0	0	Band 7 protein	N/A
Pfam	UHGV-1356435_36	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
Pfam	UHGV-1356435_36	PF15975	N/A	N/A	Flotillin	Flot
COG	UHGV-1356435_36	COG2268	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356435_36	PF01145,MF_01562,NF008181,COG2268	N/A	N/A	N/A	N/A
PHROG	UHGV-1356435_38	phrog_298	70.7	1.9e-20	exonuclease	DNA, RNA and nucleotide metabolism
Pfam	UHGV-1356435_38	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
structural_annotation	UHGV-1356435_38	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
KOfam	UHGV-1356435_39	K07171	86.4	4.9e-25	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-1356435_39	phrog_1936	87.8	1.4e-25	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1356435_39	UniRef90_A0A1C6FDH1	80.1	5.28e-16	mRNA interferase	N/A
eggNOG-mapper	UHGV-1356435_39	926692.AZYG01000040_gene1502	77.0	0.00000000000000142	Toxic component of a toxin-antitoxin (TA) module	N/A
Pfam	UHGV-1356435_39	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-1356435_39	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
eggNOG-mapper	UHGV-1356435_41	658088.HMPREF0987_01134	87.8	3.75e-21	N/A	N/A
PHROG	UHGV-1356435_43	phrog_93	45.9	0.00000000000068	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356435_43	UniRef90_A0A2U1JUK2	96.3	5.52e-24	Recombinase RecB	N/A
eggNOG-mapper	UHGV-1356435_43	1158614.I592_02354	87.4	2.97e-21	Archaeal holliday junction resolvase (hjc)	N/A
COG	UHGV-1356435_43	COG1591	N/A	N/A	Holliday junction resolvase Hjc, archaeal type	N/A
structural_annotation	UHGV-1356435_43	PF01870,MF_01490,NF002581,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1356435_48	phrog_3754	44.6	0.00000000000052	N/A	unknown function
PHROG	UHGV-1356435_55	phrog_374	55.8	0.0000000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1356435_55	397291.C804_06294	53.9	0.000000391	transposase activity	N/A
COG	UHGV-1356435_55	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
PHROG	UHGV-1356435_57	phrog_6244	66.0	5.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-1356435_57	908337.HMPREF9257_0560	53.1	0.00000134	YqaJ-like viral recombinase domain	N/A
COG	UHGV-1356435_57	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
PHROG	UHGV-1356435_59	phrog_124	134.1	1.1e-39	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356435_59	UniRef90_UPI001F43F7F0	112.0	8.32e-26	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1356435_59	646529.Desaci_1280	124.0	4.13e-30	AAA domain	N/A
Pfam	UHGV-1356435_59	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1356435_59	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-1356435_59	PF13479,MF_00350,TIGR01618,COG2874	N/A	N/A	N/A	N/A
Pfam	UHGV-1356435_60	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-1356435_60	PF05037,MF_00292,NF038397,COG2053	N/A	N/A	N/A	N/A
PHROG	UHGV-1356435_61	phrog_1252	373.9	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356435_61	UniRef90_M5NWD7	310.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1356435_61	1274524.BSONL12_23100	310.0	0	DNA polymerase elongation subunit (Family B)	N/A
COG	UHGV-1356435_61	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-1356435_61	PF08490,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-1356435_62	phrog_761	75.9	6.1e-22	thymidylate kinase	other
Pfam	UHGV-1356435_62	PF02223	N/A	N/A	Thymidylate kinase	Thymidylate_kin
PHROG	UHGV-1356435_63	phrog_12184	52.0	2e-19	nucleotide pyrophosphohydrolase	other
UniRef90	UHGV-1356435_63	UniRef90_A0A843GTV8	81.3	0.00000000000000321	dUTP diphosphatase	N/A
Pfam	UHGV-1356435_63	PF08761	N/A	N/A	dUTPase	dUTPase_2
structural_annotation	UHGV-1356435_63	PF08761	N/A	N/A	N/A	N/A
KOfam	UHGV-1356435_65	K00560	74.9	4.8e-22	thyA, TYMS; thymidylate synthase [EC:2.1.1.45]	N/A
PHROG	UHGV-1356435_65	phrog_160	94.9	3.7e-28	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356435_65	UniRef90_A0A6H2A3P2	194.0	0	Putative thymidylate synthase	N/A
eggNOG-mapper	UHGV-1356435_65	420246.GTNG_1671	60.1	0.0000000576	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis	N/A
Pfam	UHGV-1356435_65	PF00303	N/A	N/A	Thymidylate synthase	Thymidylat_synt
COG	UHGV-1356435_65	COG0207	N/A	N/A	Thymidylate synthase	N/A
structural_annotation	UHGV-1356435_65	PF00303,MF_01686,TIGR03283,COG0207	N/A	N/A	N/A	N/A
KOfam	UHGV-1356435_71	K06919	48.8	0.000000000000091	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-1356435_71	phrog_864	163.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356435_71	UniRef90_UPI00156FE0C3	146.0	5.49e-33	phage/plasmid primase, P4 family	N/A
