vOTU vOTU-006342

vOTU: vOTU-006342

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-006342
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-00184 → vGENUS-00321 → vSUBGEN-26442 → vOTU-006342
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp900549635
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0171638
Biosample ID	SAMN09781787
Genome length (bp)	40,940 bps
CheckV completeness	100.00% (Complete)
CDS count	60
CDS density	90.42%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp900549635	Total connections	24	Host agreement	70.83
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0171638_1	1160721.RBI_I00206	52.0	0.000000263	N/A	N/A
KOfam	UHGV-0171638_4	K06909	141.0	1.10002e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0171638_4	phrog_979	122.6	7.3e-38	terminase large subunit	head and packaging
UniRef90	UHGV-0171638_4	UniRef90_G4KR97	539.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0171638_4	693746.OBV_01690	539.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0171638_4	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0171638_4	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0171638_4	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0171638_5	693746.OBV_01730	74.3	0.00000000000000399	N/A	N/A
structural_annotation	UHGV-0171638_5	PF11650	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_6	phrog_14606	46.7	0.00000000000035	N/A	unknown function
eggNOG-mapper	UHGV-0171638_6	755731.Clo1100_2435	67.0	0.000000000662	N/A	N/A
PHROG	UHGV-0171638_7	phrog_422	154.1	1.4013e-45	major head protein	head and packaging
UniRef90	UHGV-0171638_7	UniRef90_A0A6A8VJ17	330.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0171638_7	1408437.JNJN01000001_gene1710	241.0	0	N/A	N/A
Pfam	UHGV-0171638_7	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0171638_7	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171638_8	UniRef90_A0A4D7ASB8	514.0	0	N/A	N/A
eggNOG-mapper	UHGV-0171638_8	693746.OBV_01680	504.0	0	N/A	N/A
structural_annotation	UHGV-0171638_8	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_10	phrog_156	136.4	1.3e-40	portal protein	head and packaging
eggNOG-mapper	UHGV-0171638_10	693746.OBV_01670	599.0	0	N/A	N/A
structural_annotation	UHGV-0171638_10	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0171638_11	411473.RUMCAL_00420	63.5	0.0000000305	nuclear chromosome segregation	N/A
COG	UHGV-0171638_11	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
UniRef90	UHGV-0171638_12	UniRef90_UPI00051B4A1C	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0171638_12	1519439.JPJG01000060_gene1894	176.0	0	N/A	N/A
Pfam	UHGV-0171638_12	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0171638_12	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0171638_12	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0171638_14	1235797.C816_04174	141.0	3.53e-40	N/A	N/A
eggNOG-mapper	UHGV-0171638_15	693746.OBV_01600	89.7	1.2e-16	N/A	N/A
UniRef90	UHGV-0171638_16	UniRef90_A0A810QFN4	365.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0171638_16	1408437.JNJN01000060_gene452	383.0	0	heme binding	N/A
Pfam	UHGV-0171638_16	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
COG	UHGV-0171638_16	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
PHROG	UHGV-0171638_17	phrog_937	58.8	1.1e-16	hemolysin	other
eggNOG-mapper	UHGV-0171638_17	1519439.JPJG01000023_gene533	49.3	0.00000291	N/A	N/A
PHROG	UHGV-0171638_18	phrog_443	61.8	1.9e-17	holin	lysis
UniRef90	UHGV-0171638_18	UniRef90_UPI0009B98E42	94.0	5.84e-24	holin	N/A
eggNOG-mapper	UHGV-0171638_18	1235797.C816_04172	89.4	6.29e-23	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0171638_18	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0171638_18	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_19	phrog_14030	143.0	1.80067e-42	N/A	unknown function
UniRef90	UHGV-0171638_19	UniRef90_UPI00164AB959	156.0	4.48416e-43	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0171638_19	887325.HMPREF0381_0057	147.0	1.96e-40	Putative cell wall binding repeat	N/A
COG	UHGV-0171638_19	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-0171638_20	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0171638_23	1378168.N510_03079	62.4	0.00000000165	N/A	N/A
KOfam	UHGV-0171638_24	K14059	153.6	2.8026e-45	int; integrase	N/A
PHROG	UHGV-0171638_24	phrog_1	148.5	5.60519e-44	integrase	integration and excision
UniRef90	UHGV-0171638_24	UniRef90_A0A3D2HVQ9	288.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0171638_24	411467.BACCAP_00889	80.5	0.0000000000000508	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0171638_24	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0171638_24	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0171638_24	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0171638_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0171638_25	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171638_27	UniRef90_A0A329UR16	67.0	0.00000000000686	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0171638_27	NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0171638_29	K22300	52.9	0.0000000000000078	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0171638_29	phrog_3	44.4	0.0000000000065	transcriptional repressor	transcription regulation
UniRef90	UHGV-0171638_29	UniRef90_A0A3D3Y6C1	63.2	0.0000000000107	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0171638_29	575605.ACQN01000023_gene710	54.7	0.0000000216	Helix-turn-helix domain	N/A
