vOTU vOTU-006069

vOTU: vOTU-006069

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-006069
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00605 → vGENUS-00605 → vSUBGEN-24221 → vOTU-006069
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Metalachnospira → Metalachnospira sp900553995
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1360503
Biosample ID	N/A
Genome length (bp)	41,917 bps
CheckV completeness	100.00% (Complete)
CDS count	61
CDS density	92.63%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Metalachnospira → Metalachnospira sp900553995	Total connections	7	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1360503_4	phrog_2002	85.7	3.6e-25	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1360503_4	59241.E7DN89_BPDP1	82.0	2.54e-18	N/A	N/A
Pfam	UHGV-1360503_5	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-1360503_7	phrog_21026	59.5	7.2e-17	N/A	unknown function
PHROG	UHGV-1360503_8	phrog_2245	68.2	1.4e-19	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1360503_8	UniRef90_N9WF59	50.4	0.00000575	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-1360503_8	658655.HMPREF0988_00885	53.9	0.0000000442	N/A	N/A
PHROG	UHGV-1360503_9	phrog_474	100.9	2.1e-29	phosphofructokinase	other
UniRef90	UHGV-1360503_9	UniRef90_A0A2V2EHL9	110.0	1.05e-29	N/A	N/A
eggNOG-mapper	UHGV-1360503_9	1203606.HMPREF1526_00237	84.3	6.51e-20	N/A	N/A
Pfam	UHGV-1360503_9	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-1360503_9	PF19905	N/A	N/A	N/A	N/A
UniRef90	UHGV-1360503_10	UniRef90_K1SN71	50.8	0.000000677	HTH_30 domain-containing protein	N/A
COG	UHGV-1360503_10	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-1360503_10	PF13556,TIGR00637,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-1360503_11	phrog_36	60.5	3.8e-17	transcriptional regulator	transcription regulation
Pfam	UHGV-1360503_11	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-1360503_11	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1360503_11	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1360503_12	K19117	74.5	1.4e-21	csd1, cas8c; CRISPR-associated protein Csd1	N/A
UniRef90	UHGV-1360503_12	UniRef90_UPI001570630B	240.0	0	type I-C CRISPR-associated protein Cas8c/Csd1	N/A
eggNOG-mapper	UHGV-1360503_12	1460634.JCM19037_4279	81.6	0.00000000000000973	CRISPR-associated protein (Cas_Csd1)	N/A
PADLOC	UHGV-1360503_12	cd09757	87.2	2.6e-25	CAS-I-C; effector_LS	CRISPR-CAS
Pfam	UHGV-1360503_12	PF09709	N/A	N/A	CRISPR-associated protein (Cas_Csd1)	Cas_Csd1
COG	UHGV-1360503_12	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1360503_12	PF09709,TIGR01863	N/A	N/A	N/A	N/A
PHROG	UHGV-1360503_14	phrog_13890	45.2	0.0000000000012	N/A	unknown function
UniRef90	UHGV-1360503_14	UniRef90_UPI001C117B9F	73.2	0.00000000000000104	Arc family DNA-binding protein	N/A
eggNOG-mapper	UHGV-1360503_14	1160721.RBI_I00921	64.3	0.000000000000807	N/A	N/A
structural_annotation	UHGV-1360503_14	PF03869,NF010256	N/A	N/A	N/A	N/A
KOfam	UHGV-1360503_15	K07474	99.5	7e-29	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1360503_15	phrog_51	108.1	7.8e-32	terminase small subunit	head and packaging
UniRef90	UHGV-1360503_15	UniRef90_UPI00045EAA25	109.0	4.3e-27	terminase small subunit	N/A
eggNOG-mapper	UHGV-1360503_15	1298920.KI911353_gene4857	109.0	8.7e-28	Terminase small subunit	N/A
Pfam	UHGV-1360503_15	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1360503_15	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1360503_15	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1360503_16	K21523	53.1	3.3e-27	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-1360503_16	phrog_2	96.1	5.2e-28	terminase large subunit	head and packaging
UniRef90	UHGV-1360503_16	UniRef90_R5AHR8	598.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-1360503_16	693746.OBV_23980	513.0	0	phage Terminase large subunit	N/A
COG	UHGV-1360503_16	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-1360503_16	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1360503_17	phrog_156	243.5	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1360503_17	693746.OBV_23930	491.0	0	N/A	N/A
structural_annotation	UHGV-1360503_17	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1360503_19	693746.OBV_23910	60.5	0.000000139	N/A	N/A
PHROG	UHGV-1360503_20	phrog_24113	52.3	0.000000000000007	N/A	unknown function
structural_annotation	UHGV-1360503_20	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-1360503_21	phrog_371	135.9	2.2e-40	major head protein	head and packaging
UniRef90	UHGV-1360503_21	UniRef90_UPI001C11985C	493.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-1360503_21	1226322.HMPREF1545_03848	284.0	0	N/A	N/A
Pfam	UHGV-1360503_21	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-1360503_21	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1360503_22	phrog_13046	52.5	0.0000000000000078	N/A	unknown function
eggNOG-mapper	UHGV-1360503_22	693746.OBV_23880	129.0	1.72e-34	N/A	N/A
structural_annotation	UHGV-1360503_22	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1360503_23	665956.HMPREF1032_03917	514.0	0	N/A	N/A
structural_annotation	UHGV-1360503_23	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1360503_27	537013.CLOSTMETH_03776	81.3	0.000000000000148	N/A	N/A
eggNOG-mapper	UHGV-1360503_28	476272.RUMHYD_00002	90.5	7.27e-17	N/A	N/A
PHROG	UHGV-1360503_29	phrog_1863	76.7	1.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-1360503_29	748224.HMPREF9436_00408	109.0	1.3e-30	N/A	N/A
PHROG	UHGV-1360503_30	phrog_1129	65.0	9e-19	holin	lysis
UniRef90	UHGV-1360503_30	UniRef90_UPI001C1096AE	143.0	5.15678e-43	phage holin family protein	N/A
eggNOG-mapper	UHGV-1360503_30	702450.CUW_0551	105.0	7.11e-29	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1360503_30	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1360503_30	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1360503_31	K17733	113.6	1.8e-33	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-1360503_31	phrog_6523	131.3	8.6e-39	endolysin	lysis
