vOTU vOTU-008242

vOTU: vOTU-008242

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-008242
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 → vSUBFAM-00719 → vGENUS-00714 → vSUBGEN-42081 → vOTU-008242
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0079558
Biosample ID	N/A
Genome length (bp)	28,783 bps
CheckV completeness	98.44% (High-quality)
CDS count	44
CDS density	93.70%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	316	Host agreement	97.78
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	94	Host agreement	90.43

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 98.44)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0079558_1	phrog_3558	209.4	0	tail protein	tail
UniRef90	UHGV-0079558_1	UniRef90_A0A3D1VAY1	881.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0079558_1	1120933.ATUY01000002_gene164	146.0	5.08e-35	Prophage endopeptidase tail	N/A
Pfam	UHGV-0079558_1	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0079558_1	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0079558_1	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0079558_1	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0079558_2	610130.Closa_0753	60.8	0.0000000679	phage tail	N/A
COG	UHGV-0079558_2	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0079558_2	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_3	phrog_23464	306.6	0	N/A	unknown function
UniRef90	UHGV-0079558_3	UniRef90_A0A1C6H5M9	265.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0079558_3	665950.HMPREF1025_02660	204.0	0	phage tail tape measure protein	N/A
COG	UHGV-0079558_3	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0079558_3	PF20155,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0079558_4	1219626.HMPREF1639_07460	88.6	8.51e-22	N/A	N/A
structural_annotation	UHGV-0079558_5	PF17388	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_6	phrog_2175	69.2	7e-20	protein with Ig domain	other
eggNOG-mapper	UHGV-0079558_6	1219626.HMPREF1639_07450	195.0	0	N/A	N/A
structural_annotation	UHGV-0079558_6	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079558_7	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0079558_8	UniRef90_A0A3A6N4L9	80.5	7.43e-17	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0079558_8	1033744.CAEL01000029_gene1278	62.8	0.0000000000853	N/A	N/A
structural_annotation	UHGV-0079558_8	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_9	phrog_1951	66.3	3.5e-19	head-tail adaptor	connector
UniRef90	UHGV-0079558_9	UniRef90_UPI00189BA764	75.1	0.00000000000000125	phage head closure protein	N/A
eggNOG-mapper	UHGV-0079558_9	1121428.DESHY_20140___1	58.2	0.00000000088	head-tail adaptor	N/A
COG	UHGV-0079558_9	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0079558_9	PF05354,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_10	phrog_5223	81.6	6.2e-24	neck protein	connector
UniRef90	UHGV-0079558_10	UniRef90_UPI000BEC4770	73.9	0.00000000000000329	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0079558_10	411465.PEPMIC_00737	62.4	0.0000000000195	N/A	N/A
NCBIFam	UHGV-0079558_10	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0079558_10	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_11	phrog_10	172.6	0	major head protein	head and packaging
UniRef90	UHGV-0079558_11	UniRef90_A0A2V2GLX5	466.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0079558_11	1297617.JPJD01000009_gene2879	171.0	0	Phage capsid family	N/A
Pfam	UHGV-0079558_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0079558_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0079558_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0079558_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0079558_12	K06904	88.4	1.2e-25	N/A	N/A
PHROG	UHGV-0079558_12	phrog_80	98.3	1.2e-28	head maturation protease	head and packaging
UniRef90	UHGV-0079558_12	UniRef90_A0A2V2GKJ3	286.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0079558_12	1321814.HMPREF9089_00929	207.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0079558_12	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
COG	UHGV-0079558_12	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0079558_12	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_13	phrog_12	104.9	6.7e-31	portal protein	head and packaging
UniRef90	UHGV-0079558_13	UniRef90_A0A2V2GK98	592.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0079558_13	411471.SUBVAR_05850	387.0	0	Phage portal protein	N/A
