vOTU vOTU-006181

vOTU: vOTU-006181

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-006181
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-00214 → vSUBGEN-13742 → vOTU-006181
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1374034
Biosample ID	N/A
Genome length (bp)	37,123 bps
CheckV completeness	100.00% (Complete)
CDS count	70
CDS density	93.82%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	646	Host agreement	94.74
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	16	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1374034_3	PF08271	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_4	phrog_3584	113.2	2.1e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1374034_4	537013.CLOSTMETH_02141	68.2	0.0000000000335	N/A	N/A
structural_annotation	UHGV-1374034_4	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1374034_5	1297617.JPJD01000059_gene2640	77.0	3.61e-16	N/A	N/A
structural_annotation	UHGV-1374034_5	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_6	phrog_119	49.3	0.000000000000064	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1374034_6	UniRef90_A0A174XSZ8	125.0	2.91e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1374034_6	1235793.C809_01915	117.0	4.02e-32	HNH endonuclease	N/A
Pfam	UHGV-1374034_6	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1374034_6	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1374034_7	phrog_1066	130.6	5.5e-39	N/A	unknown function
eggNOG-mapper	UHGV-1374034_7	1382358.JHVN01000024_gene1703	124.0	4.78e-35	N/A	N/A
structural_annotation	UHGV-1374034_7	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_8	phrog_9	374.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1374034_8	UniRef90_A0A1Y3W5R1	780.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1374034_8	1203606.HMPREF1526_00981	725.0	0	Terminase	N/A
Pfam	UHGV-1374034_8	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1374034_8	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1374034_8	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1374034_8	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_9	phrog_12	177.9	0	portal protein	head and packaging
UniRef90	UHGV-1374034_9	UniRef90_R8W4B0	498.0	0	HK97 family phage portal protein	N/A
eggNOG-mapper	UHGV-1374034_9	1203606.HMPREF1526_00980	498.0	0	Portal protein	N/A
Pfam	UHGV-1374034_9	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1374034_9	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1374034_9	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1374034_10	K01358	132.9	3.3e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1374034_10	phrog_94	201.9	0	head maturation protease	head and packaging
UniRef90	UHGV-1374034_10	UniRef90_UPI0018979DC8	204.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1374034_10	1280689.AUJC01000011_gene1520	184.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1374034_10	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1374034_10	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1374034_10	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_11	phrog_10	182.9	0	major head protein	head and packaging
UniRef90	UHGV-1374034_11	UniRef90_UPI00189AE5FE	402.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1374034_11	1280689.AUJC01000011_gene1521	390.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1374034_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1374034_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1374034_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1374034_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_12	phrog_5223	45.9	0.00000000000074	neck protein	connector
UniRef90	UHGV-1374034_12	UniRef90_B6W9Y5	62.4	0.000000000128	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-1374034_12	561177.ANHYDRO_01411	62.4	0.0000000000215	N/A	N/A
PHROG	UHGV-1374034_13	phrog_1951	76.7	2e-22	head-tail adaptor	connector
UniRef90	UHGV-1374034_13	UniRef90_UPI001B02B074	64.7	0.0000000000183	phage head closure protein	N/A
eggNOG-mapper	UHGV-1374034_13	1094508.Tsac_2422	53.5	0.0000000802	Phage head-tail joining protein	N/A
Pfam	UHGV-1374034_13	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1374034_13	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1374034_13	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1374034_13	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1374034_14	1487921.DP68_11350	61.6	0.0000000000701	N/A	N/A
structural_annotation	UHGV-1374034_14	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_15	phrog_5	44.9	0.0000000000027	tail completion or Neck1 protein	connector
structural_annotation	UHGV-1374034_15	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_16	phrog_88	82.9	4.1e-24	major tail protein	tail
UniRef90	UHGV-1374034_16	UniRef90_S0FUN2	113.0	2.65e-28	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1374034_16	1195236.CTER_5106	113.0	4.44e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1374034_16	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1374034_16	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374034_16	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374034_17	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_18	phrog_33680	151.2	4.2039e-45	N/A	unknown function
UniRef90	UHGV-1374034_18	UniRef90_A0A1M6L1P7	256.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1374034_18	1195236.CTER_5104	252.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1374034_18	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1374034_18	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_19	phrog_37549	83.1	1.5e-28	virion structural protein	head and packaging
UniRef90	UHGV-1374034_19	UniRef90_A0A3D0W045	217.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1374034_19	1195236.CTER_5103	127.0	9.86e-28	N/A	N/A
structural_annotation	UHGV-1374034_19	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_20	phrog_26795	127.4	4.9e-38	N/A	unknown function
UniRef90	UHGV-1374034_20	UniRef90_A0A5J6T4K8	137.0	2.18e-33	Minor tail protein	N/A
eggNOG-mapper	UHGV-1374034_20	1195236.CTER_5102	134.0	3.49e-33	N/A	N/A
structural_annotation	UHGV-1374034_20	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374034_21	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374034_22	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_24	phrog_10898	280.2	0	N/A	unknown function
UniRef90	UHGV-1374034_24	UniRef90_A0A7U3NJT3	187.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1374034_24	717606.PaecuDRAFT_2136	75.1	0.000000000000891	S-layer homology domain	N/A
COG	UHGV-1374034_24	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-1374034_24	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_25	phrog_10898	41.3	0.000000000024	N/A	unknown function