Pfam	UHGV-0171638_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0171638_29	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0171638_29	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0171638_30	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_31	phrog_1468	52.1	0.0000000000000066	transcriptional repressor	transcription regulation
UniRef90	UHGV-0171638_31	UniRef90_A0A3Q0NDY7	48.1	0.00000879	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0171638_31	386043.lwe1198	46.6	0.00000596	Helix-turn-helix	N/A
Pfam	UHGV-0171638_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0171638_31	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0171638_32	760568.Desku_0919	108.0	1.19e-26	N/A	N/A
structural_annotation	UHGV-0171638_32	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
Pfam	UHGV-0171638_34	PF09466	N/A	N/A	Hypothetical protein Yqai	Yqai
PHROG	UHGV-0171638_35	phrog_659	42.2	0.0000000000092	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171638_35	UniRef90_A0A6N9QJT6	198.0	0	N/A	N/A
eggNOG-mapper	UHGV-0171638_35	33035.JPJF01000135_gene5082	134.0	1.92e-36	N/A	N/A
Pfam	UHGV-0171638_35	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0171638_35	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_36	phrog_434	41.1	0.000000000024	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171638_36	UniRef90_B0PAM4	137.0	8.84e-38	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-0171638_36	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_37	phrog_72	70.7	1.9e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171638_37	UniRef90_A0A8D9PDS2	161.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0171638_37	445972.ANACOL_01825	160.0	0	N/A	N/A
Pfam	UHGV-0171638_37	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0171638_37	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_38	phrog_7370	62.1	7.9e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171638_38	UniRef90_A0A3D1LDS4	145.0	2.53635e-43	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0171638_38	1123058.KB894266_gene1536	58.2	0.0000000159	HNH endonuclease	N/A
Pfam	UHGV-0171638_38	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0171638_38	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0171638_40	K03111	132.9	3.9e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0171638_40	phrog_44	140.9	7.79963e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171638_40	UniRef90_UPI001C02B0E9	181.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0171638_40	445972.ANACOL_00151	172.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0171638_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0171638_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0171638_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0171638_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0171638_40	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_41	phrog_15768	96.7	3.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0171638_41	742740.HMPREF9474_03117	104.0	3.58e-24	N/A	N/A
structural_annotation	UHGV-0171638_41	PF01978,MF_01819,NF041413,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0171638_44	K00390	95.8	5.1e-28	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0171638_44	phrog_424	109.7	2.7e-32	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0171638_44	UniRef90_UPI001D087498	402.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0171638_44	1408437.JNJN01000032_gene2312	318.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0171638_44	BrxP_00001	67.9	2.2e-20	BrxP	BREX
Pfam	UHGV-0171638_44	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0171638_44	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0171638_44	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_46	phrog_3136	148.6	1.54143e-44	N/A	unknown function
UniRef90	UHGV-0171638_46	UniRef90_UPI001CBCD733	149.0	2.21966e-42	ASCH domain-containing protein	N/A
Pfam	UHGV-0171638_46	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0171638_46	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0171638_46	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_47	phrog_4019	73.0	3.2e-21	N/A	unknown function
PHROG	UHGV-0171638_48	phrog_38832	49.3	3.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-0171638_48	665956.HMPREF1032_03087	76.3	0.00000000000000149	N/A	N/A
structural_annotation	UHGV-0171638_48	PF11717,TIGR02450	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171638_54	UniRef90_UPI0019D1E2CF	258.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0171638_54	742735.HMPREF9467_00909	204.0	0	N/A	N/A
structural_annotation	UHGV-0171638_54	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_55	phrog_1770	45.2	0.0000000000014	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0171638_55	536233.CLO_1822	122.0	7.67e-33	N/A	N/A
structural_annotation	UHGV-0171638_55	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0171638_58	phrog_801	60.9	2.9e-17	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-0171638_58	UniRef90_A0A316M891	99.4	8.3e-25	N/A	N/A
eggNOG-mapper	UHGV-0171638_58	1366055.S5MLS6_9CAUD	64.7	0.0000000000274	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-0171638_58	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0171638_58	PF18909	N/A	N/A	N/A	N/A
Pfam	UHGV-0171638_59	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0171638_59	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0171638	Yes	40,940	54	100	1
UHGV-0179737	No	40,755	54	100	1
UHGV-0200847	No	40,482	53	100	1