vOTU vOTU-009172

vOTU: vOTU-009172

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-009172
Number of genomes	7
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea → Dorea formicigenerans
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00767 → vGENUS-01576 → vSUBGEN-05451 → vOTU-009172
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea → Dorea formicigenerans
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1871700
Biosample ID	N/A
Genome length (bp)	38,905 bps
CheckV completeness	99.90% (High-quality)
CDS count	57
CDS density	91.44%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea → Dorea formicigenerans	Total connections	24	Host agreement	87.5
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea → Dorea formicigenerans	Total connections	16	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1871700_1	411461.DORFOR_01165	80.5	1.71e-19	N/A	N/A
PHROG	UHGV-1871700_2	phrog_581	283.7	0	minor head protein	head and packaging
UniRef90	UHGV-1871700_2	UniRef90_A0A173RCB2	860.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1871700_2	411461.DORFOR_01164	1143.0	0	N/A	N/A
Pfam	UHGV-1871700_2	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1871700_2	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1871700_2	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_3	phrog_533	330.0	0	portal protein	head and packaging
UniRef90	UHGV-1871700_3	UniRef90_B0G4H6	897.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1871700_3	411461.DORFOR_01163	897.0	0	N/A	N/A
structural_annotation	UHGV-1871700_3	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1871700_4	K06909	447.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1871700_4	phrog_2606	334.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-1871700_4	UniRef90_B0G4H5	1325.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1871700_4	411461.DORFOR_01162	1325.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1871700_4	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-1871700_4	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-1871700_4	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-1871700_4	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1871700_4	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1871700_4	PF04466,PF17288,PF06056,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_5	phrog_11237	116.4	2.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-1871700_5	411461.DORFOR_01161	281.0	0	N/A	N/A
PHROG	UHGV-1871700_9	phrog_15198	44.0	0.0000000000036	N/A	unknown function
UniRef90	UHGV-1871700_9	UniRef90_A0A8B3AJ13	228.0	0	N/A	N/A
eggNOG-mapper	UHGV-1871700_9	1256908.HMPREF0373_00667	90.9	6.4e-22	N/A	N/A
Pfam	UHGV-1871700_9	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1871700_10	PF09297,MF_00327	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_11	phrog_26445	40.9	0.000000000009	N/A	unknown function
UniRef90	UHGV-1871700_11	UniRef90_A0A8B3AJ48	243.0	0	AsnC family protein	N/A
structural_annotation	UHGV-1871700_11	PF00196,TIGR04381,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_12	phrog_38110	117.6	3.5e-35	N/A	unknown function
PHROG	UHGV-1871700_13	phrog_31991	112.5	1.9e-33	N/A	unknown function
structural_annotation	UHGV-1871700_14	PF08169,MF_01549,TIGR00405	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_15	phrog_7566	101.3	5.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-1871700_15	411461.DORFOR_01145	259.0	0	N/A	N/A
KOfam	UHGV-1871700_16	K03497	133.5	2.5e-39	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1871700_16	phrog_6218	191.1	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1871700_16	UniRef90_B0G4F7	869.0	0	ParB-like protein	N/A
eggNOG-mapper	UHGV-1871700_16	411461.DORFOR_01144	869.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-1871700_16	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-1871700_16	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-1871700_16	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1871700_16	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_17	phrog_424	77.8	1.4e-22	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1871700_17	UniRef90_A0A2H4JC51	608.0	0	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	N/A
eggNOG-mapper	UHGV-1871700_17	411461.DORFOR_01142	847.0	0	N/A	N/A
COG	UHGV-1871700_17	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1871700_17	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_19	phrog_531	48.0	0.00000000000026	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1871700_19	UniRef90_A0A1M6MV17	147.0	9.73902e-43	Ribonuclease HI	N/A
eggNOG-mapper	UHGV-1871700_19	411461.DORFOR_01140	283.0	0	RNA-DNA hybrid ribonuclease activity	N/A
