vOTU vOTU-006070

vOTU: vOTU-006070

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-006070
Number of genomes	5
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00089 → vSUBGEN-24706 → vOTU-006070
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1360505
Biosample ID	SAMN02334127
Genome length (bp)	41,828 bps
CheckV completeness	100.00% (Complete)
CDS count	59
CDS density	92.87%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	170	Host agreement	90
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	16	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1360505_2	K06909	152.2	4.2039e-45	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1360505_2	phrog_979	137.4	5.29971e-42	terminase large subunit	head and packaging
UniRef90	UHGV-1360505_2	UniRef90_A0A810Q5R0	647.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1360505_2	1410650.JHWL01000003_gene2834	613.0	0	N/A	N/A
Pfam	UHGV-1360505_2	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1360505_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1360505_2	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_3	phrog_511	233.1	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1360505_3	1410650.JHWL01000003_gene2827	320.0	0	N/A	N/A
structural_annotation	UHGV-1360505_3	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1360505_4	537007.BLAHAN_05255	60.8	0.000000424	N/A	N/A
PHROG	UHGV-1360505_5	phrog_37329	45.4	0.00000000000081	N/A	unknown function
Pfam	UHGV-1360505_5	PF00041	N/A	N/A	Fibronectin type III domain	fn3
COG	UHGV-1360505_5	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1360505_5	PF17744,PF16655,MF_01905,NF038116,COG3979,COG2033	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_7	phrog_156	290.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1360505_7	1410650.JHWL01000003_gene2833	543.0	0	N/A	N/A
structural_annotation	UHGV-1360505_7	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_8	phrog_13908	146.9	1.4013e-43	N/A	unknown function
eggNOG-mapper	UHGV-1360505_8	1410650.JHWL01000003_gene2831	105.0	1.34e-23	N/A	N/A
PHROG	UHGV-1360505_9	phrog_1357	213.2	0	major head protein	head and packaging
UniRef90	UHGV-1360505_9	UniRef90_A0A2V2CFL5	392.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1360505_9	1410650.JHWL01000003_gene2830	286.0	0	N/A	N/A
Pfam	UHGV-1360505_9	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1360505_9	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1360505_9	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_11	phrog_12105	122.8	1.8e-36	N/A	unknown function
eggNOG-mapper	UHGV-1360505_11	1226322.HMPREF1545_03850	61.2	0.000000000286	N/A	N/A
UniRef90	UHGV-1360505_12	UniRef90_R5DCX9	187.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1360505_12	1410650.JHWL01000003_gene2815	137.0	9.96e-34	N/A	N/A
eggNOG-mapper	UHGV-1360505_13	1408437.JNJN01000039_gene389	496.0	0	heme binding	N/A
COG	UHGV-1360505_13	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
PHROG	UHGV-1360505_14	phrog_33872	56.9	4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1360505_14	693746.OBV_19740	60.5	0.0000000000977	N/A	N/A
structural_annotation	UHGV-1360505_15	PF18962,NF011773	N/A	N/A	N/A	N/A
KOfam	UHGV-1360505_16	K19721	185.7	0	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-1360505_16	phrog_819	103.4	0	tail protein	tail
eggNOG-mapper	UHGV-1360505_16	1232443.BAIA02000078_gene14	85.1	0.0000000000000208	nuclear chromosome segregation	N/A
Pfam	UHGV-1360505_16	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1360505_16	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1360505_17	phrog_37900	53.9	2.9e-17	N/A	unknown function
UniRef90	UHGV-1360505_17	UniRef90_R5IRZ6	265.0	0	N/A	N/A
eggNOG-mapper	UHGV-1360505_17	1519439.JPJG01000060_gene1894	179.0	0	N/A	N/A
Pfam	UHGV-1360505_17	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1360505_17	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1360505_17	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_18	phrog_18725	43.6	0.0000000000054	N/A	unknown function
eggNOG-mapper	UHGV-1360505_18	693746.OBV_18220	77.0	9.07e-17	N/A	N/A
PHROG	UHGV-1360505_21	phrog_6918	95.2	4.3e-28	holin	lysis
UniRef90	UHGV-1360505_21	UniRef90_A0A316QCY7	102.0	3.48e-26	Holin	N/A
eggNOG-mapper	UHGV-1360505_21	1297617.JPJD01000020_gene301	100.0	2.43e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1360505_21	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1360505_21	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_22	phrog_14030	135.5	3.5e-40	N/A	unknown function
UniRef90	UHGV-1360505_22	UniRef90_R6LL81	233.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1360505_22	1121866.AUGK01000003_gene1444	96.3	4.22e-20	amidase activity	N/A
COG	UHGV-1360505_22	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
KOfam	UHGV-1360505_24	K19167	108.8	6.9e-32	abiQ; protein AbiQ	N/A
PHROG	UHGV-1360505_24	phrog_9764	114.9	6.4e-34	N/A	unknown function
UniRef90	UHGV-1360505_24	UniRef90_A0A845R8D8	216.0	0	Type III toxin-antitoxin system ToxN/AbiQ family toxin	N/A
eggNOG-mapper	UHGV-1360505_24	1519439.JPJG01000060_gene1906	178.0	0	Toxin ToxN, type III toxin-antitoxin system	N/A
PADLOC	UHGV-1360505_24	AbiQ	135.2	7e-40	AbiQ	Abi
Pfam	UHGV-1360505_24	PF13958	N/A	N/A	Toxin ToxN, type III toxin-antitoxin system	ToxN_toxin
structural_annotation	UHGV-1360505_24	PF13958	N/A	N/A	N/A	N/A
UniRef90	UHGV-1360505_27	UniRef90_A0A8F0WD75	79.3	0.00000000000000207	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1360505_27	1378168.N510_03079	70.5	0.00000000000212	N/A	N/A
