vOTU vOTU-008970

vOTU: vOTU-008970

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-008970
Number of genomes	14
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia
Taxonomy (UHGV)	vFAM-00022 → vSUBFAM-01684 → vGENUS-13313 → vSUBGEN-21273 → vOTU-008970
Host lineage	Bacteria → Firmicutes_A → Clostridia
Host range breadth	Class
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1435867
Biosample ID	SAMN02334114
Genome length (bp)	32,090 bps
CheckV completeness	93.66% (High-quality)
CDS count	45
CDS density	93.74%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.66)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1435867_1	phrog_33	61.5	1.9e-17	distal tail protein Dit	tail
UniRef90	UHGV-1435867_1	UniRef90_UPI00164BA811	180.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1435867_1	1444306.JFZC01000034_gene2623	161.0	0	tail component	N/A
COG	UHGV-1435867_1	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1435867_1	PF20753,PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_2	phrog_1067	450.4	0	minor head protein	head and packaging
UniRef90	UHGV-1435867_2	UniRef90_R6GLF8	543.0	0	Phage minor structural protein region	N/A
eggNOG-mapper	UHGV-1435867_2	1160721.RBI_I01574	509.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1435867_2	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-1435867_2	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1435867_2	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1435867_2	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1435867_3	phrog_37329	97.8	4.9e-29	N/A	unknown function
eggNOG-mapper	UHGV-1435867_3	1227349.C170_22575	76.3	0.00000000000149	Fibronectin type 3 domain	N/A
COG	UHGV-1435867_3	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1435867_4	PF10618	N/A	N/A	N/A	N/A
KOfam	UHGV-1435867_5	K21473	49.3	0.000000000000078	ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]	N/A
PHROG	UHGV-1435867_5	phrog_17147	173.8	0	N/A	unknown function
UniRef90	UHGV-1435867_5	UniRef90_A0A1F8V1G3	287.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1435867_5	1507.HMPREF0262_00245	199.0	0	N/A	N/A
Pfam	UHGV-1435867_5	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-1435867_5	PF12571	N/A	N/A	N/A	N/A
KOfam	UHGV-1435867_6	K00986	184.4	0	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-1435867_6	phrog_1423	310.3	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1435867_6	UniRef90_A0A7C6HAS8	402.0	0	RNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1435867_6	755164.D6PSR5_9CAUD	347.0	0	RNA-directed DNA polymerase activity	N/A
PADLOC	UHGV-1435867_6	icity0040	119.1	5.9e-35	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-1435867_6	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
structural_annotation	UHGV-1435867_6	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1435867_8	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_9	phrog_199	68.8	6.6e-20	holin	lysis
UniRef90	UHGV-1435867_9	UniRef90_A0A1C5RE41	186.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-1435867_9	552396.HMPREF0863_00264	140.0	1.07e-40	Bacteriophage holin family	N/A
Pfam	UHGV-1435867_9	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1435867_9	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1435867_9	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1435867_10	K01447	126.1	3.5e-37	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1435867_10	phrog_3088	137.7	8.5e-41	amidase	lysis
UniRef90	UHGV-1435867_10	UniRef90_A0A1V5S1N9	263.0	0	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
eggNOG-mapper	UHGV-1435867_10	1203606.HMPREF1526_00589	166.0	0	Ami_2	N/A
Pfam	UHGV-1435867_10	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1435867_10	PF00395	N/A	N/A	S-layer homology domain	SLH
COG	UHGV-1435867_10	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1435867_10	PF01510,PF14627,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-1435867_11	K04892	165.4	0	KCND2, KV4.2; potassium voltage-gated channel Shal-related subfamily D member 2	N/A
PHROG	UHGV-1435867_11	phrog_7872	234.0	0	N/A	unknown function
UniRef90	UHGV-1435867_11	UniRef90_A0A7W8LMQ4	300.0	0	Voltage-gated potassium channel	N/A
eggNOG-mapper	UHGV-1435867_11	742733.HMPREF9469_00903	285.0	0	Ion transport protein	N/A
Pfam	UHGV-1435867_11	PF00520	N/A	N/A	Ion transport protein	Ion_trans
COG	UHGV-1435867_11	COG0569	N/A	N/A	Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain	N/A
structural_annotation	UHGV-1435867_11	PF00520,NF040645	N/A	N/A	N/A	N/A
