vOTU vOTU-009948

vOTU: vOTU-009948

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-009948
Number of genomes	8
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00089 → vSUBGEN-29813 → vOTU-009948
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0133260
Biosample ID	SAMN02334074
Genome length (bp)	41,098 bps
CheckV completeness	97.96% (High-quality)
CDS count	57
CDS density	93.43%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	195	Host agreement	90.26
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	22	Host agreement	77.27

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0133260_2	phrog_937	62.9	6.3e-18	hemolysin	other
eggNOG-mapper	UHGV-0133260_2	1519439.JPJG01000023_gene533	79.7	3.1e-18	N/A	N/A
PHROG	UHGV-0133260_3	phrog_37900	44.3	0.0000000000016	N/A	unknown function
UniRef90	UHGV-0133260_3	UniRef90_R5IRZ6	351.0	0	N/A	N/A
eggNOG-mapper	UHGV-0133260_3	1519439.JPJG01000060_gene1894	235.0	0	N/A	N/A
Pfam	UHGV-0133260_3	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0133260_3	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0133260_3	PF19789,PF13620,NF033708	N/A	N/A	N/A	N/A
KOfam	UHGV-0133260_4	K16628	204.5	0	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0133260_4	phrog_819	135.6	0	tail protein	tail
eggNOG-mapper	UHGV-0133260_4	1519439.JPJG01000060_gene1892	81.3	0.000000000000459	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0133260_4	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0133260_4	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0133260_4	PF06903	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0133260_5	PF18962,NF011773	N/A	N/A	N/A	N/A
PHROG	UHGV-0133260_6	phrog_22978	121.9	1.19993e-41	N/A	unknown function
eggNOG-mapper	UHGV-0133260_6	1408437.JNJN01000039_gene389	476.0	0	heme binding	N/A
Pfam	UHGV-0133260_6	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
COG	UHGV-0133260_6	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
UniRef90	UHGV-0133260_7	UniRef90_R5DCX9	182.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0133260_7	1410650.JHWL01000003_gene2815	136.0	4.22e-33	N/A	N/A
PHROG	UHGV-0133260_8	phrog_12105	122.5	2.2e-36	N/A	unknown function
eggNOG-mapper	UHGV-0133260_8	1519439.JPJG01000060_gene1891	70.1	0.0000000000000989	N/A	N/A
PHROG	UHGV-0133260_10	phrog_1357	216.8	0	major head protein	head and packaging
UniRef90	UHGV-0133260_10	UniRef90_A0A2V2CFL5	401.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0133260_10	1410650.JHWL01000003_gene2830	276.0	0	N/A	N/A
Pfam	UHGV-0133260_10	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0133260_10	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0133260_10	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0133260_11	phrog_13908	149.6	1.96182e-44	N/A	unknown function
eggNOG-mapper	UHGV-0133260_11	1410650.JHWL01000003_gene2831	105.0	7.11e-24	N/A	N/A
PHROG	UHGV-0133260_12	phrog_156	291.1	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0133260_12	1410650.JHWL01000003_gene2833	536.0	0	N/A	N/A
structural_annotation	UHGV-0133260_12	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0133260_16	phrog_511	232.8	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0133260_16	1410650.JHWL01000003_gene2827	319.0	0	N/A	N/A
structural_annotation	UHGV-0133260_16	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-0133260_17	K06909	145.9	3.60134e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0133260_17	phrog_979	134.5	4.99997e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0133260_17	UniRef90_A0A810Q5R0	643.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0133260_17	1410650.JHWL01000003_gene2834	639.0	0	N/A	N/A
Pfam	UHGV-0133260_17	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0133260_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0133260_17	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0133260_18	phrog_606	67.9	1.7e-19	terminase small subunit	head and packaging
UniRef90	UHGV-0133260_18	UniRef90_UPI001F487344	123.0	3.18e-33	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0133260_18	397290.C810_05185	125.0	1.13e-34	DNA-packaging protein gp3	N/A
Pfam	UHGV-0133260_18	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0133260_18	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0133260_19	phrog_3584	113.6	1.6e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0133260_19	537013.CLOSTMETH_02141	69.3	0.0000000000125	N/A	N/A
structural_annotation	UHGV-0133260_19	PF21578,MF_00360	N/A	N/A	N/A	N/A
