vOTU vOTU-008727

vOTU: vOTU-008727

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-008727
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00707 → vGENUS-04664 → vSUBGEN-02762 → vOTU-008727
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0027666
Biosample ID	N/A
Genome length (bp)	41,769 bps
CheckV completeness	99.90% (High-quality)
CDS count	45
CDS density	94.28%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	83	Host agreement	97.59
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0027666_1	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
KOfam	UHGV-0027666_2	K06400	279.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0027666_2	phrog_95	305.0	0	integrase	integration and excision
UniRef90	UHGV-0027666_2	UniRef90_A0A810Q5V8	496.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0027666_2	357809.Cphy_2997	301.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0027666_2	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0027666_2	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0027666_2	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0027666_2	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0027666_2	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0027666_4	K01356	166.8	0	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0027666_4	phrog_4	118.3	8.3e-35	transcriptional repressor	transcription regulation
UniRef90	UHGV-0027666_4	UniRef90_A0A1Q6JHR3	392.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0027666_4	1121423.JONT01000002_gene2372	165.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0027666_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0027666_4	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0027666_4	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0027666_4	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027666_5	UniRef90_UPI001D00C35A	53.1	0.0000000564	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0027666_5	1273103.NM10_03301	62.4	0.00000000000226	N/A	N/A
eggNOG-mapper	UHGV-0027666_6	760568.Desku_0919	114.0	5.42e-29	N/A	N/A
structural_annotation	UHGV-0027666_6	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-0027666_8	K07319	99.6	2.4e-29	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0027666_8	phrog_16	224.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027666_8	UniRef90_A0A1Q6JHY3	1703.0	0	DNA methylase N-4	N/A
eggNOG-mapper	UHGV-0027666_8	1007096.BAGW01000031_gene119	1333.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0027666_8	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0027666_8	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0027666_8	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0027666_8	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0027666_10	phrog_997	101.2	8e-30	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027666_10	UniRef90_R6MCS9	105.0	5.59e-27	N/A	N/A
eggNOG-mapper	UHGV-0027666_10	1519439.JPJG01000059_gene1910	130.0	1.46e-37	N/A	N/A
PHROG	UHGV-0027666_11	phrog_1029	154.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0027666_11	552398.HMPREF0866_01625	130.0	3.45e-34	N/A	N/A
structural_annotation	UHGV-0027666_11	PF10065,COG5532	N/A	N/A	N/A	N/A
KOfam	UHGV-0027666_12	K03546	60.8	1.5e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0027666_12	phrog_1499	291.2	0	N/A	unknown function
UniRef90	UHGV-0027666_12	UniRef90_A0A1Q6JHZ0	827.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0027666_12	1007096.BAGW01000023_gene155	612.0	0	DNA recombination	N/A
Pfam	UHGV-0027666_12	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0027666_12	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-0027666_12	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0027666_13	phrog_21613	66.6	3.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0027666_13	1007096.BAGW01000023_gene153	133.0	2.69e-36	N/A	N/A
PHROG	UHGV-0027666_14	phrog_1227	222.2	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027666_14	UniRef90_UPI00164E5A62	422.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0027666_14	1007096.BAGW01000023_gene152	405.0	0	N/A	N/A
Pfam	UHGV-0027666_14	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0027666_14	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0027666_14	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
KOfam	UHGV-0027666_15	K03111	151.7	7.00649e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0027666_15	phrog_44	148.6	3.22299e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027666_15	UniRef90_A0A1Q6JI74	287.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0027666_15	1007096.BAGW01000023_gene151	203.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0027666_15	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0027666_15	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0027666_15	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0027666_15	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0027666_15	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0027666_16	K02316	71.5	1.3e-20	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0027666_16	phrog_11992	98.3	9.6e-29	N/A	unknown function
UniRef90	UHGV-0027666_16	UniRef90_A0A1Q6JHS4	358.0	0	ZnF_CHCC domain-containing protein	N/A
eggNOG-mapper	UHGV-0027666_16	1007096.BAGW01000023_gene150	148.0	3.71344e-43	CHC2 zinc finger	N/A
PADLOC	UHGV-0027666_16	drt-cluster192	59.5	7.9e-17	DRT	DRT
Pfam	UHGV-0027666_16	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0027666_16	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0027666_16	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-0027666_17	phrog_8841	488.7	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027666_17	UniRef90_UPI0002DD5FF2	877.0	0	N/A	N/A
eggNOG-mapper	UHGV-0027666_17	742738.HMPREF9460_02495	860.0	0	N/A	N/A
Pfam	UHGV-0027666_17	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0027666_17	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0027666_17	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027666_17	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0027666_18	K17677	398.8	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0027666_18	phrog_16	250.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027666_18	UniRef90_A0A2U1BEG6	731.0	0	Superfamily II DNA or RNA helicase	N/A
eggNOG-mapper	UHGV-0027666_18	742738.HMPREF9460_02499	716.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-0027666_18	mREase_IV_00005	122.0	5.1e-36	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0027666_18	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0027666_18	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0027666_18	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0027666_18	PF04851,PF16203,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0027666_19	phrog_824	124.6	4.4e-37	N/A	unknown function