eggNOG-mapper	UHGV-1356435_71	762983.HMPREF9444_01503	122.0	6.73e-26	D5 N terminal like	N/A
Pfam	UHGV-1356435_71	PF19263	N/A	N/A	N/A	DUF5906
NCBIFam	UHGV-1356435_71	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1356435_71	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1356435_71	PF19263,PF08706,PF03288,PF09250,MF_04000,TIGR01613,COG3378	N/A	N/A	N/A	N/A
KOfam	UHGV-1356435_74	K06909	266.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1356435_74	phrog_3717	116.4	2.3e-34	terminase large subunit	head and packaging
UniRef90	UHGV-1356435_74	UniRef90_UPI001A9034D2	255.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1356435_74	445972.ANACOL_01839	254.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1356435_74	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1356435_74	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1356435_74	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1356435_74	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1356435_74	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356435_77	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-1356435_78	phrog_64	156.8	0	portal protein	head and packaging
UniRef90	UHGV-1356435_78	UniRef90_R6I230	167.0	7.73937e-42	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-1356435_78	1071073.KI530547_gene3808	76.3	0.00000000000709	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1356435_78	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1356435_78	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1356435_82	K07097	151.2	8.40779e-45	N/A	N/A
PHROG	UHGV-1356435_82	phrog_4771	103.0	2.9e-30	DHH phosphoesterase	other
UniRef90	UHGV-1356435_82	UniRef90_A0A267MPB5	110.0	1.25e-24	Phosphohydrolase	N/A
eggNOG-mapper	UHGV-1356435_82	406124.ACPC01000048_gene226	60.1	0.000000275	phosphohydrolase (DHH superfamily)	N/A
Pfam	UHGV-1356435_82	PF02272	N/A	N/A	DHHA1 domain	DHHA1
COG	UHGV-1356435_82	COG2404	N/A	N/A	Oligoribonuclease NrnA/c-di-AMP phosphodiesterase DhhP, DHH superfamily	N/A
structural_annotation	UHGV-1356435_82	PF02272,MF_00207,TIGR00644,COG2404	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356435_83	PF14265	N/A	N/A	N/A	N/A
UniRef90	UHGV-1356435_84	UniRef90_A0A2H5YHT6	67.0	0.000000000000548	zf-trcl domain-containing protein	N/A
eggNOG-mapper	UHGV-1356435_84	1034347.CAHJ01000084_gene1346	59.3	0.00000000111	Probable zinc-ribbon domain	N/A
Pfam	UHGV-1356435_84	PF13451	N/A	N/A	Probable zinc-ribbon domain	zf-trcl
COG	UHGV-1356435_84	COG0514	N/A	N/A	Superfamily II DNA helicase RecQ	N/A
PHROG	UHGV-1356435_87	phrog_881	85.6	2.8e-25	holin	lysis
UniRef90	UHGV-1356435_87	UniRef90_A0A843HKU1	98.2	3.09e-25	Phage holin	N/A
eggNOG-mapper	UHGV-1356435_87	742740.HMPREF9474_02251	99.0	2.24e-26	Putative phage holin Dp-1	N/A
Pfam	UHGV-1356435_87	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1356435_87	PF16938	N/A	N/A	N/A	N/A
KOfam	UHGV-1356435_88	K01447	58.3	1.7e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1356435_88	phrog_7698	164.9	0	endolysin	lysis
UniRef90	UHGV-1356435_88	UniRef90_A0A2A7A552	216.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-1356435_88	742733.HMPREF9469_05022	182.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1356435_88	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1356435_88	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1356435_88	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1356435_88	PF01510,PF18342,PF08239,MF_04111,NF040670,NF008758,COG5632	N/A	N/A	N/A	N/A
Pfam	UHGV-1356435_93	PF13964	N/A	N/A	Kelch motif	Kelch_6
Pfam	UHGV-1356435_95	PF04647	N/A	N/A	Accessory gene regulator B	AgrB
structural_annotation	UHGV-1356435_95	PF08281	N/A	N/A	N/A	N/A
PHROG	UHGV-1356435_96	phrog_21718	41.1	0.000000000028	N/A	unknown function
eggNOG-mapper	UHGV-1356435_96	476272.RUMHYD_01952	59.7	0.00000000582	N/A	N/A
eggNOG-mapper	UHGV-1356435_97	658655.HMPREF0988_00918	61.6	0.0000000000109	N/A	N/A
PHROG	UHGV-1356435_98	phrog_16490	86.4	2.1e-36	N/A	unknown function
eggNOG-mapper	UHGV-1356435_98	476272.RUMHYD_01954	99.8	6.54e-22	N/A	N/A
UniRef90	UHGV-1356435_99	UniRef90_A0A316MV88	63.5	0.000000000706	BclA_C domain-containing protein	N/A
structural_annotation	UHGV-1356435_99	PF18573,NF033147	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1356435	Yes	67,838	35	100	1
UHGV-0185599	No	67,838	35	100	1