Pfam	UHGV-0079558_13	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0079558_13	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0079558_13	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_14	phrog_9	344.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0079558_14	UniRef90_A0A2V2GHH0	946.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0079558_14	742740.HMPREF9474_04307	752.0	0	COG COG4626 Phage terminase-like protein, large subunit	N/A
Pfam	UHGV-0079558_14	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0079558_14	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0079558_14	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0079558_14	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_15	phrog_1066	83.2	2.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0079558_15	411470.RUMGNA_02061	100.0	1.57e-25	N/A	N/A
structural_annotation	UHGV-0079558_15	PF05119,TIGR01558	N/A	N/A	N/A	N/A
UniRef90	UHGV-0079558_16	UniRef90_UPI0009BF3675	63.9	0.000000000012	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0079558_16	561177.ANHYDRO_01404	59.3	0.000000000152	HNH nucleases	N/A
COG	UHGV-0079558_16	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0079558_17	phrog_17658	54.8	0.0000000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0079558_17	536233.CLO_0894	70.5	0.000000000000507	N/A	N/A
structural_annotation	UHGV-0079558_17	PF18116	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_19	phrog_36	63.0	6.4e-18	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0079558_19	428125.CLOLEP_01806	108.0	5.62e-28	N/A	N/A
Pfam	UHGV-0079558_19	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0079558_19	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_21	phrog_2245	97.5	1.4e-28	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0079558_21	UniRef90_A0A4U9RLZ8	81.6	2.48e-18	N/A	N/A
eggNOG-mapper	UHGV-0079558_21	293826.Amet_2596	90.9	5.95e-22	N/A	N/A
structural_annotation	UHGV-0079558_21	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_22	phrog_5781	66.2	5e-19	N/A	unknown function
UniRef90	UHGV-0079558_22	UniRef90_A0A810Q4L2	110.0	2.31e-28	N/A	N/A
eggNOG-mapper	UHGV-0079558_22	573061.Clocel_3558	72.8	0.0000000000000259	N/A	N/A
Pfam	UHGV-0079558_22	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0079558_22	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0079558_22	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_23	phrog_1029	227.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0079558_23	1203606.HMPREF1526_01890	375.0	0	N/A	N/A
structural_annotation	UHGV-0079558_23	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_24	phrog_997	120.3	1.2e-35	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079558_24	UniRef90_R6MCS9	110.0	7.71e-29	N/A	N/A
eggNOG-mapper	UHGV-0079558_24	1519439.JPJG01000059_gene1910	177.0	0	N/A	N/A
KOfam	UHGV-0079558_25	K06223	228.7	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0079558_25	phrog_56	178.7	0	DNA methyltransferase	other
UniRef90	UHGV-0079558_25	UniRef90_R9MCP5	306.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0079558_25	1235799.C818_02654	306.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0079558_25	MTase_II_00030	275.3	0	Type II methyltransferase	RM
Pfam	UHGV-0079558_25	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0079558_25	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0079558_25	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
KOfam	UHGV-0079558_26	K00558	220.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0079558_26	phrog_116	259.4	0	DNA methyltransferase	other
UniRef90	UHGV-0079558_26	UniRef90_A0A350THX9	724.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0079558_26	1121334.KB911073_gene1852	611.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0079558_26	MTase_II_00020	96.4	7e-31	Type II methyltransferase	RM
Pfam	UHGV-0079558_26	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0079558_26	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0079558_26	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0079558_27	1232449.BAHV02000016_gene1829	135.0	3.42e-39	N/A	N/A
KOfam	UHGV-0079558_28	K03700	90.6	2.3e-26	recU; recombination protein U	N/A
PHROG	UHGV-0079558_28	phrog_843	140.1	8.2004e-42	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079558_28	UniRef90_A0A1H0W5Y9	170.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0079558_28	537013.CLOSTMETH_01720	153.0	2.66247e-44	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
Pfam	UHGV-0079558_28	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-0079558_28	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
structural_annotation	UHGV-0079558_28	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_29	phrog_3584	133.6	1.5e-39	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0079558_29	411470.RUMGNA_02047	135.0	3.12e-35	N/A	N/A