UniRef90	UHGV-0027666_19	UniRef90_A0A1Q6JHZ3	252.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0027666_19	742738.HMPREF9460_02501	158.0	0	VRR_NUC	N/A
Pfam	UHGV-0027666_19	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0027666_19	PF08774	N/A	N/A	N/A	N/A
KOfam	UHGV-0027666_21	K00558	215.3	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0027666_21	phrog_116	257.7	0	DNA methyltransferase	other
UniRef90	UHGV-0027666_21	UniRef90_A0A350THX9	846.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0027666_21	1121334.KB911073_gene1852	647.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0027666_21	MTase_II_00164	99.0	8.4e-34	Type II methyltransferase	RM
Pfam	UHGV-0027666_21	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0027666_21	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0027666_21	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0027666_22	phrog_1384	132.5	2.6e-39	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0027666_22	665956.HMPREF1032_03086	275.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0027666_22	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0027666_26	phrog_22543	45.7	0.00000000000076	N/A	unknown function
UniRef90	UHGV-0027666_26	UniRef90_A0A8D9PDK2	108.0	6.66e-29	Zinc-ribbon containing domain	N/A
eggNOG-mapper	UHGV-0027666_28	742738.HMPREF9460_02503	89.7	4.56e-22	N/A	N/A
structural_annotation	UHGV-0027666_28	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027666_29	UniRef90_A0A1Q6JHV0	185.0	0	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0027666_29	1226322.HMPREF1545_00599	57.0	0.00000000748	Helix-turn-helix domain	N/A
Pfam	UHGV-0027666_29	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0027666_29	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
PHROG	UHGV-0027666_30	phrog_2412	89.2	4.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0027666_30	742738.HMPREF9460_02504	130.0	3.08e-37	N/A	N/A
KOfam	UHGV-0027666_31	K06909	141.2	9.19952e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0027666_31	phrog_979	134.3	2.70002e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0027666_31	UniRef90_A0A3D5TIM8	646.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0027666_31	1410650.JHWL01000003_gene2834	634.0	0	N/A	N/A
Pfam	UHGV-0027666_31	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0027666_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0027666_31	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0027666_32	phrog_156	328.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0027666_32	1410650.JHWL01000003_gene2833	579.0	0	N/A	N/A
structural_annotation	UHGV-0027666_32	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0027666_33	K07584	71.5	1.5e-20	N/A	N/A
PHROG	UHGV-0027666_33	phrog_4478	65.0	8.8e-19	peptidase	other
UniRef90	UHGV-0027666_33	UniRef90_UPI00102FFAFD	66.6	0.00000000000639	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0027666_33	718252.FP2_29210	60.1	0.0000000065	Cysteine protease Prp	N/A
Pfam	UHGV-0027666_33	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0027666_33	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027666_33	PF04327,NF011122,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0027666_34	phrog_13908	247.4	0	N/A	unknown function
UniRef90	UHGV-0027666_34	UniRef90_UPI0012DFC3C8	107.0	9.61e-23	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0027666_34	1410650.JHWL01000003_gene2831	154.0	4.67053e-42	N/A	N/A
PHROG	UHGV-0027666_35	phrog_1357	251.4	0	major head protein	head and packaging
UniRef90	UHGV-0027666_35	UniRef90_A0A1Q6JHY7	794.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0027666_35	1449126.JQKL01000003_gene1695	322.0	0	N/A	N/A
Pfam	UHGV-0027666_35	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0027666_35	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0027666_35	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0027666_36	phrog_15239	49.5	0.000000000000054	N/A	unknown function
PHROG	UHGV-0027666_37	phrog_12105	78.3	9.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0027666_37	1226322.HMPREF1545_03850	58.5	0.00000000303	N/A	N/A
PHROG	UHGV-0027666_38	phrog_511	222.1	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0027666_38	1410650.JHWL01000003_gene2827	353.0	0	N/A	N/A
structural_annotation	UHGV-0027666_38	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027666_39	NF038340	N/A	N/A	N/A	N/A
PHROG	UHGV-0027666_40	phrog_372	169.9	0	tail protein	tail
UniRef90	UHGV-0027666_40	UniRef90_UPI001373A0FD	211.0	0	N/A	N/A
eggNOG-mapper	UHGV-0027666_40	658088.HMPREF0987_01104	199.0	0	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0027666_40	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0027666_40	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0027666_40	PF05895,MF_04116,NF010681,COG3401,COG4675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027666_41	1410650.JHWL01000003_gene2815	137.0	4.63e-34	N/A	N/A
PHROG	UHGV-0027666_42	phrog_22978	454.3	0	N/A	unknown function
UniRef90	UHGV-0027666_42	UniRef90_UPI001C019A6F	359.0	0	OmpH family outer membrane protein	N/A
eggNOG-mapper	UHGV-0027666_42	1410650.JHWL01000003_gene2814	344.0	0	N/A	N/A
PHROG	UHGV-0027666_43	phrog_1863	66.3	2.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0027666_43	748224.HMPREF9436_00408	94.7	1.1e-24	N/A	N/A
PHROG	UHGV-0027666_44	phrog_881	88.5	3.7e-26	holin	lysis
UniRef90	UHGV-0027666_44	UniRef90_A0A8D9PDR9	98.2	1.75e-25	Holin	N/A
eggNOG-mapper	UHGV-0027666_44	476272.RUMHYD_01966	72.4	5.15e-16	Putative phage holin Dp-1	N/A
Pfam	UHGV-0027666_44	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0027666_44	PF16938,COG3237	N/A	N/A	N/A	N/A
KOfam	UHGV-0027666_45	K01448	47.9	0.00000000000019	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0027666_45	phrog_1493	70.9	2.1e-20	endolysin	lysis
UniRef90	UHGV-0027666_45	UniRef90_A0A810PUG7	202.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0027666_45	411473.RUMCAL_02267	100.0	5.36e-22	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0027666_45	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0027666_45	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0027666_45	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0027666_45	PF01520,PF01471,MF_00562,TIGR02883,TIGR03979,COG0860,COG3409	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0027666	Yes	41,769	58	100	1
UHGV-0199227	No	43,013	58	100	1
UHGV-0007785	No	39,812	58	97	1
UHGV-0007632	No	38,694	58	93	1
UHGV-1544621	No	33,987	58	82	1
UHGV-0122566	No	14,297	58	34	1