KOfam	UHGV-0133260_20	K07319	107.6	8.7e-34	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0133260_20	phrog_67	108.6	5e-33	DNA methyltransferase	other
UniRef90	UHGV-0133260_20	UniRef90_UPI001E30CE28	273.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0133260_20	1125725.HMPREF1325_1312	213.0	0	N-4 methylation of cytosine	N/A
PADLOC	UHGV-0133260_20	MTase_II_00172	122.2	5.6e-36	Type II methyltransferase	RM
Pfam	UHGV-0133260_20	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0133260_20	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0133260_20	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0133260_21	phrog_2245	79.7	3.5e-23	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0133260_21	UniRef90_A0A4U9RLZ8	69.3	0.00000000000196	N/A	N/A
eggNOG-mapper	UHGV-0133260_21	1567010.A0A0A7RU90_9VIRU	63.9	0.00000000011	protein disulfide oxidoreductase activity	N/A
structural_annotation	UHGV-0133260_21	PF08271	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0133260_23	PF10013	N/A	N/A	N/A	N/A
PHROG	UHGV-0133260_25	phrog_190	108.2	7.3e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0133260_25	UniRef90_UPI0006C2AC63	125.0	7.22e-34	N/A	N/A
eggNOG-mapper	UHGV-0133260_25	693746.OBV_25250	121.0	4.18e-33	N/A	N/A
Pfam	UHGV-0133260_25	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0133260_25	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0133260_29	phrog_38832	70.0	1.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-0133260_29	1232443.BAIA02000078_gene48	113.0	2.48e-30	N/A	N/A
PHROG	UHGV-0133260_30	phrog_3136	112.4	2.5e-33	N/A	unknown function
UniRef90	UHGV-0133260_30	UniRef90_A0A3D0HBD2	111.0	1.11e-28	ASCH domain-containing protein	N/A
Pfam	UHGV-0133260_30	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0133260_30	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0133260_30	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
Pfam	UHGV-0133260_32	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0133260_32	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0133260_33	phrog_424	75.8	5.4e-22	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0133260_33	445972.ANACOL_01819	498.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-0133260_33	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0133260_33	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0133260_37	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0133260_38	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0133260_41	PF10548	N/A	N/A	N/A	N/A
UniRef90	UHGV-0133260_47	UniRef90_A0A3R5Z350	77.0	6.91e-16	XRE family transcriptional regulator	N/A
Pfam	UHGV-0133260_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0133260_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0133260_47	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
COG	UHGV-0133260_48	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
Pfam	UHGV-0133260_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0133260_50	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0133260_50	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0133260_51	K14059	208.2	0	int; integrase	N/A
PHROG	UHGV-0133260_51	phrog_1	197.2	0	integrase	integration and excision
UniRef90	UHGV-0133260_51	UniRef90_A0A212JT52	255.0	0	Putative Integrase family protein	N/A
eggNOG-mapper	UHGV-0133260_51	1507.HMPREF0262_00307	201.0	0	Phage integrase family	N/A
Pfam	UHGV-0133260_51	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0133260_51	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0133260_51	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0133260_51	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0133260_52	UniRef90_A0A7M1RTM1	77.0	0.0000000000000162	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0133260_52	1378168.N510_03079	65.9	0.000000000101	N/A	N/A
structural_annotation	UHGV-0133260_53	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0133260_54	phrog_16490	53.9	0.000000000000004	N/A	unknown function
UniRef90	UHGV-0133260_56	UniRef90_UPI00189B2CE2	225.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0133260_56	525254.HMPREF0072_1273	223.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0133260_56	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0133260_56	NF033743	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0133260	Yes	41,098	58	98	1
UHGV-1519857	No	43,426	58	100	1
UHGV-1400691	No	38,925	58	93	1
UHGV-1426804	No	35,780	58	85	1
UHGV-1467328	No	35,640	58	85	1
UHGV-1405784	No	28,640	59	68	1
UHGV-1798431	No	13,584	58	33	1
UHGV-1805343	No	12,756	58	31	1