vOTU vOTU-009385

vOTU: vOTU-009385

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-009385
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00740 → vGENUS-01036 → vSUBGEN-26155 → vOTU-009385
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Host range breadth	Order
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1378690
Biosample ID	N/A
Genome length (bp)	36,239 bps
CheckV completeness	97.72% (High-quality)
CDS count	65
CDS density	93.21%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	85	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1378690_1	phrog_16490	133.7	1.8e-39	N/A	unknown function
eggNOG-mapper	UHGV-1378690_1	1408437.JNJN01000043_gene803	169.0	0	N/A	N/A
PHROG	UHGV-1378690_2	phrog_22984	87.8	8.9e-26	N/A	unknown function
PHROG	UHGV-1378690_3	phrog_21718	92.0	5.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-1378690_3	397290.C810_05210	79.3	8.76e-17	N/A	N/A
PHROG	UHGV-1378690_4	phrog_3754	92.4	3.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-1378690_4	476272.RUMHYD_01764	149.0	4.2039e-45	N/A	N/A
UniRef90	UHGV-1378690_5	UniRef90_A0A8D9PDT6	69.7	0.0000000000000829	Transcriptional regulatory protein	N/A
PHROG	UHGV-1378690_6	phrog_608	64.1	2.3e-18	holin	lysis
UniRef90	UHGV-1378690_6	UniRef90_UPI0019604BA7	79.0	9.04e-17	phage holin, LLH family	N/A
eggNOG-mapper	UHGV-1378690_6	1121472.AQWN01000009_gene420	59.7	0.000000000502	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1378690_6	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1378690_6	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_7	phrog_37604	79.3	3.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-1378690_7	585501.HMPREF6123_0817	72.8	0.0000000000000213	N/A	N/A
PHROG	UHGV-1378690_8	phrog_21357	106.0	2.7e-31	endolysin	lysis
UniRef90	UHGV-1378690_8	UniRef90_UPI001C0141B9	228.0	0	glucosaminidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1378690_8	243164.DET1070	223.0	0	SMART Glycoside hydrolase, family 25 subgroup	N/A
Pfam	UHGV-1378690_8	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1378690_8	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1378690_8	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1378690_8	PF10030,TIGR02594,COG4322	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_10	phrog_9534	119.9	2.4e-35	head protein	head and packaging
eggNOG-mapper	UHGV-1378690_10	748224.HMPREF9436_00702	89.4	3.49e-17	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-1378690_10	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_11	phrog_538	100.6	1.5e-29	minor tail protein	tail
UniRef90	UHGV-1378690_11	UniRef90_UPI001C113FEF	346.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1378690_11	931626.Awo_c30930	65.9	0.00000000411	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-1378690_11	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1378690_11	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_12	phrog_36410	65.6	5.6e-19	N/A	unknown function
UniRef90	UHGV-1378690_12	UniRef90_UPI001C0FCFFA	362.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1378690_12	411471.SUBVAR_06982	105.0	9.69e-24	Phage tail protein	N/A
structural_annotation	UHGV-1378690_12	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_13	phrog_23464	258.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1378690_13	665950.HMPREF1025_02660	261.0	0	phage tail tape measure protein	N/A
COG	UHGV-1378690_13	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1378690_13	PF20155,MF_04138	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_15	phrog_885	71.2	1.2e-20	major tail protein	tail
UniRef90	UHGV-1378690_15	UniRef90_A0A843J9F0	201.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1378690_15	1504822.CCNO01000012_gene492	228.0	0	N/A	N/A
structural_annotation	UHGV-1378690_15	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1378690_16	PF11367	N/A	N/A	N/A	N/A
Pfam	UHGV-1378690_17	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1378690_17	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1378690_17	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_19	phrog_267	185.2	0	major head protein	head and packaging
UniRef90	UHGV-1378690_19	UniRef90_A0A3Q9B9E4	261.0	0	P22 coat protein-protein 5 domain protein	N/A
eggNOG-mapper	UHGV-1378690_19	877414.ATWA01000001_gene909	261.0	0	P22 coat protein-protein 5 domain protein	N/A
Pfam	UHGV-1378690_19	PF19821	N/A	N/A	Phage capsid protein	Phage_capsid_2
structural_annotation	UHGV-1378690_19	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1378690_20	UniRef90_A0A6B9SU02	91.7	1.57e-19	Fibronectin autolysin	N/A