KOfam	UHGV-1360505_28	K14059	205.2	0	int; integrase	N/A
PHROG	UHGV-1360505_28	phrog_1	196.9	0	integrase	integration and excision
UniRef90	UHGV-1360505_28	UniRef90_A0A212JT52	256.0	0	Putative Integrase family protein	N/A
eggNOG-mapper	UHGV-1360505_28	1507.HMPREF0262_00307	201.0	0	Phage integrase family	N/A
Pfam	UHGV-1360505_28	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1360505_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1360505_28	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1360505_28	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-1360505_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1360505_29	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1360505_31	K14623	363.1	0	dinD; DNA-damage-inducible protein D	N/A
PHROG	UHGV-1360505_31	phrog_8036	376.7	0	N/A	unknown function
UniRef90	UHGV-1360505_31	UniRef90_A0A1Y4LUW1	437.0	0	DNA damage-inducible protein D	N/A
eggNOG-mapper	UHGV-1360505_31	1514668.JOOA01000001_gene65	402.0	0	BRO family, N-terminal domain	N/A
AcrCatalog	UHGV-1360505_31	cluster_17589	159.0	0	NA	N/A
PADLOC	UHGV-1360505_31	Specificity_I_00032	353.3	0	Type I specificity subunit	RM
Pfam	UHGV-1360505_31	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
NCBIFam	UHGV-1360505_31	NF008573.0	N/A	N/A	DNA damage-inducible protein D	N/A
COG	UHGV-1360505_31	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-1360505_31	PF09669,NF008573,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-1360505_33	K22300	57.9	2.4e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1360505_33	phrog_8	50.6	0.000000000000044	transcriptional regulator	transcription regulation
UniRef90	UHGV-1360505_33	UniRef90_A0A844DFR0	116.0	4.2e-31	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1360505_33	748224.HMPREF9436_01444	112.0	3.16e-30	N/A	N/A
Pfam	UHGV-1360505_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1360505_33	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1360505_33	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1360505_35	UniRef90_UPI000951234C	67.8	0.000000000000101	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1360505_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1360505_35	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1360505_40	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1360505_43	NF041247	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_47	phrog_424	97.0	2.2e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1360505_47	UniRef90_A0A1Q6JI14	353.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-1360505_47	1410628.JNKS01000054_gene544	300.0	0	N/A	N/A
Pfam	UHGV-1360505_47	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1360505_47	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1360505_47	PF01507,MF_01161,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_48	phrog_3136	136.6	8.5e-41	N/A	unknown function
UniRef90	UHGV-1360505_48	UniRef90_A0A3D0HBD2	170.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1360505_48	717772.THIAE_09670	52.4	0.00000151	ASCH	N/A
Pfam	UHGV-1360505_48	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1360505_48	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1360505_48	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_49	phrog_38832	75.8	3.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1360505_49	1232443.BAIA02000078_gene48	112.0	4.29e-30	N/A	N/A
PHROG	UHGV-1360505_51	phrog_190	62.9	5.9e-18	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360505_51	UniRef90_UPI0006C2AC63	95.9	2.07e-23	N/A	N/A
eggNOG-mapper	UHGV-1360505_51	1226322.HMPREF1545_00295	87.4	1.05e-20	N/A	N/A
Pfam	UHGV-1360505_51	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1360505_51	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_53	phrog_374	57.1	4e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1360505_53	411467.BACCAP_02633	67.8	0.00000000000489	N/A	N/A
PHROG	UHGV-1360505_55	phrog_2245	88.8	5.7e-26	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1360505_55	UniRef90_A0A4U9RLZ8	64.7	0.000000000118	N/A	N/A
eggNOG-mapper	UHGV-1360505_55	706433.HMPREF9430_01279	65.5	0.0000000000122	N/A	N/A
structural_annotation	UHGV-1360505_55	PF08271	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_56	phrog_9467	175.6	0	N/A	unknown function
UniRef90	UHGV-1360505_56	UniRef90_UPI0015B3EAA7	136.0	2.78e-38	Gp49 family protein	N/A
eggNOG-mapper	UHGV-1360505_56	1519439.JPJG01000060_gene1880	181.0	0	N/A	N/A
Pfam	UHGV-1360505_56	PF13876	N/A	N/A	N/A	Phage_gp49_66
dbAPIS	UHGV-1360505_56	APIS043	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1360505_56	PF13876	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_57	phrog_3584	114.2	1.1e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1360505_57	537013.CLOSTMETH_02141	67.8	0.0000000000464	N/A	N/A
structural_annotation	UHGV-1360505_57	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-1360505_59	phrog_606	66.0	6.7e-19	terminase small subunit	head and packaging
UniRef90	UHGV-1360505_59	UniRef90_UPI001F487344	117.0	1.67e-31	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1360505_59	397290.C810_05185	112.0	3.07e-30	DNA-packaging protein gp3	N/A
Pfam	UHGV-1360505_59	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1360505	Yes	41,828	58	100	1
UHGV-1356813	No	41,828	58	100	1
UHGV-0135192	No	41,976	58	100	1
UHGV-0138898	No	41,912	58	100	1
UHGV-0133049	No	41,881	58	100	1