vOTU vOTU-006144

vOTU: vOTU-006144

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-006144
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00150 → vSUBFAM-00515 → vGENUS-01854 → vSUBGEN-05992 → vOTU-006144
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Ventricola
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1997948
Biosample ID	N/A
Genome length (bp)	44,359 bps
CheckV completeness	100.00% (Complete)
CDS count	67
CDS density	92.24%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Ventricola	Total connections	55	Host agreement	89.09
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Ventricola → Ventricola sp900548125	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1997948_1	phrog_4433	111.2	1.29998e-41	N/A	unknown function
eggNOG-mapper	UHGV-1997948_1	665950.HMPREF1025_01373	125.0	7.94e-32	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1997948_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1997948_1	NF007410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1997948_2	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1997948_5	PF20800	N/A	N/A	N/A	N/A
PHROG	UHGV-1997948_8	phrog_21649	134.7	6.89999e-40	N/A	unknown function
UniRef90	UHGV-1997948_8	UniRef90_UPI0006B5ECE1	196.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1997948_8	357809.Cphy_2988	191.0	0	ERF superfamily	N/A
Pfam	UHGV-1997948_8	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-1997948_8	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1997948_8	PF04404,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-1997948_9	K03111	129.1	5.4e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1997948_9	phrog_44	127.3	1.2e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1997948_9	UniRef90_A0A1Q6Q4S4	140.0	2.72e-40	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1997948_9	1340493.JNIF01000004_gene1155	92.4	3.39e-22	single-stranded DNA binding	N/A
Pfam	UHGV-1997948_9	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1997948_9	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1997948_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1997948_9	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1997948_9	PF00436,MF_00984,NF005406,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1997948_10	phrog_15768	144.4	3.50325e-43	N/A	unknown function
UniRef90	UHGV-1997948_10	UniRef90_UPI00189C2664	146.0	1.68999e-40	N/A	N/A
eggNOG-mapper	UHGV-1997948_10	642492.Clole_0946	95.5	2.45e-21	DnaD domain protein	N/A
AcrCatalog	UHGV-1997948_10	cluster_38323	103.0	3.34e-29	NA	N/A
Pfam	UHGV-1997948_10	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1997948_10	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1997948_10	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1997948_11	phrog_9804	148.1	4.34403e-44	N/A	unknown function
UniRef90	UHGV-1997948_11	UniRef90_UPI0015C5D332	162.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-1997948_11	1121344.JHZO01000003_gene981	149.0	2.20004e-42	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1997948_11	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1997948_11	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1997948_13	phrog_3301	40.8	0.000000000014	pyrophosphatase	other
UniRef90	UHGV-1997948_13	UniRef90_UPI00054386A4	68.6	0.000000000002	nucleotide pyrophosphohydrolase	N/A
eggNOG-mapper	UHGV-1997948_13	743719.PaelaDRAFT_2380	54.7	0.0000000836	Mazg nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-1997948_13	PF04447	N/A	N/A	dATP/dGTP pyrophosphohydrolase	dATP-dGTP_PPHyd
COG	UHGV-1997948_13	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1997948_13	COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-1997948_14	phrog_757	182.8	0	DNA methyltransferase	other
UniRef90	UHGV-1997948_14	UniRef90_A0A355KVL2	345.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1997948_14	748224.HMPREF9436_03069	385.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1997948_14	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1997948_14	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-1997948_16	UniRef90_A0A355YQJ9	50.4	0.00000701	zinc_ribbon_2 domain-containing protein	N/A
structural_annotation	UHGV-1997948_19	TIGR03655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1997948_22	UniRef90_A0A832L5E4	85.9	3.11e-17	Crossover junction endodeoxyribonuclease RuvC	N/A
eggNOG-mapper	UHGV-1997948_22	1304885.AUEY01000070_gene1852	84.7	1.57e-17	N/A	N/A
structural_annotation	UHGV-1997948_23	PF07374,TIGR01636	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1997948_26	469378.Ccur_03010	124.0	3.17e-35	N/A	N/A
PHROG	UHGV-1997948_30	phrog_15863	150.8	4.2039e-45	N/A	unknown function
UniRef90	UHGV-1997948_30	UniRef90_A0A1U7M9V5	143.0	1.73e-40	Chaperone protein DnaJ	N/A
eggNOG-mapper	UHGV-1997948_30	471855.Shel_20200	134.0	8.51e-38	Heat shock protein DnaJ domain protein	N/A
COG	UHGV-1997948_30	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-1997948_32	PF03869,NF010256,COG4877	N/A	N/A	N/A	N/A
Pfam	UHGV-1997948_33	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
structural_annotation	UHGV-1997948_33	PF02796,TIGR02844	N/A	N/A	N/A	N/A
KOfam	UHGV-1997948_34	K06909	123.5	2e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1997948_34	phrog_979	144.3	3.36312e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1997948_34	UniRef90_UPI0004130EC4	462.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1997948_34	1121091.AUMP01000003_gene2581	462.0	0	Terminase-like family	N/A
