vOTU vOTU-007598

vOTU: vOTU-007598

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-007598
Number of genomes	32
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Taxonomy (UHGV)	vFAM-00134 → vSUBFAM-00483 → vGENUS-20874 → vSUBGEN-41378 → vOTU-007598
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0227382
Biosample ID	N/A
Genome length (bp)	30,335 bps
CheckV completeness	99.90% (High-quality)
CDS count	43
CDS density	85.44%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	67	Host agreement	97.01
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	95	Host agreement	84.21

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0227382_1	411461.DORFOR_00905	101.0	1.71e-24	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone	N/A
COG	UHGV-0227382_1	COG0550	N/A	N/A	DNA topoisomerase IA	N/A
PHROG	UHGV-0227382_2	phrog_9243	62.1	7.9e-18	N/A	unknown function
UniRef90	UHGV-0227382_2	UniRef90_UPI001CEC222A	217.0	0	N/A	N/A
eggNOG-mapper	UHGV-0227382_2	1118057.CAGX01000067_gene1128	224.0	0	N/A	N/A
Pfam	UHGV-0227382_2	PF12686	N/A	N/A	N/A	DUF3800
structural_annotation	UHGV-0227382_2	MF_00052_A,NF011119	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_3	phrog_13890	47.5	0.00000000000022	N/A	unknown function
structural_annotation	UHGV-0227382_6	NF041070	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_8	phrog_1535	84.8	1.3e-38	tail length tape measure protein	tail
UniRef90	UHGV-0227382_8	UniRef90_A0A810PX76	124.0	6.04e-26	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0227382_8	693746.OBV_18190	134.0	1.12e-29	domain protein	N/A
COG	UHGV-0227382_8	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0227382_8	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_9	phrog_706	121.8	4.6e-36	N/A	unknown function
UniRef90	UHGV-0227382_9	UniRef90_UPI001D069FB9	210.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0227382_9	693746.OBV_18170	196.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0227382_9	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0227382_9	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_10	phrog_11299	75.0	1.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0227382_10	693746.OBV_18160	169.0	0	N/A	N/A
structural_annotation	UHGV-0227382_10	PF10666	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0227382_14	1009370.ALO_17461	69.7	0.000000000000129	N/A	N/A
KOfam	UHGV-0227382_15	K03091	46.3	0.00000000000077	sigH; RNA polymerase sporulation-specific sigma factor	N/A
PHROG	UHGV-0227382_15	phrog_351	44.4	0.0000000000000041	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0227382_15	UniRef90_UPI001F4290AF	148.0	1.73999e-41	sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0227382_15	720554.Clocl_0693	54.3	0.00000359	Sigma-70, region 4	N/A
COG	UHGV-0227382_15	COG0568	N/A	N/A	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	N/A
structural_annotation	UHGV-0227382_15	PF07638,MF_00959,NF006147,COG0568	N/A	N/A	N/A	N/A
KOfam	UHGV-0227382_16	K02315	158.5	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0227382_16	phrog_50	150.0	1.54143e-44	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0227382_16	UniRef90_UPI00195C3322	269.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0227382_16	1121344.JHZO01000004_gene1170	270.0	0	N/A	N/A
Pfam	UHGV-0227382_16	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-0227382_16	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0227382_16	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0227382_16	PF01695,MF_01158,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_17	phrog_5708	154.9	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0227382_17	UniRef90_A0A2K4QBX8	146.0	5.55e-40	Phg_2220_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0227382_17	1203606.HMPREF1526_00313	147.0	3.78995e-41	DnaD domain protein	N/A
COG	UHGV-0227382_17	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0227382_17	PF09681,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_18	phrog_2113	45.5	0.00000000000091	N/A	unknown function
eggNOG-mapper	UHGV-0227382_18	1160721.RBI_II00485	55.1	0.000000019	N/A	N/A
structural_annotation	UHGV-0227382_18	PF08279,COG1654	N/A	N/A	N/A	N/A
UniRef90	UHGV-0227382_19	UniRef90_UPI000994F32A	47.8	0.00000874	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0227382_19	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0227382_19	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0227382_19	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0227382_20	552398.HMPREF0866_02243	88.6	1.04e-21	Helix-turn-helix XRE-family like proteins	N/A
