vOTU vOTU-008745

vOTU: vOTU-008745

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-008745
Number of genomes	12
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 → vSUBFAM-01866 → vGENUS-02430 → vSUBGEN-31520 → vOTU-008745
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0206406
Biosample ID	SAMN10407347
Genome length (bp)	35,009 bps
CheckV completeness	99.90% (High-quality)
CDS count	55
CDS density	91.84%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis	Total connections	358	Host agreement	85.2
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter	Total connections	17	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0206406_1	411489.CLOL250_02590	532.0	0	N/A	N/A
UniRef90	UHGV-0206406_4	UniRef90_UPI00156EF43B	108.0	1.35e-29	chemotaxis protein	N/A
eggNOG-mapper	UHGV-0206406_4	1042156.CXIVA_01520	66.6	0.0000000000000956	N/A	N/A
structural_annotation	UHGV-0206406_4	PF10723,NF008671,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_7	phrog_199	58.8	7.1e-17	holin	lysis
UniRef90	UHGV-0206406_7	UniRef90_A0A349YRM9	241.0	0	Holin	N/A
eggNOG-mapper	UHGV-0206406_7	411470.RUMGNA_02086	181.0	0	N/A	N/A
Pfam	UHGV-0206406_7	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0206406_7	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0206406_7	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0206406_7	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0206406_8	K07273	162.0	0	acm; lysozyme	N/A
PHROG	UHGV-0206406_8	phrog_291	132.2	4.5e-39	endolysin	lysis
UniRef90	UHGV-0206406_8	UniRef90_A0A174GRH8	684.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0206406_8	1235800.C819_00458	225.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0206406_8	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0206406_8	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0206406_8	PF01183,PF01471,MF_01672,COG3757,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_9	phrog_29601	103.0	1.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0206406_9	411468.CLOSCI_01508	89.4	1.41e-22	N/A	N/A
PHROG	UHGV-0206406_10	phrog_134	46.9	0.00000000000038	N/A	unknown function
UniRef90	UHGV-0206406_10	UniRef90_A0A349YRM6	78.2	3.5e-18	XkdX family protein	N/A
eggNOG-mapper	UHGV-0206406_10	742741.HMPREF9475_00440	55.5	0.000000000595	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0206406_10	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0206406_10	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-0206406_10	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_11	phrog_20201	51.7	0.000000000000018	N/A	unknown function
PHROG	UHGV-0206406_12	phrog_5302	285.3	0	tail protein	tail
UniRef90	UHGV-0206406_12	UniRef90_A0A345BPB9	256.0	0	Lectin	N/A
eggNOG-mapper	UHGV-0206406_12	428125.CLOLEP_01426	299.0	0	N/A	N/A
structural_annotation	UHGV-0206406_12	COG1262	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_13	phrog_19280	121.8	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0206406_13	537013.CLOSTMETH_03776	84.7	0.00000000000000415	N/A	N/A
structural_annotation	UHGV-0206406_13	PF10651,NF032891,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_15	phrog_1067	400.7	0	minor head protein	head and packaging
UniRef90	UHGV-0206406_15	UniRef90_A0A0M6WYA7	1394.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0206406_15	1160721.RBI_I01574	386.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0206406_15	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0206406_15	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0206406_15	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0206406_15	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_16	phrog_33	85.2	1.2e-24	distal tail protein Dit	tail
UniRef90	UHGV-0206406_16	UniRef90_UPI00164BA811	190.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0206406_16	1444306.JFZC01000034_gene2623	150.0	3.87039e-42	tail component	N/A
COG	UHGV-0206406_16	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0206406_16	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_17	phrog_1272	427.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0206406_17	UniRef90_A0A0M6WZJ0	1063.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0206406_17	742740.HMPREF9474_01203	355.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0206406_17	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0206406_17	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0206406_17	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0206406_17	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0206406_18	411468.CLOSCI_00541	95.5	2.54e-25	N/A	N/A
eggNOG-mapper	UHGV-0206406_19	411468.CLOSCI_00542	95.9	4.81e-24	N/A	N/A
structural_annotation	UHGV-0206406_19	PF06222	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_20	phrog_2175	64.2	2.2e-18	protein with Ig domain	other
UniRef90	UHGV-0206406_20	UniRef90_A0A401UUY1	185.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0206406_20	411468.CLOSCI_00543	212.0	0	N/A	N/A
structural_annotation	UHGV-0206406_20	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0206406_21	411902.CLOBOL_03875	58.9	0.0000000012	N/A	N/A
structural_annotation	UHGV-0206406_21	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_22	phrog_5	40.1	0.000000000086	tail completion or Neck1 protein	connector
UniRef90	UHGV-0206406_22	UniRef90_UPI001C00E12E	109.0	4.44e-28	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0206406_22	411902.CLOBOL_03876	114.0	6.94e-31	COG NOG18351 non supervised orthologous group	N/A
Pfam	UHGV-0206406_22	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0206406_22	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_23	phrog_1951	66.5	3.1e-19	head-tail adaptor	connector
UniRef90	UHGV-0206406_23	UniRef90_UPI00189EBA11	108.0	7.38e-29	phage head closure protein	N/A
eggNOG-mapper	UHGV-0206406_23	1123263.AUKY01000046_gene471	64.7	0.00000000000258	N/A	N/A
NCBIFam	UHGV-0206406_23	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0206406_23	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_24	phrog_5223	64.4	1.3e-18	neck protein	connector
UniRef90	UHGV-0206406_24	UniRef90_A0A174XIL0	115.0	1.32e-31	N/A	N/A
eggNOG-mapper	UHGV-0206406_24	411902.CLOBOL_03878	114.0	1.11e-31	N/A	N/A
PHROG	UHGV-0206406_25	phrog_10	129.4	3.4e-38	major head protein	head and packaging
UniRef90	UHGV-0206406_25	UniRef90_A0A0M6WZM3	733.0	0	Bacterial surface proteins containing Ig-like domains	N/A
