vOTU vOTU-006531

vOTU: vOTU-006531

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-006531
Number of genomes	6
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00707 → vGENUS-01662 → vSUBGEN-21953 → vOTU-006531
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1383033
Biosample ID	N/A
Genome length (bp)	43,144 bps
CheckV completeness	100.00% (Complete)
CDS count	58
CDS density	93.87%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	54	Host agreement	92.59
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1383033_1	phrog_22978	66.3	1.3e-19	N/A	unknown function
PHROG	UHGV-1383033_5	phrog_16490	47.9	0.00000000000025	N/A	unknown function
eggNOG-mapper	UHGV-1383033_5	641112.ACOK01000103_gene525	110.0	1.69e-27	N/A	N/A
structural_annotation	UHGV-1383033_6	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383033_7	UniRef90_A0A8F0WD75	71.2	0.00000000000253	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1383033_7	1408437.JNJN01000043_gene801	72.8	0.000000000000119	N/A	N/A
KOfam	UHGV-1383033_8	K06400	295.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1383033_8	phrog_95	301.9	0	integrase	integration and excision
UniRef90	UHGV-1383033_8	UniRef90_A0A3A9I9T1	349.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1383033_8	903814.ELI_4654	289.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1383033_8	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1383033_8	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1383033_8	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1383033_8	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1383033_8	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383033_9	UniRef90_A0A8D9UHA6	88.6	3e-19	Helix-turn-helix XRE-family like protein	N/A
eggNOG-mapper	UHGV-1383033_9	428127.EUBDOL_00306	53.1	0.000000494	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1383033_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1383033_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1383033_9	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1383033_15	phrog_3136	128.4	2.6e-38	N/A	unknown function
UniRef90	UHGV-1383033_15	UniRef90_A0A3D0HBD2	135.0	2.59e-37	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1383033_15	77048.O80195_9CAUD	50.8	0.0000084	N/A	N/A
structural_annotation	UHGV-1383033_15	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1383033_16	phrog_38832	52.7	0.0000000000000051	N/A	unknown function
eggNOG-mapper	UHGV-1383033_16	1232443.BAIA02000078_gene48	61.2	0.000000000143	N/A	N/A
structural_annotation	UHGV-1383033_16	PF11717,TIGR02450	N/A	N/A	N/A	N/A
KOfam	UHGV-1383033_19	K00390	101.0	6.8e-31	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1383033_19	phrog_424	121.8	4.4e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1383033_19	UniRef90_UPI001C034617	273.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1383033_19	1232452.BAIB02000007_gene1640	249.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1383033_19	BrxP_00001	45.3	2.5e-23	BrxP	BREX
Pfam	UHGV-1383033_19	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1383033_19	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1383033_19	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1383033_20	K00558	137.2	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1383033_20	phrog_116	181.2	0	DNA methyltransferase	other
UniRef90	UHGV-1383033_20	UniRef90_A0A316NA61	330.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1383033_20	871963.Desdi_1341	323.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1383033_20	oMTase_00004	167.2	0	orphan methyltransferase	RM
Pfam	UHGV-1383033_20	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1383033_20	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-1383033_23	K01160	47.4	0.00000000000049	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1383033_23	phrog_4632	55.2	4.1e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383033_23	UniRef90_A0A7X8IB41	113.0	3.95e-30	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1383033_23	469604.HMPREF0946_00819	55.1	0.0000000519	N/A	N/A
structural_annotation	UHGV-1383033_23	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1383033_24	1410650.JHWL01000003_gene2848	62.0	0.00000000709	N/A	N/A
structural_annotation	UHGV-1383033_24	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1383033_25	K03111	146.2	3.19496e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1383033_25	phrog_44	138.5	4.10006e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383033_25	UniRef90_A0A810QFR8	170.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1383033_25	1007096.BAGW01000023_gene151	165.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1383033_25	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1383033_25	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1383033_25	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1383033_25	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1383033_25	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383033_26	PF12844,MF_00535,NF041951,COG5499	N/A	N/A	N/A	N/A
PHROG	UHGV-1383033_27	phrog_7566	93.4	1.4e-27	N/A	unknown function
UniRef90	UHGV-1383033_27	UniRef90_A0A8D9UHC0	144.0	2.42425e-43	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-1383033_27	693746.OBV_24070	132.0	5.76e-39	N/A	N/A
PHROG	UHGV-1383033_28	phrog_72	45.5	0.00000000000057	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383033_28	UniRef90_A0A8D9PDS2	239.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1383033_28	445972.ANACOL_01825	121.0	2.2e-32	N/A	N/A