structural_annotation	UHGV-1378690_20	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_21	phrog_5	67.0	3.5e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-1378690_21	UniRef90_UPI0015C5E40B	71.6	0.000000000000337	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1378690_21	683837.lse_1605	60.8	0.000000000732	N/A	N/A
Pfam	UHGV-1378690_21	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1378690_21	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_23	phrog_2468	103.9	2.2e-30	head morphogenesis	head and packaging
UniRef90	UHGV-1378690_23	UniRef90_A0A4D7AUA1	341.0	0	Phage head morphogenesis protein	N/A
eggNOG-mapper	UHGV-1378690_23	1504822.CCNO01000013_gene286	147.0	1.72e-35	cell adhesion	N/A
Pfam	UHGV-1378690_23	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1378690_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1378690_23	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_24	phrog_64	162.9	0	portal protein	head and packaging
UniRef90	UHGV-1378690_24	UniRef90_UPI0018A8A301	602.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1378690_24	673376.F2VHW1_9CAUD	211.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1378690_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1378690_24	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_25	phrog_38	162.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1378690_25	UniRef90_UPI00046F67CE	409.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-1378690_25	1140001.I571_01829	413.0	0	N/A	N/A
structural_annotation	UHGV-1378690_25	PF17289,PF05876,MF_04147,NF033889,COG5323	N/A	N/A	N/A	N/A
KOfam	UHGV-1378690_26	K07474	139.4	3.80004e-41	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1378690_26	phrog_51	140.2	9.99967e-42	terminase small subunit	head and packaging
UniRef90	UHGV-1378690_26	UniRef90_A0A1I5G7W6	161.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1378690_26	445971.ANASTE_00710	134.0	2.03e-38	Terminase small subunit	N/A
Pfam	UHGV-1378690_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1378690_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1378690_26	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_27	phrog_36	42.9	0.0000000000082	transcriptional regulator	transcription regulation
UniRef90	UHGV-1378690_27	UniRef90_UPI001C10AB33	67.4	0.0000000000204	N/A	N/A
eggNOG-mapper	UHGV-1378690_27	428125.CLOLEP_01806	50.8	0.0000078	N/A	N/A
structural_annotation	UHGV-1378690_27	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_34	phrog_22543	46.7	0.00000000000022	N/A	unknown function
PHROG	UHGV-1378690_38	phrog_374	77.9	4.40008e-43	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1378690_38	UniRef90_UPI0006D56AE3	108.0	1.3e-25	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1378690_38	478749.BRYFOR_05054	114.0	6.03e-28	AP2 domain protein	N/A
structural_annotation	UHGV-1378690_38	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_39	phrog_1770	105.7	4.1e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1378690_39	UniRef90_A0A533R9G2	109.0	1.17e-27	Holliday junction endonuclease	N/A
eggNOG-mapper	UHGV-1378690_39	195253.Syn6312_0894	97.1	9.18e-24	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	N/A
COG	UHGV-1378690_39	COG0817	N/A	N/A	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	N/A
structural_annotation	UHGV-1378690_39	PF16921,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1378690_41	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_42	phrog_16304	88.2	7e-26	N/A	unknown function
UniRef90	UHGV-1378690_42	UniRef90_UPI001E560709	127.0	1.32e-32	N/A	N/A
eggNOG-mapper	UHGV-1378690_42	755731.Clo1100_1616	66.6	0.000000000276	Phage replisome organizer	N/A
Pfam	UHGV-1378690_42	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1378690_42	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1378690_42	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1378690_43	K03111	129.3	4.9e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1378690_43	phrog_44	116.2	3.2e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1378690_43	UniRef90_A0A1W1YRF9	134.0	4.27e-38	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1378690_43	693746.OBV_19910	127.0	3.33e-36	Single-strand binding protein family	N/A