PHROG	UHGV-0227382_21	phrog_4292	83.1	1.8e-24	N/A	unknown function
UniRef90	UHGV-0227382_21	UniRef90_I7J4K2	56.6	0.00000000149	Phage related protein	N/A
eggNOG-mapper	UHGV-0227382_21	552398.HMPREF0866_02241	97.1	2.53e-26	N/A	N/A
eggNOG-mapper	UHGV-0227382_22	552398.HMPREF0866_02239	582.0	0	N/A	N/A
structural_annotation	UHGV-0227382_22	PF01649,MF_00500,TIGR00029,COG0268	N/A	N/A	N/A	N/A
UniRef90	UHGV-0227382_23	UniRef90_R5HBV6	248.0	0	Translation initiation factor IF-2	N/A
eggNOG-mapper	UHGV-0227382_23	552398.HMPREF0866_02238	207.0	0	N/A	N/A
PHROG	UHGV-0227382_24	phrog_1468	52.9	0.0000000000000036	transcriptional repressor	transcription regulation
UniRef90	UHGV-0227382_24	UniRef90_R5HCD6	144.0	9.24857e-44	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0227382_24	1297617.JPJD01000049_gene1336	137.0	1.24001e-41	N/A	N/A
Pfam	UHGV-0227382_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0227382_24	PF01381,NF010465,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0227382_25	K07497	66.6	4.6e-19	K07497; putative transposase	N/A
PHROG	UHGV-0227382_25	phrog_310	351.0	0	transposase	integration and excision
UniRef90	UHGV-0227382_25	UniRef90_R5HRR1	1365.0	0	Mu transposase C-superfamily	N/A
eggNOG-mapper	UHGV-0227382_25	552398.HMPREF0866_02236	1293.0	0	Mu transposase, C-terminal	N/A
Pfam	UHGV-0227382_25	PF02914	N/A	N/A	Bacteriophage Mu transposase	DDE_2
Pfam	UHGV-0227382_25	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-0227382_25	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0227382_25	PF02914,PF09299,NF033594,COG2801	N/A	N/A	N/A	N/A
KOfam	UHGV-0227382_26	K12283	41.1	0.000000000018	mshM; MSHA biogenesis protein MshM	N/A
PHROG	UHGV-0227382_26	phrog_296	145.0	6.19374e-43	DNA transposition protein	integration and excision
UniRef90	UHGV-0227382_26	UniRef90_F4XF61	593.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0227382_26	1297617.JPJD01000049_gene1334	596.0	0	AAA domain	N/A
Pfam	UHGV-0227382_26	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-0227382_26	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-0227382_26	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_27	phrog_491	121.4	6e-36	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0227382_27	UniRef90_UPI00067F63B8	259.0	0	host-nuclease inhibitor Gam family protein	N/A
eggNOG-mapper	UHGV-0227382_27	552398.HMPREF0866_02234	310.0	0	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-0227382_27	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
COG	UHGV-0227382_27	COG4396	N/A	N/A	Mu-like prophage host-nuclease inhibitor protein Gam	N/A
structural_annotation	UHGV-0227382_27	PF07352,COG4396	N/A	N/A	N/A	N/A
KOfam	UHGV-0227382_28	K05925	78.7	8.2e-23	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	N/A
PHROG	UHGV-0227382_28	phrog_359	218.7	0	DNA methyltransferase	other
UniRef90	UHGV-0227382_28	UniRef90_F4XF59	302.0	0	Adenine-specific DNA methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0227382_28	552398.HMPREF0866_02233	302.0	0	Belongs to the MT-A70-like family	N/A
PADLOC	UHGV-0227382_28	MTase_II_00048	197.0	0	Type II methyltransferase	RM
Pfam	UHGV-0227382_28	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-0227382_28	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-0227382_28	PF05063,MF_01872,NF010253,COG4725	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_29	phrog_286	94.0	1.6e-27	N/A	unknown function
UniRef90	UHGV-0227382_29	UniRef90_A0A2V2D3Z2	199.0	0	Regulatory protein GemA	N/A
eggNOG-mapper	UHGV-0227382_29	1297617.JPJD01000049_gene1331	255.0	0	N/A	N/A
Pfam	UHGV-0227382_29	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
COG	UHGV-0227382_29	COG4382	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0227382_29	PF06252,COG4382	N/A	N/A	N/A	N/A
UniRef90	UHGV-0227382_30	UniRef90_A0A416RDK2	224.0	0	Translation initiation factor IF-2	N/A
eggNOG-mapper	UHGV-0227382_30	411483.FAEPRAA2165_03395	111.0	4.89e-30	N/A	N/A
PHROG	UHGV-0227382_32	phrog_33075	137.3	4.69996e-41	N/A	unknown function
UniRef90	UHGV-0227382_32	UniRef90_A0A416REG9	246.0	0	Addiction module toxin RelE	N/A
eggNOG-mapper	UHGV-0227382_32	552398.HMPREF0866_02228	171.0	0	SPTR Toxin-antitoxin system, toxin component, RelE family	N/A
KOfam	UHGV-0227382_34	K01448	87.3	1.8e-25	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0227382_34	phrog_435	145.3	4.40008e-43	endolysin	lysis
UniRef90	UHGV-0227382_34	UniRef90_A0A1C6I5H7	805.0	0	N-acetylmuramoyl-L-alanine amidase CwlD	N/A
eggNOG-mapper	UHGV-0227382_34	1297617.JPJD01000049_gene1326	769.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0227382_34	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0227382_34	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