KOfam	UHGV-1435867_12	K22300	52.3	0.000000000000013	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1435867_12	phrog_3	40.5	0.000000000095	transcriptional repressor	transcription regulation
UniRef90	UHGV-1435867_12	UniRef90_A0A355JET8	124.0	1.31e-35	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1435867_12	1235797.C816_02851	115.0	8.67e-33	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1435867_12	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1435867_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1435867_12	PF13560,NF041951,COG1813	N/A	N/A	N/A	N/A
KOfam	UHGV-1435867_16	K07482	310.3	0	K07482; transposase, IS30 family	N/A
PHROG	UHGV-1435867_16	phrog_4646	393.1	0	transposase	integration and excision
UniRef90	UHGV-1435867_16	UniRef90_A0A174MGT5	404.0	0	Transposase and inactivated derivatives, IS30 family	N/A
eggNOG-mapper	UHGV-1435867_16	411459.RUMOBE_01705	404.0	0	COG COG2826 Transposase and inactivated derivatives, IS30 family	N/A
NCBIFam	UHGV-1435867_16	NF033563.0	N/A	N/A	IS30 family transposase	N/A
COG	UHGV-1435867_16	COG2826	N/A	N/A	Transposase and inactivated derivatives, IS30 family	N/A
structural_annotation	UHGV-1435867_16	PF03400,PF13384,NF033563,COG2826	N/A	N/A	N/A	N/A
KOfam	UHGV-1435867_17	K07482	40.9	0.000000000025	K07482; transposase, IS30 family	N/A
PHROG	UHGV-1435867_17	phrog_11420	111.1	3.5e-33	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1435867_17	UniRef90_A0A173R7E2	90.5	5.75e-22	Transposase and inactivated derivatives, IS30 family	N/A
eggNOG-mapper	UHGV-1435867_17	411483.FAEPRAA2165_01868	90.5	1.87e-22	Helix-turn-helix domain	N/A
Pfam	UHGV-1435867_17	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
structural_annotation	UHGV-1435867_17	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_18	phrog_424	83.5	2.2e-24	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-1435867_18	693746.OBV_43240	568.0	0	N/A	N/A
COG	UHGV-1435867_18	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1435867_18	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_21	phrog_22040	60.5	2.2e-17	N/A	unknown function
structural_annotation	UHGV-1435867_21	PF07073,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_25	phrog_3584	261.7	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1435867_25	UniRef90_R6RCC6	191.0	0	Gp31	N/A
eggNOG-mapper	UHGV-1435867_25	536233.CLO_3655	182.0	0	N/A	N/A
structural_annotation	UHGV-1435867_25	PF21578,NF033538	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_27	phrog_986	96.2	2.5e-28	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1435867_27	UniRef90_A0A4Y6V279	91.3	2.83e-22	N/A	N/A
eggNOG-mapper	UHGV-1435867_27	1582152.A0A0A8WI22_9CAUD	79.7	7.05e-18	N/A	N/A
Pfam	UHGV-1435867_27	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-1435867_27	PF12961,MF_00684,NF003443,COG4043	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_28	phrog_824	151.0	2.8026e-45	N/A	unknown function
UniRef90	UHGV-1435867_28	UniRef90_A0A3R6I6C8	181.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1435867_28	397288.C806_00096	168.0	0	VRR_NUC	N/A
Pfam	UHGV-1435867_28	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1435867_28	PF08774	N/A	N/A	N/A	N/A
KOfam	UHGV-1435867_29	K03811	46.3	0.0000000000004	pnuC; nicotinamide mononucleotide transporter	N/A
Pfam	UHGV-1435867_29	PF04973	N/A	N/A	Nicotinamide mononucleotide transporter	NMN_transporter
PHROG	UHGV-1435867_30	phrog_31049	69.3	2.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-1435867_30	394503.Ccel_3053	80.5	3.88e-17	N/A	N/A
structural_annotation	UHGV-1435867_30	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_31	phrog_119	73.1	3.9e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1435867_31	UniRef90_A0A355JDC7	177.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1435867_31	315730.BcerKBAB4_3433	121.0	1.88e-34	HNH endonuclease	N/A
Pfam	UHGV-1435867_31	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1435867_31	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1435867_32	phrog_1066	50.8	0.0000000000000057	N/A	unknown function
eggNOG-mapper	UHGV-1435867_32	931276.Cspa_c10130	53.9	0.000000197	N/A	N/A
PHROG	UHGV-1435867_33	phrog_9	343.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1435867_33	UniRef90_A0A355JE04	961.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1435867_33	411468.CLOSCI_00551	805.0	0	COG COG4626 Phage terminase-like protein, large subunit	N/A