structural_annotation	UHGV-1383033_28	PF05772	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383033_29	UniRef90_B0PAM4	140.0	1.06e-38	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-1383033_29	PF09588,TIGR04328,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383033_30	UniRef90_A0A845QLQ8	192.0	0	N/A	N/A
eggNOG-mapper	UHGV-1383033_30	33035.JPJF01000135_gene5082	119.0	9.26e-31	N/A	N/A
Pfam	UHGV-1383033_30	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1383033_30	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383033_33	PF13384	N/A	N/A	N/A	N/A
Pfam	UHGV-1383033_34	PF04448	N/A	N/A	N/A	DUF551
KOfam	UHGV-1383033_37	K22300	73.2	4.8e-21	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1383033_37	phrog_8	54.8	6.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1383033_37	UniRef90_A0A3D3T8Y1	137.0	2.03e-39	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1383033_37	445972.ANACOL_03315	132.0	1.84e-38	N/A	N/A
Pfam	UHGV-1383033_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1383033_37	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1383033_37	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383033_42	UniRef90_UPI00141260EC	129.0	7.98e-36	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1383033_42	1226322.HMPREF1545_00042	109.0	5.85e-29	N/A	N/A
KOfam	UHGV-1383033_43	K06909	139.7	2.70002e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1383033_43	phrog_979	135.6	1.19993e-41	terminase large subunit	head and packaging
UniRef90	UHGV-1383033_43	UniRef90_A0A810Q5R0	653.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1383033_43	1410650.JHWL01000003_gene2834	608.0	0	N/A	N/A
Pfam	UHGV-1383033_43	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1383033_43	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1383033_43	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1383033_44	phrog_156	338.5	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1383033_44	1410650.JHWL01000003_gene2833	608.0	0	N/A	N/A
structural_annotation	UHGV-1383033_44	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1383033_45	K07584	50.0	0.000000000000055	N/A	N/A
PHROG	UHGV-1383033_45	phrog_4478	45.5	0.00000000000096	peptidase	other
UniRef90	UHGV-1383033_45	UniRef90_UPI0015B63E39	53.9	0.000000589	ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-1383033_45	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1383033_45	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383033_45	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1383033_46	phrog_13908	254.7	0	N/A	unknown function
UniRef90	UHGV-1383033_46	UniRef90_UPI0012DFC3C8	119.0	4.37e-27	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1383033_46	1410650.JHWL01000003_gene2831	112.0	4.76e-26	N/A	N/A
PHROG	UHGV-1383033_47	phrog_1357	275.9	0	major head protein	head and packaging
UniRef90	UHGV-1383033_47	UniRef90_A0A2V2GQW4	379.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1383033_47	748224.HMPREF9436_01399	352.0	0	N/A	N/A
Pfam	UHGV-1383033_47	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1383033_47	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1383033_47	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1383033_48	phrog_15239	49.2	0.000000000000081	N/A	unknown function
PHROG	UHGV-1383033_49	phrog_12105	123.7	8.8e-37	N/A	unknown function
eggNOG-mapper	UHGV-1383033_49	1226322.HMPREF1545_03850	82.4	1.56e-18	N/A	N/A
PHROG	UHGV-1383033_50	phrog_511	216.5	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1383033_50	1410650.JHWL01000003_gene2827	362.0	0	N/A	N/A
structural_annotation	UHGV-1383033_50	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383033_51	NF038340	N/A	N/A	N/A	N/A
PHROG	UHGV-1383033_52	phrog_372	275.5	0	tail protein	tail
UniRef90	UHGV-1383033_52	UniRef90_A0A3N0HXV0	221.0	0	Pilus assembly protein	N/A
eggNOG-mapper	UHGV-1383033_52	1235802.C823_05263	187.0	0	N/A	N/A
Pfam	UHGV-1383033_52	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1383033_52	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1383033_52	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1383033_54	phrog_1863	67.7	1.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-1383033_54	748224.HMPREF9436_01412	97.1	1.06e-25	N/A	N/A
PHROG	UHGV-1383033_55	phrog_1129	65.4	6.4e-19	holin	lysis
UniRef90	UHGV-1383033_55	UniRef90_R5D220	112.0	2.31e-30	Putative holin	N/A
eggNOG-mapper	UHGV-1383033_55	1007096.BAGW01000032_gene1582	105.0	2.14e-28	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1383033_55	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1383033_55	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1383033_56	K01446	83.5	1.9e-24	PGRP; peptidoglycan recognition protein	N/A
PHROG	UHGV-1383033_56	phrog_35436	135.3	3.4e-40	amidase	lysis
UniRef90	UHGV-1383033_56	UniRef90_A0A350TLR9	213.0	0	Peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1383033_56	1504823.CCMM01000008_gene1019	182.0	0	Ami_2	N/A
Pfam	UHGV-1383033_56	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1383033_56	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1383033_56	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1383033_56	PF01510,PF01471,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1383033_57	1410650.JHWL01000003_gene2815	154.0	4.12e-40	N/A	N/A
PHROG	UHGV-1383033_58	phrog_22978	697.8	0	N/A	unknown function
UniRef90	UHGV-1383033_58	UniRef90_R5G452	311.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1383033_58	1410650.JHWL01000003_gene2814	259.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1383033	Yes	43,144	58	100	1
UHGV-1361752	No	39,473	58	100	1
UHGV-1452011	No	44,797	58	100	1
UHGV-1432646	No	31,017	58	72	1
UHGV-1671291	No	12,585	61	29	1
UHGV-1623341	No	12,426	61	29	1