vOTU vOTU-006411

vOTU: vOTU-006411

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-006411
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 → vSUBFAM-01985 → vGENUS-06322 → vSUBGEN-25316 → vOTU-006411
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Fimenecus → Fimenecus sp000432435
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1369206
Biosample ID	N/A
Genome length (bp)	30,865 bps
CheckV completeness	100.00% (Complete)
CDS count	43
CDS density	92.35%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Fimenecus → Fimenecus sp000432435	Total connections	80	Host agreement	78.75
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1369206_2	K08309	58.2	1.7e-16	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-1369206_2	phrog_19349	247.6	0	N/A	unknown function
UniRef90	UHGV-1369206_2	UniRef90_UPI00164BCB1C	312.0	0	transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1369206_2	742740.HMPREF9474_02375	181.0	0	lytic transglycosylase activity	N/A
Pfam	UHGV-1369206_2	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1369206_2	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1369206_2	PF01464,MF_01616,NF011856,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_3	phrog_3584	277.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1369206_3	1160721.RBI_I01590	237.0	0	N/A	N/A
structural_annotation	UHGV-1369206_3	PF21578,NF033538	N/A	N/A	N/A	N/A
KOfam	UHGV-1369206_5	K01520	158.5	0	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1369206_5	phrog_135	137.4	6.59998e-41	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1369206_5	UniRef90_UPI00164A78A3	258.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1369206_5	1282887.AUJG01000016_gene1113	152.0	8.40779e-45	N/A	N/A
Pfam	UHGV-1369206_5	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1369206_5	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1369206_5	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1369206_5	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_6	phrog_36	56.1	8.1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1369206_6	UniRef90_UPI00164ADA1B	255.0	0	sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1369206_6	484770.UFO1_1680	64.3	0.0000000000555	N/A	N/A
structural_annotation	UHGV-1369206_6	PF07374,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1369206_7	K07451	43.1	0.0000000000071	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1369206_7	phrog_119	70.2	2.9e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1369206_7	UniRef90_UPI00164BCC03	209.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1369206_7	1094508.Tsac_2429	120.0	5.12e-34	HNH nucleases	N/A
Pfam	UHGV-1369206_7	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1369206_7	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1369206_8	PF11305,MF_01360,NF010236	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_9	phrog_1066	109.6	1.7e-32	N/A	unknown function
UniRef90	UHGV-1369206_9	UniRef90_W0U724	123.0	4.79e-34	Phage terminase-like protein, small subunit	N/A
eggNOG-mapper	UHGV-1369206_9	1160721.RBI_I01586	123.0	8.03e-35	N/A	N/A
Pfam	UHGV-1369206_9	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1369206_9	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_10	phrog_9	399.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1369206_10	UniRef90_R6GIJ2	1030.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1369206_10	1160721.RBI_I01585	857.0	0	large subunit	N/A
Pfam	UHGV-1369206_10	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1369206_10	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1369206_10	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1369206_10	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_11	phrog_12	144.6	5.10073e-43	portal protein	head and packaging
UniRef90	UHGV-1369206_11	UniRef90_UPI00164A28CE	803.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1369206_11	1160721.RBI_I01584	527.0	0	Phage portal protein	N/A
Pfam	UHGV-1369206_11	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1369206_11	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1369206_11	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1369206_12	K06904	92.9	4.4e-27	N/A	N/A
PHROG	UHGV-1369206_12	phrog_80	112.6	4.9e-33	head maturation protease	head and packaging
UniRef90	UHGV-1369206_12	UniRef90_UPI00164CA03D	374.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1369206_12	1160721.RBI_I01583	157.0	1.4013e-45	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1369206_12	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
COG	UHGV-1369206_12	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1369206_12	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_13	phrog_10	150.7	1.26117e-44	major head protein	head and packaging