Pfam	UHGV-1435867_33	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1435867_33	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1435867_33	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1435867_33	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_34	phrog_12	184.0	0	portal protein	head and packaging
UniRef90	UHGV-1435867_34	UniRef90_A0A355JF89	656.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1435867_34	411468.CLOSCI_00550	460.0	0	Phage portal protein	N/A
Pfam	UHGV-1435867_34	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1435867_34	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1435867_34	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1435867_34	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1435867_35	K01358	139.3	3.59994e-41	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1435867_35	phrog_94	229.3	0	head maturation protease	head and packaging
UniRef90	UHGV-1435867_35	UniRef90_A0A355JF79	392.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1435867_35	1382358.JHVN01000024_gene1706	278.0	0	Serine dehydrogenase proteinase	N/A
Pfam	UHGV-1435867_35	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1435867_35	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1435867_35	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_36	phrog_10	119.2	4.5e-35	major head protein	head and packaging
UniRef90	UHGV-1435867_36	UniRef90_A0A355JDD3	565.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1435867_36	411468.CLOSCI_00548	414.0	0	Phage capsid family	N/A
Pfam	UHGV-1435867_36	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1435867_36	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1435867_36	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_37	phrog_5223	58.3	1e-16	neck protein	connector
UniRef90	UHGV-1435867_37	UniRef90_A0A174XIL0	98.6	6.08e-25	N/A	N/A
eggNOG-mapper	UHGV-1435867_37	411902.CLOBOL_03878	99.8	4.35e-26	N/A	N/A
PHROG	UHGV-1435867_38	phrog_1951	77.9	9.2e-23	head-tail adaptor	connector
UniRef90	UHGV-1435867_38	UniRef90_A0A355JF93	126.0	3.58e-36	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1435867_38	1111134.HMPREF1253_0380	52.4	0.000000159	head-tail adaptor	N/A
NCBIFam	UHGV-1435867_38	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1435867_38	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1435867_38	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1435867_39	UniRef90_UPI0003B47CD3	77.0	0.00000000000000146	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1435867_39	1415774.U728_1249	86.3	6.33e-20	N/A	N/A
structural_annotation	UHGV-1435867_39	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1435867_40	946235.CAER01000065_gene2439	56.6	0.00000000649	N/A	N/A
structural_annotation	UHGV-1435867_40	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_41	phrog_2175	80.9	1.1e-23	protein with Ig domain	other
UniRef90	UHGV-1435867_41	UniRef90_A0A401UUY1	244.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1435867_41	588581.Cpap_1267	211.0	0	N/A	N/A
Pfam	UHGV-1435867_41	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1435867_41	PF18316,PF09393,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1435867_42	phrog_29863	45.3	0.0000000000015	N/A	unknown function
eggNOG-mapper	UHGV-1435867_42	411468.CLOSCI_00542	70.9	0.0000000000000166	N/A	N/A
structural_annotation	UHGV-1435867_42	PF17388	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1435867_43	1415774.U728_1245	89.7	1.77e-22	N/A	N/A
PHROG	UHGV-1435867_44	phrog_1272	339.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1435867_44	UniRef90_A0A174XH68	541.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-1435867_44	411468.CLOSCI_00540	489.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1435867_44	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1435867_44	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1435867_45	1160721.RBI_I01575	64.7	0.0000000000219	Phage tail protein	N/A
COG	UHGV-1435867_45	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1435867_45	PF07157	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1435867	Yes	32,090	42	94	1
UHGV-0035767	No	35,318	41	100	1
UHGV-0095759	No	32,339	42	94	1
UHGV-0009589	No	31,222	43	91	1
UHGV-2180344	No	30,022	42	88	1
UHGV-0014358	No	28,985	43	85	1
UHGV-0001315	No	28,915	43	85	1
UHGV-0008314	No	25,493	43	75	1
UHGV-0001672	No	24,299	43	71	1
UHGV-0022950	No	23,087	43	68	1
UHGV-0030473	No	19,194	43	58	1
UHGV-1397286	No	18,136	42	55	1
UHGV-1440122	No	17,494	42	52	1
UHGV-0323287	No	17,138	42	51	1