Pfam	UHGV-1997948_34	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1997948_34	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1997948_34	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1997948_35	phrog_156	209.7	0	portal protein	head and packaging
UniRef90	UHGV-1997948_35	UniRef90_A0A2K9P4K6	134.0	1.05e-29	Sigma-70 region 2	N/A
eggNOG-mapper	UHGV-1997948_35	935837.JAEK01000054_gene1466	80.9	0.000000000000451	N/A	N/A
structural_annotation	UHGV-1997948_35	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1997948_37	phrog_1357	232.4	0	major head protein	head and packaging
UniRef90	UHGV-1997948_37	UniRef90_A0A316LK11	241.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1997948_37	935837.JAEK01000054_gene1469	236.0	0	N/A	N/A
Pfam	UHGV-1997948_37	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1997948_37	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1997948_37	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1997948_39	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-1997948_40	phrog_511	62.8	3.6e-18	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1997948_40	1449126.JQKL01000046_gene2081	58.9	0.00000333	N/A	N/A
COG	UHGV-1997948_40	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1997948_40	PF11134,MF_03022,NF010237,TIGR04362,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1997948_42	PF08703,TIGR04319,COG3524	N/A	N/A	N/A	N/A
KOfam	UHGV-1997948_43	K06240	41.4	0.0000000000035	LAMA3_5; laminin, alpha 3/5	N/A
eggNOG-mapper	UHGV-1997948_43	268407.PWYN_12490	221.0	0	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	N/A
Pfam	UHGV-1997948_43	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-1997948_43	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
Pfam	UHGV-1997948_45	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-1997948_45	PF21722	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1997948_46	PF16640,NF032891	N/A	N/A	N/A	N/A
NCBIFam	UHGV-1997948_49	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-1997948_49	NF040910	N/A	N/A	N/A	N/A
UniRef90	UHGV-1997948_51	UniRef90_A0A2V2FP98	214.0	0	SH3b domain-containing protein	N/A
Pfam	UHGV-1997948_51	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1997948_51	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1997948_51	PF08239,PF00877,NF008096,NF041850,COG4991,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1997948_52	phrog_199	88.9	5.1e-26	holin	lysis
UniRef90	UHGV-1997948_52	UniRef90_K1UL76	131.0	2.85e-36	Holin, toxin secretion/phage lysis	N/A
eggNOG-mapper	UHGV-1997948_52	411467.BACCAP_00280	122.0	1.33e-33	Bacteriophage holin family	N/A
Pfam	UHGV-1997948_52	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1997948_52	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1997948_52	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1997948_52	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1997948_53	PF08281,TIGR02983	N/A	N/A	N/A	N/A
PHROG	UHGV-1997948_54	phrog_3754	94.4	1.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-1997948_54	476272.RUMHYD_01764	167.0	0	N/A	N/A
PHROG	UHGV-1997948_55	phrog_21718	112.8	2.7e-33	N/A	unknown function
eggNOG-mapper	UHGV-1997948_55	397290.C810_05210	102.0	2.32e-25	N/A	N/A
PHROG	UHGV-1997948_56	phrog_22984	72.1	5.6e-21	N/A	unknown function
PHROG	UHGV-1997948_57	phrog_16490	154.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1997948_57	1408437.JNJN01000043_gene803	146.0	1.95e-40	N/A	N/A
PHROG	UHGV-1997948_58	phrog_20016	193.0	0	N/A	unknown function
UniRef90	UHGV-1997948_58	UniRef90_A0A285PT46	191.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1997948_58	397290.C810_05214	167.0	0	N/A	N/A
structural_annotation	UHGV-1997948_58	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1997948_59	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-1997948_60	K14059	195.8	0	int; integrase	N/A
PHROG	UHGV-1997948_60	phrog_1	173.5	0	integrase	integration and excision
UniRef90	UHGV-1997948_60	UniRef90_A0A353J242	183.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1997948_60	246199.CUS_5913	141.0	3.91e-36	Phage integrase family	N/A
Pfam	UHGV-1997948_60	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1997948_60	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1997948_60	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1997948_63	K22300	55.9	9.9e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1997948_63	phrog_4	43.5	0.0000000000073	transcriptional repressor	transcription regulation
UniRef90	UHGV-1997948_63	UniRef90_A0A1C6CFH8	86.7	1.29e-19	Putative zinc finger/helix-turn-helix protein, YgiT family	N/A
eggNOG-mapper	UHGV-1997948_63	397290.C810_01441	53.5	0.000000168	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1997948_63	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1997948_63	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1997948_63	PF12844,MF_00535,NF007257,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-1997948_64	UniRef90_N2AZL4	50.4	0.00000267	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1997948_64	97139.C824_00056	50.4	0.000000448	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1997948_64	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1997948_64	PF08667,MF_00535,NF010465,COG1396	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1997948	Yes	44,359	57	100	1
UHGV-1979104	No	44,359	57	100	1