UniRef90	UHGV-1360503_31	UniRef90_F2JNY6	171.0	0	Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin	N/A
eggNOG-mapper	UHGV-1360503_31	642492.Clole_1880	171.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-1360503_31	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-1360503_31	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-1360503_31	PF02557,MF_01924,NF000380,COG1876	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1360503_32	PF09486,NF038305	N/A	N/A	N/A	N/A
PHROG	UHGV-1360503_33	phrog_9854	130.6	9e-39	N/A	unknown function
eggNOG-mapper	UHGV-1360503_33	1121091.AUMP01000003_gene2597	273.0	0	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	N/A
Pfam	UHGV-1360503_33	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-1360503_33	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
Pfam	UHGV-1360503_34	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-1360503_34	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1360503_37	445972.ANACOL_01884	56.6	0.0000000129	N/A	N/A
KOfam	UHGV-1360503_38	K06400	258.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1360503_38	phrog_95	279.8	0	integrase	integration and excision
UniRef90	UHGV-1360503_38	UniRef90_U2RFE5	477.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-1360503_38	1256908.HMPREF0373_00206	477.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1360503_38	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1360503_38	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1360503_38	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1360503_38	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1360503_38	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
COG	UHGV-1360503_39	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
KOfam	UHGV-1360503_42	K18830	66.2	6.3e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1360503_42	phrog_8	53.5	0.0000000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-1360503_42	UniRef90_A0A6N7WRP8	148.0	7.14662e-44	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1360503_42	903814.ELI_1263	134.0	3.89e-39	Helix-turn-helix domain	N/A
Pfam	UHGV-1360503_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1360503_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1360503_42	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1360503_45	UniRef90_UPI00048E944E	50.1	0.000000934	N/A	N/A
eggNOG-mapper	UHGV-1360503_45	1378168.N510_00491	69.7	0.00000000000000241	N/A	N/A
structural_annotation	UHGV-1360503_45	PF03869,NF008671,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-1360503_53	phrog_11717	166.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1360503_53	1399942.U3PCT3_9CAUD	177.0	0	N/A	N/A
structural_annotation	UHGV-1360503_53	PF06420,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1360503_54	phrog_72	68.4	1e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360503_54	UniRef90_UPI000C7BF263	128.0	2.22e-34	recombination protein NinB	N/A
eggNOG-mapper	UHGV-1360503_54	445972.ANACOL_01825	117.0	1.51e-30	N/A	N/A
structural_annotation	UHGV-1360503_54	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1360503_55	phrog_7566	87.0	1.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-1360503_55	1443125.Z962_p0035	56.2	0.0000000101	endonuclease activity	N/A
COG	UHGV-1360503_55	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-1360503_56	K01160	66.2	9.3e-19	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1360503_56	phrog_140	130.9	7.2e-39	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360503_56	UniRef90_A0A136WJ13	145.0	3.21037e-42	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1360503_56	411470.RUMGNA_02196	95.9	1.39e-23	COG COG4570 Holliday junction resolvase	N/A
Pfam	UHGV-1360503_56	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1360503_56	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1360503_56	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1360503_57	phrog_15768	110.8	1.2e-32	N/A	unknown function
UniRef90	UHGV-1360503_57	UniRef90_A0A0J9CGG0	151.0	3.45e-41	N/A	N/A
eggNOG-mapper	UHGV-1360503_57	1121344.JHZO01000003_gene982	138.0	3.73e-37	N/A	N/A
AcrCatalog	UHGV-1360503_57	cluster_14472	144.0	5.32493e-44	NA	N/A
Pfam	UHGV-1360503_57	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1360503_57	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1360503_58	K02315	138.6	5.60001e-41	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1360503_58	phrog_50	134.4	9.2e-40	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360503_58	UniRef90_A0A1C6HFV4	181.0	0	DNA replication protein	N/A
eggNOG-mapper	UHGV-1360503_58	445972.ANACOL_01829	152.0	5.77335e-43	N/A	N/A
Pfam	UHGV-1360503_58	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1360503_58	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1360503_58	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-1360503_59	K03111	137.3	1.8e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1360503_59	phrog_44	140.2	1.29998e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360503_59	UniRef90_A0A2V2C1N3	217.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1360503_59	97138.C820_02339	185.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1360503_59	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1360503_59	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1360503_59	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1360503_59	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1360503_59	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1360503_61	phrog_14105	56.9	2.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-1360503_61	268407.PWYN_12330	65.5	0.000000000677	dextransucrase activity	N/A
COG	UHGV-1360503_61	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1360503	Yes	41,917	39	100	1
UHGV-0102053	No	41,755	39	100	1
UHGV-0383171	No	41,755	39	100	1