COG	UHGV-1871700_19	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1871700_19	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_21	phrog_3584	165.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1871700_21	1280698.AUJS01000007_gene1013	417.0	0	N/A	N/A
structural_annotation	UHGV-1871700_21	PF01446	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_24	phrog_36464	61.5	1.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-1871700_24	411461.DORFOR_01136	146.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-1871700_24	PF09035	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1871700_25	1095750.HMPREF9970_1010	46.2	0.00000568	N/A	N/A
KOfam	UHGV-1871700_29	K22300	52.5	0.000000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1871700_29	phrog_8	41.5	0.00000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-1871700_29	UniRef90_A0A413QMZ1	269.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1871700_29	471875.RUMLAC_01755	104.0	5.06e-27	sequence-specific DNA binding	N/A
Pfam	UHGV-1871700_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1871700_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1871700_29	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1871700_31	K23779	41.2	0.000000000038	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-1871700_31	phrog_3	44.2	0.0000000000081	transcriptional repressor	transcription regulation
UniRef90	UHGV-1871700_31	UniRef90_B0G4E1	126.0	1.34e-36	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1871700_31	411461.DORFOR_01128	126.0	2.24e-37	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1871700_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
UniRef90	UHGV-1871700_32	UniRef90_A0A173VJ11	328.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-1871700_32	411461.DORFOR_01127	514.0	0	N/A	N/A
structural_annotation	UHGV-1871700_32	PF11611,PF03843,MF_00791,MF_01959,TIGR03943,NF003465,COG3065,COG2967	N/A	N/A	N/A	N/A
KOfam	UHGV-1871700_33	K14059	176.7	0	int; integrase	N/A
PHROG	UHGV-1871700_33	phrog_1	156.5	0	integrase	integration and excision
UniRef90	UHGV-1871700_33	UniRef90_B0G4D9	693.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-1871700_33	411461.DORFOR_01126	693.0	0	Phage integrase family	N/A
Pfam	UHGV-1871700_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1871700_33	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1871700_33	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1871700_34	K07729	44.9	0.0000000000024	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1871700_34	phrog_8	70.4	4.2e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1871700_34	UniRef90_UPI000CFA3B30	129.0	1.85e-37	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1871700_34	411461.DORFOR_01188	93.6	6.47e-24	transcriptional regulator, XRE family	N/A
Pfam	UHGV-1871700_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1871700_34	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-1871700_35	phrog_2742	83.8	2.6e-24	endolysin	lysis
UniRef90	UHGV-1871700_35	UniRef90_A0A415H551	790.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1871700_35	411462.DORLON_00764	241.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1871700_35	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1871700_35	PF07538	N/A	N/A	Clostridial hydrophobic W	ChW
COG	UHGV-1871700_35	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1871700_35	PF01520,TIGR02883,COG5492,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_36	phrog_37799	67.8	6.5e-20	N/A	unknown function
UniRef90	UHGV-1871700_36	UniRef90_A0A3E5GSW8	274.0	0	Protein utxA	N/A
eggNOG-mapper	UHGV-1871700_36	610130.Closa_1414	135.0	4.44e-39	toxin secretion phage lysis holin	N/A
Pfam	UHGV-1871700_36	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1871700_36	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1871700_36	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1871700_36	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
UniRef90	UHGV-1871700_37	UniRef90_A0A415H5B1	286.0	0	ArsR family transcriptional regulator	N/A
structural_annotation	UHGV-1871700_37	PF01978,MF_01909,NF033788,COG1675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1871700_38	476272.RUMHYD_00002	126.0	1.7e-27	N/A	N/A
eggNOG-mapper	UHGV-1871700_40	411461.DORFOR_01181	97.4	2.45e-26	N/A	N/A
PHROG	UHGV-1871700_41	phrog_12931	107.5	7e-32	N/A	unknown function
eggNOG-mapper	UHGV-1871700_41	742765.HMPREF9457_03370	240.0	0	N/A	N/A
structural_annotation	UHGV-1871700_42	PF16323	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_43	phrog_19111	62.7	3.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-1871700_43	1232443.BAIA02000078_gene14	77.0	0.00000000000222	nuclear chromosome segregation	N/A