eggNOG-mapper	UHGV-0206406_25	411468.CLOSCI_00548	545.0	0	Phage capsid family	N/A
Pfam	UHGV-0206406_25	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0206406_25	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0206406_25	PF05065,PF09032,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0206406_26	K01358	146.8	1.90577e-43	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0206406_26	phrog_94	224.4	0	head maturation protease	head and packaging
UniRef90	UHGV-0206406_26	UniRef90_A0A0M6WYF6	416.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0206406_26	411468.CLOSCI_00549	319.0	0	COG COG0740 Protease subunit of ATP-dependent Clp proteases	N/A
Pfam	UHGV-0206406_26	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0206406_26	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0206406_26	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_27	phrog_12	163.4	0	portal protein	head and packaging
UniRef90	UHGV-0206406_27	UniRef90_B0NAT1	545.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0206406_27	411468.CLOSCI_00550	545.0	0	Phage portal protein	N/A
Pfam	UHGV-0206406_27	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0206406_27	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0206406_27	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_28	phrog_9	347.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0206406_28	UniRef90_A0A374JP15	776.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0206406_28	411468.CLOSCI_00551	773.0	0	COG COG4626 Phage terminase-like protein, large subunit	N/A
Pfam	UHGV-0206406_28	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0206406_28	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0206406_28	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0206406_28	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_29	phrog_1066	70.4	2.1e-20	N/A	unknown function
UniRef90	UHGV-0206406_29	UniRef90_B0NAT3	155.0	0	Putative phage terminase, small subunit, P27 family	N/A
eggNOG-mapper	UHGV-0206406_29	411902.CLOBOL_03883	157.0	0	N/A	N/A
Pfam	UHGV-0206406_29	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0206406_29	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_30	phrog_119	64.5	1.7e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0206406_30	UniRef90_A0A374JQS6	139.0	2.1e-40	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0206406_30	411468.CLOSCI_00553	137.0	1.01e-40	HNH endonuclease	N/A
COG	UHGV-0206406_30	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0206406_31	411468.CLOSCI_00554	118.0	5.69e-33	N/A	N/A
PHROG	UHGV-0206406_32	phrog_3584	236.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0206406_32	UniRef90_A0A4P8IFK4	186.0	0	N/A	N/A
eggNOG-mapper	UHGV-0206406_32	411902.CLOBOL_03891	389.0	0	N/A	N/A
structural_annotation	UHGV-0206406_32	PF21578	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206406_33	PF17384,MF_00436,NF033216,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_34	phrog_20593	57.9	1.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0206406_35	445972.ANACOL_01837	48.1	0.00000175	N/A	N/A
structural_annotation	UHGV-0206406_36	NF011508	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_37	phrog_15077	97.0	2.2e-29	N/A	unknown function
UniRef90	UHGV-0206406_37	UniRef90_UPI001D0741A0	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-0206406_37	97139.C824_05986	328.0	0	N/A	N/A
structural_annotation	UHGV-0206406_37	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0206406_38	phrog_8470	343.6	0	N/A	unknown function
UniRef90	UHGV-0206406_38	UniRef90_UPI001D086F83	827.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0206406_38	1235792.C808_00066	884.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0206406_38	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0206406_38	PF14284	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0206406_39	1235792.C808_00065	243.0	0	N/A	N/A
UniRef90	UHGV-0206406_40	UniRef90_A0A417WAJ1	112.0	6.57e-30	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0206406_40	1235800.C819_02254	121.0	8.05e-34	HNH nucleases	N/A
structural_annotation	UHGV-0206406_44	PF18066,NF007780,COG1544	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206406_46	PF09486,TIGR03090,COG5420	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206406_50	PF13560,MF_00535,NF041677,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0206406_53	K01356	143.0	3.09967e-42	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0206406_53	phrog_4	130.0	2.1e-38	transcriptional repressor	transcription regulation
UniRef90	UHGV-0206406_53	UniRef90_C4Z801	323.0	0	SOS-response transcriptional repressor, LexA	N/A
eggNOG-mapper	UHGV-0206406_53	1321820.HMPREF1983_00958	192.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0206406_53	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-0206406_53	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0206406_53	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0206406_53	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-0206406_54	K18830	53.3	0.0000000000000065	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0206406_54	phrog_8	80.1	3.8e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0206406_54	UniRef90_UPI00156FB04E	123.0	1.81e-33	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0206406_54	1235790.C805_00362	114.0	8.3e-31	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0206406_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0206406_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0206406_54	PF01381,MF_02017,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0206406_55	K22299	47.8	3.6e-24	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0206406_55	phrog_8	80.6	1.9e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0206406_55	UniRef90_A0A0M6WGY8	234.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0206406_55	1005705.HMPREF9967_0944	107.0	1.81e-25	Peptidase S24-like	N/A
Pfam	UHGV-0206406_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0206406_55	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0206406	Yes	35,009	43	100	1
UHGV-1420147	No	35,854	44	100	1
UHGV-0302360	No	33,896	44	100	1
UHGV-0066413	No	30,514	44	92	1
UHGV-0132887	No	26,765	44	83	1
UHGV-0257427	No	24,720	45	75	1
UHGV-0035534	No	19,035	44	58	1
UHGV-1396802	No	17,024	45	51	1
UHGV-1640956	No	16,296	45	49	1
UHGV-0140174	No	15,429	44	44	1
UHGV-0133422	No	12,964	45	40	1
UHGV-0327123	No	10,546	43	19	1