Pfam	UHGV-1378690_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1378690_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1378690_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1378690_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1378690_43	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_44	phrog_7370	64.7	1.2e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1378690_44	UniRef90_UPI000933A555	134.0	8.84e-39	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1378690_44	445972.ANACOL_01826	94.4	8.2e-24	HNH nucleases	N/A
Pfam	UHGV-1378690_44	PF01844	N/A	N/A	HNH endonuclease	HNH
KOfam	UHGV-1378690_45	K00571	106.4	3.7e-31	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1378690_45	phrog_67	101.9	3.5e-31	DNA methyltransferase	other
UniRef90	UHGV-1378690_45	UniRef90_A0A0E1KQR8	416.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1378690_45	749222.Nitsa_1817	405.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1378690_45	MTase_II_00157	89.5	3.9e-27	Type II methyltransferase	RM
Pfam	UHGV-1378690_45	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1378690_45	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1378690_45	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
UniRef90	UHGV-1378690_46	UniRef90_A0A8D9PDS2	140.0	4.57e-39	NinB protein	N/A
eggNOG-mapper	UHGV-1378690_46	1507.HMPREF0262_00432	97.8	2.46e-23	N/A	N/A
structural_annotation	UHGV-1378690_46	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_47	phrog_155	83.5	3e-24	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1378690_47	UniRef90_UPI0018AC33A4	191.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1378690_47	1497679.EP56_08440	76.3	0.0000000000000292	ERF superfamily	N/A
Pfam	UHGV-1378690_47	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1378690_47	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_56	phrog_8	47.5	0.00000000000037	transcriptional regulator	transcription regulation
UniRef90	UHGV-1378690_56	UniRef90_A0A374HKJ0	82.8	1.97e-18	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1378690_56	97138.C820_00203	72.4	0.0000000000000112	Transcriptional	N/A
Pfam	UHGV-1378690_56	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1378690_56	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1378690_56	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_58	phrog_5610	61.9	5.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-1378690_58	1238184.CM001792_gene1700	113.0	2.17e-27	N/A	N/A
Pfam	UHGV-1378690_58	PF16729	N/A	N/A	N/A	DUF5067
COG	UHGV-1378690_58	COG3170	N/A	N/A	Type IV pilus assembly protein FimV	N/A
eggNOG-mapper	UHGV-1378690_59	428127.EUBDOL_00130	52.4	0.00000253	sequence-specific DNA binding	N/A
COG	UHGV-1378690_59	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1378690_59	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1378690_60	K06400	361.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1378690_60	phrog_95	343.8	0	integrase	integration and excision
UniRef90	UHGV-1378690_60	UniRef90_UPI00106696FE	390.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1378690_60	665956.HMPREF1032_03589	395.0	0	N/A	N/A
Pfam	UHGV-1378690_60	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1378690_60	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1378690_60	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1378690_60	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1378690_60	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1378690_62	K07726	46.5	0.00000000000066	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-1378690_62	phrog_2104	46.8	0.00000000000049	N/A	unknown function
UniRef90	UHGV-1378690_62	UniRef90_A0A414P8A6	65.5	0.000000000000906	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1378690_62	471875.RUMLAC_02311	64.3	0.000000000000414	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1378690_62	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1378690_62	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1378690_62	PF15731,NF007481,COG2944	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1378690_63	1226322.HMPREF1545_00079	93.2	3.72e-23	N/A	N/A
eggNOG-mapper	UHGV-1378690_64	476272.RUMHYD_01772	51.6	0.0000037	N/A	N/A
structural_annotation	UHGV-1378690_64	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1378690_65	phrog_20016	190.5	0	N/A	unknown function
UniRef90	UHGV-1378690_65	UniRef90_A0A285PT46	195.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1378690_65	1226322.HMPREF1545_00077	167.0	0	N/A	N/A
structural_annotation	UHGV-1378690_65	PF18573,NF033147	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1378690	Yes	36,239	56	98	1
UHGV-0187685	No	36,131	56	97	1
UHGV-0069473	No	33,677	56	91	1
UHGV-2018685	No	23,259	54	62	1
UHGV-2024550	No	12,909	58	35	1