COG	UHGV-1871700_43	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1871700_44	phrog_13141	140.6	9.6003e-42	N/A	unknown function
UniRef90	UHGV-1871700_44	UniRef90_UPI00156D68EE	258.0	0	H-type lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-1871700_44	411461.DORFOR_01178	316.0	0	N/A	N/A
structural_annotation	UHGV-1871700_44	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_45	phrog_538	191.3	0	minor tail protein	tail
UniRef90	UHGV-1871700_45	UniRef90_UPI001E2C8064	313.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1871700_45	411461.DORFOR_01177	638.0	0	N/A	N/A
structural_annotation	UHGV-1871700_45	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_46	phrog_33	48.2	0.00000000000028	distal tail protein Dit	tail
UniRef90	UHGV-1871700_46	UniRef90_UPI0015709E93	288.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1871700_46	411461.DORFOR_01176	530.0	0	N/A	N/A
structural_annotation	UHGV-1871700_46	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_47	phrog_19074	479.0	0	N/A	unknown function
UniRef90	UHGV-1871700_47	UniRef90_A0A413QNB2	1816.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1871700_47	411461.DORFOR_01175	1862.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1871700_47	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1871700_47	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1871700_47	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1871700_47	PF10145,TIGR01760,NF011901	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_48	phrog_706	156.2	0	N/A	unknown function
UniRef90	UHGV-1871700_48	UniRef90_B0G4I7	399.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1871700_48	411461.DORFOR_01174	399.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1871700_48	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1871700_48	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_49	phrog_4450	60.9	2.7e-17	N/A	unknown function
UniRef90	UHGV-1871700_49	UniRef90_A0A7X3SKC0	103.0	2.45e-26	AP endonuclease	N/A
eggNOG-mapper	UHGV-1871700_49	931276.Cspa_c07520	55.1	0.0000000393	N/A	N/A
Pfam	UHGV-1871700_49	PF20378	N/A	N/A	N/A	DUF6673
PHROG	UHGV-1871700_50	phrog_820	98.5	6e-29	major tail protein	tail
UniRef90	UHGV-1871700_50	UniRef90_A0A412UWV6	251.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1871700_50	411461.DORFOR_01172	333.0	0	N/A	N/A
structural_annotation	UHGV-1871700_50	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_51	phrog_3266	77.6	1.6e-22	tail completion	connector
structural_annotation	UHGV-1871700_51	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_52	phrog_556	61.8	1e-17	minor head protein	head and packaging
UniRef90	UHGV-1871700_52	UniRef90_UPI001E609FF9	218.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1871700_52	411461.DORFOR_01170	283.0	0	Minor capsid protein	N/A
Pfam	UHGV-1871700_52	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1871700_52	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_53	phrog_3366	95.1	7.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-1871700_53	573061.Clocel_3539	65.5	0.0000000000133	N/A	N/A
Pfam	UHGV-1871700_53	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1871700_53	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_54	phrog_541	80.4	2.2e-23	head-tail adaptor	connector
eggNOG-mapper	UHGV-1871700_54	411902.CLOBOL_00133	67.0	0.00000000000153	N/A	N/A
PHROG	UHGV-1871700_55	phrog_283	202.3	0	major head protein	head and packaging
UniRef90	UHGV-1871700_55	UniRef90_A0A173REC9	547.0	0	p22 coat protein-gene protein 5	N/A
eggNOG-mapper	UHGV-1871700_55	411461.DORFOR_01167	652.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-1871700_55	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-1871700_55	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1871700_56	phrog_194	97.6	1.6e-28	head scaffolding protein	head and packaging
UniRef90	UHGV-1871700_56	UniRef90_A0A173RCF7	237.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1871700_56	411461.DORFOR_01166	389.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1871700_56	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1871700_56	PF06810,MF_02110	N/A	N/A	N/A	N/A
UniRef90	UHGV-1871700_57	UniRef90_UPI0019572D92	70.1	0.0000000000000192	N/A	N/A
eggNOG-mapper	UHGV-1871700_57	411461.DORFOR_01165	103.0	1.3e-28	N/A	N/A
structural_annotation	UHGV-1871700_57	PF14359,NF010124	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1871700	Yes	38,905	42	100	1
UHGV-1487331	No	36,674	42	97	1
UHGV-0062738	No	36,590	42	96	1
UHGV-1426985	No	36,590	42	96	1
UHGV-0156807	No	34,550	42	91	1
UHGV-2098832	No	14,444	43	41	1
UHGV-1642420	No	15,502	42	40	1