structural_annotation	UHGV-0079558_29	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0079558_32	K06284	124.7	5.1e-37	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0079558_32	phrog_4681	104.9	2.8e-31	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0079558_32	UniRef90_A0A1C5KSN6	110.0	4.26e-30	Transition state regulatory protein AbrB	N/A
eggNOG-mapper	UHGV-0079558_32	717606.PaecuDRAFT_2198	109.0	2.29e-30	AbrB family transcriptional regulator	N/A
Pfam	UHGV-0079558_32	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-0079558_32	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0079558_32	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0079558_32	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079558_33	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_34	phrog_585	42.7	0.000000000011	N/A	unknown function
Pfam	UHGV-0079558_34	PF10711	N/A	N/A	N/A	DUF2513
PHROG	UHGV-0079558_35	phrog_750	43.0	0.0000000000047	N/A	unknown function
structural_annotation	UHGV-0079558_35	PF13835,NF040858	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_36	phrog_38679	63.6	3e-18	N/A	unknown function
UniRef90	UHGV-0079558_37	UniRef90_A0A1Y4RCY6	78.2	9.67e-18	N/A	N/A
eggNOG-mapper	UHGV-0079558_37	445974.CLORAM_02965	74.7	4.69e-17	N/A	N/A
Pfam	UHGV-0079558_37	PF20432	N/A	N/A	Antitoxin Xre-like helix-turn-helix domain	Xre-like-HTH
structural_annotation	UHGV-0079558_37	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0079558_38	K22300	68.4	1.6e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0079558_38	phrog_8	83.2	4.2e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0079558_38	UniRef90_L7VL72	89.4	9.36e-21	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0079558_38	1121335.Clst_0369	89.4	1.57e-21	helix-turn-helix	N/A
Pfam	UHGV-0079558_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0079558_38	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0079558_38	PF13560,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0079558_39	phrog_1914	102.3	2e-30	N/A	unknown function
UniRef90	UHGV-0079558_39	UniRef90_R6DVV5	238.0	0	Predicted Zn peptidase	N/A
eggNOG-mapper	UHGV-0079558_39	1160721.RBI_I01604	147.0	2.0501e-42	N/A	N/A
Pfam	UHGV-0079558_39	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0079558_39	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0079558_39	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0079558_40	K02342	121.5	8e-36	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0079558_40	phrog_192	100.9	1.2e-29	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079558_40	UniRef90_A0A3D1VB11	514.0	0	Exonuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0079558_40	1408303.JNJJ01000108_gene69	204.0	0	3' exoribonuclease, RNase T-like	N/A
PADLOC	UHGV-0079558_40	cd06127	82.4	1.2e-23	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0079558_40	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0079558_40	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-0079558_40	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0079558_40	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0079558_41	1232453.BAIF02000097_gene2773	60.1	0.0000000363	EXOIII	N/A
COG	UHGV-0079558_41	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
eggNOG-mapper	UHGV-0079558_42	1262449.CP6013_2082	147.0	2.94273e-43	N/A	N/A
PHROG	UHGV-0079558_43	phrog_2158	205.2	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0079558_43	UniRef90_A0A1M5ZIM7	295.0	0	Abortive infection bacteriophage resistance protein	N/A
eggNOG-mapper	UHGV-0079558_43	1045858.Bint_2390	258.0	0	Abi-like protein	N/A
PADLOC	UHGV-0079558_43	AbiD	313.7	0	AbiD	Abi
Pfam	UHGV-0079558_43	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-0079558_43	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-0079558_43	PF07751,COG4823	N/A	N/A	N/A	N/A
KOfam	UHGV-0079558_44	K14059	152.4	5.60519e-45	int; integrase	N/A
PHROG	UHGV-0079558_44	phrog_1	152.1	4.2039e-45	integrase	integration and excision
UniRef90	UHGV-0079558_44	UniRef90_A0A2Z4QB94	332.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0079558_44	626523.GCWU000342_00320	97.4	4.59e-20	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0079558_44	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0079558_44	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0079558_44	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0079558	Yes	28,783	56	98	1
UHGV-1324789	No	31,570	57	100	1
UHGV-0154031	No	29,706	57	100	1
UHGV-0116230	No	27,541	56	94	1
UHGV-0117928	No	26,372	56	90	1
UHGV-0087420	No	24,232	57	83	1