UniRef90	UHGV-1369206_13	UniRef90_UPI00164A2915	684.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1369206_13	1297617.JPJD01000020_gene308	257.0	0	Phage capsid family	N/A
Pfam	UHGV-1369206_13	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1369206_13	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1369206_13	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1369206_13	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_14	phrog_5223	120.5	4.1e-36	neck protein	connector
UniRef90	UHGV-1369206_14	UniRef90_UPI00164CC5D8	191.0	0	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1369206_14	1160721.RBI_I01581	119.0	1.22e-33	N/A	N/A
NCBIFam	UHGV-1369206_14	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1369206_14	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_15	phrog_1951	109.5	1.4e-32	head-tail adaptor	connector
UniRef90	UHGV-1369206_15	UniRef90_UPI00164AE9A9	215.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1369206_15	1160721.RBI_I01580	138.0	2.42004e-41	head-tail adaptor	N/A
NCBIFam	UHGV-1369206_15	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1369206_15	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1369206_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_16	phrog_957	43.3	0.0000000000052	head protein	head and packaging
structural_annotation	UHGV-1369206_16	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_17	phrog_885	111.5	6.5e-33	major tail protein	tail
UniRef90	UHGV-1369206_17	UniRef90_A0A7C6X6S5	159.0	1.4013e-44	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1369206_17	1160721.RBI_I01578	238.0	0	N/A	N/A
structural_annotation	UHGV-1369206_17	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_20	phrog_8462	141.1	4.60046e-42	tail length tape measure protein	tail
UniRef90	UHGV-1369206_20	UniRef90_R6GII4	574.0	0	Immunity-specific protein Beta241	N/A
eggNOG-mapper	UHGV-1369206_20	1160721.RBI_I01576	403.0	0	tail tape measure protein, TP901	N/A
COG	UHGV-1369206_20	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-1369206_21	phrog_33	102.9	4.7e-30	distal tail protein Dit	tail
UniRef90	UHGV-1369206_21	UniRef90_UPI00164BA811	437.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1369206_21	1160721.RBI_I01575	285.0	0	Phage tail protein	N/A
NCBIFam	UHGV-1369206_21	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1369206_21	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1369206_21	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_22	phrog_1067	453.5	0	minor head protein	head and packaging
UniRef90	UHGV-1369206_22	UniRef90_R6GLF8	1223.0	0	Phage minor structural protein region	N/A
eggNOG-mapper	UHGV-1369206_22	1160721.RBI_I01574	627.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1369206_22	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-1369206_22	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1369206_22	PF04862	N/A	N/A	N/A	DUF642
NCBIFam	UHGV-1369206_22	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1369206_22	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1369206_22	PF14594,PF04862,TIGR01665,NF033675,COG4926,COG4935	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_23	phrog_372	292.6	0	tail protein	tail
UniRef90	UHGV-1369206_23	UniRef90_A0A1Y4NAZ0	551.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1369206_23	1540091.A0A0A0RPE7_9CAUD	85.9	0.0000000000000193	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1369206_23	PF00041	N/A	N/A	Fibronectin type III domain	fn3
Pfam	UHGV-1369206_23	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1369206_23	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_24	phrog_19280	523.4	0	N/A	unknown function
UniRef90	UHGV-1369206_24	UniRef90_UPI00164B6084	748.0	0	N/A	N/A
eggNOG-mapper	UHGV-1369206_24	1160721.RBI_I01569	181.0	0	N/A	N/A
Pfam	UHGV-1369206_24	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-1369206_24	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1369206_24	PF19789,PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_25	phrog_3206	81.6	6.7e-24	Avd protein of DGR	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1369206_25	UniRef90_A0A4S2HBV4	89.0	5.16e-20	Four helix bundle protein	N/A
eggNOG-mapper	UHGV-1369206_25	1235797.C816_02835	54.3	0.000000231	N/A	N/A
structural_annotation	UHGV-1369206_25	PF05635,NF008911	N/A	N/A	N/A	N/A
KOfam	UHGV-1369206_26	K00986	114.2	1.3e-33	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-1369206_26	phrog_1423	264.0	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1369206_26	UniRef90_R6GLF4	635.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-1369206_26	1160721.RBI_I01568	305.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-1369206_26	icity0040	94.7	2.2e-27	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-1369206_26	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-1369206_26	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-1369206_26	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_27	phrog_4912	72.8	5.8e-21	tail fiber assembly	tail