COG	UHGV-0227382_34	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0227382_34	PF01520,PF01832,MF_00562,TIGR02883,NF009355,COG0860,COG1705	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_35	phrog_836	66.2	4.6e-19	late transcriptional activator	transcription regulation
UniRef90	UHGV-0227382_35	UniRef90_R5HBU0	242.0	0	DNA-binding protein RdgB	N/A
eggNOG-mapper	UHGV-0227382_35	1297617.JPJD01000049_gene1325	192.0	0	Mor transcription activator family	N/A
Pfam	UHGV-0227382_35	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-0227382_35	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-0227382_35	PF08765,NF040785,COG5566	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_36	phrog_36209	226.3	0	holin	lysis
UniRef90	UHGV-0227382_36	UniRef90_R5HGE4	312.0	0	Collagen alpha-1(I) chain (Alpha-1 type I collagen)	N/A
eggNOG-mapper	UHGV-0227382_36	1297617.JPJD01000049_gene1324	270.0	0	N/A	N/A
PHROG	UHGV-0227382_37	phrog_462	44.2	0.0000000000026	lipoprotein	other
eggNOG-mapper	UHGV-0227382_37	552398.HMPREF0866_02224	164.0	0	N/A	N/A
PHROG	UHGV-0227382_38	phrog_436	41.6	0.000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0227382_38	1297617.JPJD01000049_gene1322	209.0	0	N/A	N/A
structural_annotation	UHGV-0227382_38	PF10007,MF_01819,TIGR02337,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_39	phrog_426	108.1	9e-32	terminase small subunit	head and packaging
UniRef90	UHGV-0227382_39	UniRef90_UPI001AB02D0D	279.0	0	N/A	N/A
eggNOG-mapper	UHGV-0227382_39	1297617.JPJD01000049_gene1321	337.0	0	N/A	N/A
Pfam	UHGV-0227382_39	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-0227382_39	PF11985	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_40	phrog_38	275.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0227382_40	UniRef90_A0A6I2RII2	1118.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0227382_40	1297617.JPJD01000049_gene1320	1155.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0227382_40	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0227382_40	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0227382_40	PF17289,PF03354,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_41	phrog_113	351.2	0	portal protein	head and packaging
UniRef90	UHGV-0227382_41	UniRef90_D7GRF1	816.0	0	Mu-like prophage protein gp29	N/A
eggNOG-mapper	UHGV-0227382_41	1297617.JPJD01000049_gene1319	985.0	0	N/A	N/A
Pfam	UHGV-0227382_41	PF06074	N/A	N/A	N/A	DUF935
COG	UHGV-0227382_41	COG4383	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0227382_41	PF06074,MF_04135,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_42	phrog_220	180.9	0	head morphogenesis	head and packaging
UniRef90	UHGV-0227382_42	UniRef90_UPI00051C375A	476.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0227382_42	1297617.JPJD01000049_gene1318	476.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0227382_42	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0227382_42	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0227382_42	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0227382_42	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0227382_43	phrog_328	190.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0227382_43	UniRef90_R5HQP9	471.0	0	Serine/arginine repetitive matrix protein 1	N/A
eggNOG-mapper	UHGV-0227382_43	1297617.JPJD01000049_gene1317	411.0	0	Mu-like prophage I protein	N/A
Pfam	UHGV-0227382_43	PF10123	N/A	N/A	Mu-like prophage I protein	Mu-like_Pro
COG	UHGV-0227382_43	COG4388	N/A	N/A	Mu-like prophage I protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0227382	Yes	30,335	58	100	1
UHGV-1946702	No	17,585	52	100	1
UHGV-1952979	No	17,585	51	100	1
UHGV-2224405	No	14,488	51	100	1
UHGV-1946836	No	14,473	52	100	1
UHGV-2234509	No	13,797	51	97	1
UHGV-1492458	No	13,685	51	96	1
UHGV-2174230	No	13,637	51	95	1
UHGV-1928307	No	13,572	51	95	1
UHGV-2176209	No	13,557	51	95	1
UHGV-2237947	No	12,641	52	88	1
UHGV-1405720	No	11,636	52	81	1
UHGV-2237172	No	11,571	53	81	1
UHGV-1955543	No	11,130	53	78	1
UHGV-1406372	No	10,612	52	74	1
UHGV-1403516	No	10,597	51	74	1
UHGV-1409211	No	10,543	53	74	1
UHGV-2007219	No	10,394	53	73	1
UHGV-1424946	No	10,019	53	70	1
UHGV-2220625	No	9,943	53	70	1
UHGV-1447971	No	9,653	53	67	1
UHGV-1447980	No	9,650	53	67	1
UHGV-1442853	No	9,310	52	65	1
UHGV-1930568	No	9,149	53	64	1
UHGV-1398123	No	9,045	54	63	1
UHGV-1383306	No	8,884	52	62	1
UHGV-1464412	No	8,222	51	58	1
UHGV-1478038	No	8,028	52	56	1
UHGV-1459649	No	7,946	52	55	1
UHGV-1397067	No	7,587	53	53	1
UHGV-1380177	No	7,506	52	52	1
UHGV-1940998	No	13,636	51	24	1