structural_annotation	UHGV-1374034_25	PF16408,NF033510	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_27	phrog_18805	44.3	0.0000000000003	N/A	unknown function
eggNOG-mapper	UHGV-1374034_27	888059.HMPREF9071_1919	57.0	0.0000021	Bacterial group 2 Ig-like protein	N/A
Pfam	UHGV-1374034_27	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-1374034_27	COG4964	N/A	N/A	Flp pilus assembly protein, secretin CpaC	N/A
structural_annotation	UHGV-1374034_27	PF13306	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374034_29	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_33	phrog_6918	97.7	7.1e-29	holin	lysis
UniRef90	UHGV-1374034_33	UniRef90_A0A316QCY7	102.0	4.93e-26	Holin	N/A
eggNOG-mapper	UHGV-1374034_33	1297617.JPJD01000020_gene301	100.0	3.45e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1374034_33	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1374034_33	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_34	phrog_14030	140.8	8.39938e-42	N/A	unknown function
UniRef90	UHGV-1374034_34	UniRef90_R6LL81	245.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1374034_34	1121866.AUGK01000003_gene1444	98.6	6.46e-21	amidase activity	N/A
COG	UHGV-1374034_34	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
UniRef90	UHGV-1374034_37	UniRef90_A0A7M1RS47	65.9	0.000000000111	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1374034_37	1378168.N510_03079	68.9	0.00000000000757	N/A	N/A
KOfam	UHGV-1374034_38	K06400	378.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1374034_38	phrog_95	367.6	0	integrase	integration and excision
UniRef90	UHGV-1374034_38	UniRef90_UPI00189960B8	501.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1374034_38	1235835.C814_00825	415.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1374034_38	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1374034_38	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1374034_38	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1374034_38	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1374034_38	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-1374034_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1374034_39	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_40	phrog_10292	81.3	7.3e-24	N/A	unknown function
UniRef90	UHGV-1374034_40	UniRef90_A0A416W984	103.0	1.23e-25	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1374034_40	1519439.JPJG01000059_gene1953	82.0	1.61e-17	TM2 domain	N/A
Pfam	UHGV-1374034_40	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1374034_40	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1374034_40	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1374034_42	K22300	53.0	0.0000000000000077	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1374034_42	phrog_4	49.7	0.00000000000009	transcriptional repressor	transcription regulation
UniRef90	UHGV-1374034_42	UniRef90_A0A2U1BEG8	120.0	1.34e-32	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1374034_42	1235797.C816_03553	110.0	9.07e-29	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1374034_42	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1374034_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1374034_42	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1374034_45	642492.Clole_0961	70.9	0.00000000000000265	N/A	N/A
structural_annotation	UHGV-1374034_45	PF12286	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_46	phrog_478	134.6	3.3e-40	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1374034_46	UniRef90_A0A373Q857	164.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1374034_46	1111121.HMPREF1247_0834	100.0	2.54e-25	N/A	N/A
structural_annotation	UHGV-1374034_48	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374034_51	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374034_52	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-1374034_56	K00558	159.7	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1374034_56	phrog_363	243.9	0	DNA methyltransferase	other
UniRef90	UHGV-1374034_56	UniRef90_G4KRB8	338.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1374034_56	693746.OBV_01900	338.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1374034_56	MTase_II_00058	121.1	9.8e-36	Type II methyltransferase	RM
Pfam	UHGV-1374034_56	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1374034_56	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1374034_56	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1374034_56	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1374034_57	K00390	104.2	1.2e-30	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1374034_57	phrog_424	117.6	7e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1374034_57	UniRef90_UPI001D087498	426.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1374034_57	1408437.JNJN01000032_gene2312	335.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1374034_57	BrxP_00001	62.9	6.8e-19	BrxP	BREX
Pfam	UHGV-1374034_57	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1374034_57	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1374034_57	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
Pfam	UHGV-1374034_58	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1374034_59	phrog_1384	120.7	1.1e-35	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-1374034_59	665956.HMPREF1032_03086	283.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-1374034_59	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_60	phrog_3136	131.0	4.5e-39	N/A	unknown function
UniRef90	UHGV-1374034_60	UniRef90_A0A3D0HBD2	115.0	7.72e-30	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1374034_60	1235793.C809_02645	71.2	0.000000000000846	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-1374034_60	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1374034_60	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1374034_60	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1374034_61	phrog_38832	73.8	1e-21	N/A	unknown function
eggNOG-mapper	UHGV-1374034_61	1232443.BAIA02000078_gene48	109.0	1.46e-28	N/A	N/A
PHROG	UHGV-1374034_65	phrog_190	97.5	1.4e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1374034_65	UniRef90_UPI0006C2AC63	122.0	8.06e-33	N/A	N/A
eggNOG-mapper	UHGV-1374034_65	693746.OBV_25250	116.0	5.29e-31	N/A	N/A
Pfam	UHGV-1374034_65	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1374034_65	PF06356	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374034_67	PF10013	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1374034	Yes	37,123	58	100	1
UHGV-0142888	No	37,123	58	100	1