UniRef90	UHGV-1369206_27	UniRef90_UPI00164B563B	199.0	0	phage tail assembly chaperone	N/A
eggNOG-mapper	UHGV-1369206_27	269482.Bcep1808_1285	50.8	0.00000389	Phage tail assembly chaperone protein	N/A
Pfam	UHGV-1369206_27	PF16778	N/A	N/A	Phage tail assembly chaperone protein	Phage_tail_APC
structural_annotation	UHGV-1369206_27	PF16778	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_29	phrog_4105	75.0	8.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1369206_29	397288.C806_00056	92.0	1.32e-22	N/A	N/A
PHROG	UHGV-1369206_30	phrog_263	92.0	3.2e-27	holin	lysis
UniRef90	UHGV-1369206_30	UniRef90_UPI00164AA2E4	144.0	1.93379e-43	phage holin	N/A
eggNOG-mapper	UHGV-1369206_30	1158607.UAU_01779	75.5	8.6e-17	SPP1 phage holin	N/A
Pfam	UHGV-1369206_30	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-1369206_30	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1369206_30	PF04688,TIGR01592	N/A	N/A	N/A	N/A
KOfam	UHGV-1369206_31	K01447	75.5	8.9e-22	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1369206_31	phrog_1794	187.7	0	amidase	lysis
UniRef90	UHGV-1369206_31	UniRef90_UPI00164C1B4B	513.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-1369206_31	573061.Clocel_3960	325.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1369206_31	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1369206_31	PF05036	N/A	N/A	SPOR domain	SPOR
Pfam	UHGV-1369206_31	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1369206_31	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1369206_31	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1369206_32	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-1369206_36	UniRef90_R6TP76	89.7	2.1e-22	RHH_1 domain-containing protein	N/A
Pfam	UHGV-1369206_36	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-1369206_36	PF01402,NF040976,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-1369206_37	K07482	304.3	0	K07482; transposase, IS30 family	N/A
PHROG	UHGV-1369206_37	phrog_4646	392.5	0	transposase	integration and excision
UniRef90	UHGV-1369206_37	UniRef90_UPI00164A43CF	642.0	0	IS30 family transposase	N/A
eggNOG-mapper	UHGV-1369206_37	411459.RUMOBE_01705	377.0	0	COG COG2826 Transposase and inactivated derivatives, IS30 family	N/A
Pfam	UHGV-1369206_37	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
Pfam	UHGV-1369206_37	PF00665	N/A	N/A	Integrase core domain	rve
NCBIFam	UHGV-1369206_37	NF033563.0	N/A	N/A	IS30 family transposase	N/A
COG	UHGV-1369206_37	COG2826	N/A	N/A	Transposase and inactivated derivatives, IS30 family	N/A
structural_annotation	UHGV-1369206_37	PF03400,PF13384,NF033563,COG2826	N/A	N/A	N/A	N/A
KOfam	UHGV-1369206_38	K07482	53.3	0.0000000000000044	K07482; transposase, IS30 family	N/A
PHROG	UHGV-1369206_38	phrog_11420	124.9	1.8e-37	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1369206_38	UniRef90_UPI00164AA34C	156.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1369206_38	1203606.HMPREF1526_01866	91.3	9.34e-23	Helix-turn-helix domain	N/A
Pfam	UHGV-1369206_38	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
structural_annotation	UHGV-1369206_38	PF04218	N/A	N/A	N/A	N/A
KOfam	UHGV-1369206_39	K00558	58.7	1.9e-20	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1369206_39	phrog_17284	125.4	0	N/A	unknown function
UniRef90	UHGV-1369206_39	UniRef90_R8VX88	294.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1369206_39	1203606.HMPREF1526_01874	294.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
Pfam	UHGV-1369206_39	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1369206_39	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1369206_39	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1369206_40	PF13613	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_41	phrog_9958	192.8	0	N/A	unknown function
UniRef90	UHGV-1369206_41	UniRef90_R6GLI1	272.0	0	N/A	N/A
eggNOG-mapper	UHGV-1369206_41	246199.CUS_4486	149.0	1.07e-40	N/A	N/A
Pfam	UHGV-1369206_41	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1369206_41	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1369206_43	phrog_24518	228.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1369206_43	1519439.JPJG01000077_gene922	140.0	6.89e-39	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1369206	Yes	30,865	49	100	1
UHGV-1369204	No	30,865	49	100	1
UHGV-0087666	No	22,881	49	73	1
UHGV-1425362	No	22,881	49	73	1
UHGV-1380925	No	22,397	49	72	1
UHGV-1384678	No	22,218	49	71	1
UHGV-2202677	No	15,020	49	48	1