vOTU vOTU-006080

vOTU: vOTU-006080

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-006080
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00605 → vGENUS-00605 → vSUBGEN-21661 → vOTU-006080
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Metalachnospira → Metalachnospira sp900553995
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0028041
Biosample ID	N/A
Genome length (bp)	43,298 bps
CheckV completeness	100.00% (Complete)
CDS count	66
CDS density	93.24%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Metalachnospira → Metalachnospira sp900553995	Total connections	5	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0028041_1	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
structural_annotation	UHGV-0028041_2	PF09486,NF038305	N/A	N/A	N/A	N/A
KOfam	UHGV-0028041_3	K17733	117.2	1.4e-34	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-0028041_3	phrog_6523	132.5	3.6e-39	endolysin	lysis
UniRef90	UHGV-0028041_3	UniRef90_UPI001BED3A19	174.0	0	M15 family metallopeptidase	N/A
eggNOG-mapper	UHGV-0028041_3	642492.Clole_1880	169.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-0028041_3	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0028041_3	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-0028041_3	PF02557,MF_01924,NF000380,COG1876	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_4	phrog_1129	66.9	2.2e-19	holin	lysis
UniRef90	UHGV-0028041_4	UniRef90_UPI001C1096AE	142.0	2.10055e-42	phage holin family protein	N/A
eggNOG-mapper	UHGV-0028041_4	702450.CUW_0551	106.0	5.01e-29	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0028041_4	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0028041_4	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_5	phrog_1863	74.4	8e-22	N/A	unknown function
eggNOG-mapper	UHGV-0028041_5	748224.HMPREF9436_00408	107.0	1.52e-29	N/A	N/A
eggNOG-mapper	UHGV-0028041_6	476272.RUMHYD_00002	105.0	5.98e-23	N/A	N/A
eggNOG-mapper	UHGV-0028041_7	537013.CLOSTMETH_03776	82.4	0.0000000000000627	N/A	N/A
PHROG	UHGV-0028041_10	phrog_32680	40.0	2.4e-25	tail fiber protein	tail
eggNOG-mapper	UHGV-0028041_11	665956.HMPREF1032_03917	516.0	0	N/A	N/A
structural_annotation	UHGV-0028041_11	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_12	phrog_13046	52.7	0.0000000000000063	N/A	unknown function
eggNOG-mapper	UHGV-0028041_12	693746.OBV_23880	129.0	1.72e-34	N/A	N/A
structural_annotation	UHGV-0028041_12	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_13	phrog_371	136.4	1.50001e-40	major head protein	head and packaging
UniRef90	UHGV-0028041_13	UniRef90_UPI001C11985C	492.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-0028041_13	1226322.HMPREF1545_03848	284.0	0	N/A	N/A
Pfam	UHGV-0028041_13	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0028041_13	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_14	phrog_24113	54.1	0.0000000000000019	N/A	unknown function
structural_annotation	UHGV-0028041_14	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_15	phrog_35275	43.5	0.0000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0028041_15	1226322.HMPREF1545_03846	58.5	0.000000659	N/A	N/A
PHROG	UHGV-0028041_17	phrog_156	243.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0028041_17	693746.OBV_23930	492.0	0	N/A	N/A
structural_annotation	UHGV-0028041_17	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0028041_18	K21523	55.4	1.5e-27	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0028041_18	phrog_2	94.6	1.5e-27	terminase large subunit	head and packaging
UniRef90	UHGV-0028041_18	UniRef90_R5AHR8	602.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0028041_18	693746.OBV_23980	515.0	0	phage Terminase large subunit	N/A
COG	UHGV-0028041_18	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0028041_18	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
KOfam	UHGV-0028041_19	K07474	96.0	8.1e-28	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0028041_19	phrog_51	106.5	2.6e-31	terminase small subunit	head and packaging
UniRef90	UHGV-0028041_19	UniRef90_A0A329UVE7	103.0	1.67e-24	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0028041_19	1298920.KI911353_gene4857	101.0	1.21e-24	Terminase small subunit	N/A
Pfam	UHGV-0028041_19	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0028041_19	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0028041_19	PF03592,COG3728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028041_20	PF03869,NF010256	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_22	phrog_15863	172.6	0	N/A	unknown function
UniRef90	UHGV-0028041_22	UniRef90_G4KRA6	156.0	1.4013e-45	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0028041_22	693746.OBV_01780	156.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0028041_22	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
PHROG	UHGV-0028041_23	phrog_6244	48.3	0.00000000000023	N/A	unknown function
eggNOG-mapper	UHGV-0028041_23	1507.HMPREF0262_00296	86.3	6.58e-21	N/A	N/A
structural_annotation	UHGV-0028041_24	PF17917	N/A	N/A	N/A	N/A
KOfam	UHGV-0028041_27	K19117	76.7	2.8e-22	csd1, cas8c; CRISPR-associated protein Csd1	N/A
UniRef90	UHGV-0028041_27	UniRef90_UPI001570630B	233.0	0	type I-C CRISPR-associated protein Cas8c/Csd1	N/A
eggNOG-mapper	UHGV-0028041_27	1460634.JCM19037_4279	81.3	0.0000000000000132	CRISPR-associated protein (Cas_Csd1)	N/A
PADLOC	UHGV-0028041_27	cd09757	87.6	2.1e-25	CAS-I-C; effector_LS	CRISPR-CAS
Pfam	UHGV-0028041_27	PF09709	N/A	N/A	CRISPR-associated protein (Cas_Csd1)	Cas_Csd1
COG	UHGV-0028041_27	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0028041_27	PF09709,TIGR01863	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_28	phrog_36	61.1	2.3e-17	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0028041_28	879310.HMPREF9162_0063	50.1	0.00000841	sigma factor activity	N/A
Pfam	UHGV-0028041_28	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0028041_28	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0028041_28	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0028041_29	UniRef90_K1SN71	48.9	0.00000389	HTH_30 domain-containing protein	N/A
COG	UHGV-0028041_29	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-0028041_29	PF13556,TIGR00637,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_30	phrog_474	103.3	3.7e-30	phosphofructokinase	other
UniRef90	UHGV-0028041_30	UniRef90_A0A2V2EHL9	108.0	6.04e-29	N/A	N/A
eggNOG-mapper	UHGV-0028041_30	1123247.AUIJ01000002_gene2234	81.6	5.73e-19	N/A	N/A
Pfam	UHGV-0028041_30	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0028041_30	PF19905	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_31	phrog_2245	67.5	2.2e-19	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-0028041_31	658655.HMPREF0988_00885	52.8	0.000000125	N/A	N/A
PHROG	UHGV-0028041_32	phrog_6721	241.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0028041_32	411473.RUMCAL_00916	219.0	0	N/A	N/A
structural_annotation	UHGV-0028041_32	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_34	phrog_21026	48.0	0.00000000000023	N/A	unknown function
PHROG	UHGV-0028041_36	phrog_14105	50.3	2.5e-16	N/A	unknown function
COG	UHGV-0028041_36	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
KOfam	UHGV-0028041_38	K03111	140.2	2.20004e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0028041_38	phrog_44	142.0	3.39955e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028041_38	UniRef90_A0A2V2C1N3	220.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0028041_38	97138.C820_02339	189.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0028041_38	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0028041_38	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0028041_38	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0028041_38	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0028041_38	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_39	phrog_9804	154.3	0	N/A	unknown function
UniRef90	UHGV-0028041_39	UniRef90_A7GI97	154.0	1.82169e-44	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0028041_39	1291050.JAGE01000002_gene3261	140.0	1.14e-39	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-0028041_39	cluster_137185	37.7	0.0000228	NA	N/A
Pfam	UHGV-0028041_39	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0028041_39	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_40	phrog_10469	113.3	1.8e-33	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028041_40	UniRef90_A0A350TWM2	152.0	2.06005e-41	N/A	N/A
eggNOG-mapper	UHGV-0028041_40	97138.C820_00775	147.0	4.87999e-40	DnaD domain protein	N/A
Pfam	UHGV-0028041_40	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0028041_40	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-0028041_41	K01160	71.1	2.8e-20	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0028041_41	phrog_140	141.5	3.80032e-42	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028041_41	UniRef90_A0A136WJ13	146.0	8.53391e-43	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0028041_41	588581.Cpap_1486	113.0	4.38e-30	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0028041_41	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0028041_41	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0028041_41	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_42	phrog_7566	85.6	3.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-0028041_42	1443125.Z962_p0035	54.7	0.00000004	endonuclease activity	N/A
COG	UHGV-0028041_42	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0028041_43	phrog_72	65.3	8.4e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028041_43	UniRef90_UPI000C7BF263	128.0	3.14e-34	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0028041_43	445972.ANACOL_01825	117.0	1.07e-30	N/A	N/A
structural_annotation	UHGV-0028041_43	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_44	phrog_11717	173.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0028041_44	508419.F8J181_9CAUD	186.0	0	N/A	N/A
structural_annotation	UHGV-0028041_44	PF06420,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028041_51	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0028041_52	411461.DORFOR_00023	58.2	0.00000000015	N/A	N/A
KOfam	UHGV-0028041_58	K18830	66.9	4e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0028041_58	phrog_8	56.5	1.4e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0028041_58	UniRef90_UPI001899F946	134.0	2.27e-38	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0028041_58	397290.C810_05152	113.0	8.08e-31	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0028041_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0028041_58	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0028041_58	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0028041_61	K14059	156.5	0	int; integrase	N/A
PHROG	UHGV-0028041_61	phrog_1	167.6	0	integrase	integration and excision
UniRef90	UHGV-0028041_61	UniRef90_UPI001C109D33	461.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0028041_61	1462527.CCDM010000010_gene473	303.0	0	Phage integrase family	N/A
Pfam	UHGV-0028041_61	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0028041_61	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0028041_61	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0028041_62	445972.ANACOL_01884	55.8	0.0000000256	N/A	N/A
Pfam	UHGV-0028041_65	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0028041_65	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0028041_66	phrog_22978	137.0	6.20005e-41	N/A	unknown function
UniRef90	UHGV-0028041_66	UniRef90_A0A352SFR2	255.0	0	MuF_C domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0028041_66	693746.OBV_23800	201.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0028041	Yes	43,298	38	100	1
UHGV-0029598	No	43,298	38	100	1
UHGV-0021738	No	43,388	38	100	1
UHGV-0025001	No	43,278	38	100	1
UHGV-0032432	No	43,242	38	100	1