vOTU vOTU-010130

vOTU: vOTU-010130

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-010130
Number of genomes	9
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Anaerostipes → Anaerostipes hadrus
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-01103 → vGENUS-03511 → vSUBGEN-01902 → vOTU-010130
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Anaerostipes → Anaerostipes hadrus
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0007155
Biosample ID	SAMEA4766095
Genome length (bp)	38,155 bps
CheckV completeness	99.90% (High-quality)
CDS count	49
CDS density	89.65%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Anaerostipes → Anaerostipes hadrus	Total connections	399	Host agreement	76.69
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Anaerostipes → Anaerostipes hadrus	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0007155_1	phrog_443	59.9	7.2e-17	holin	lysis
UniRef90	UHGV-0007155_1	UniRef90_UPI001BA9F6DF	118.0	2.7e-33	holin	N/A
eggNOG-mapper	UHGV-0007155_1	1235802.C823_05612	95.9	3.26e-25	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0007155_1	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0007155_1	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_2	phrog_937	72.5	5.6e-21	hemolysin	other
eggNOG-mapper	UHGV-0007155_2	411459.RUMOBE_01081	117.0	3.66e-32	N/A	N/A
UniRef90	UHGV-0007155_3	UniRef90_A0A417WCN8	79.7	0.0000000000000272	Acyl carrier protein	N/A
eggNOG-mapper	UHGV-0007155_3	1297617.JPJD01000014_gene875	78.6	0.0000000000000093	N/A	N/A
structural_annotation	UHGV-0007155_3	PF14301	N/A	N/A	N/A	N/A
KOfam	UHGV-0007155_4	K00986	133.1	2.9e-39	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0007155_4	phrog_1423	244.8	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007155_4	UniRef90_A0A3D5EUG8	446.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0007155_4	742722.HMPREF9463_00262	293.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0007155_4	icity0040	103.9	2.7e-30	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0007155_4	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0007155_4	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0007155_4	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0007155_5	PF05635,NF008911	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_6	phrog_14959	101.7	0	N/A	unknown function
UniRef90	UHGV-0007155_6	UniRef90_UPI000F63139C	879.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007155_6	657322.FPR_22010	871.0	0	N/A	N/A
Pfam	UHGV-0007155_6	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0007155_6	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0007155_6	PF19789,PF08757,PF13385,PF02010,MF_04116,NF011735,NF033188,COG3121	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_7	phrog_13289	383.6	0	tail protein	tail
UniRef90	UHGV-0007155_7	UniRef90_A0A1C6ES47	640.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0007155_7	1235798.C817_02568	464.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0007155_7	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0007155_7	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0007155_7	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-0007155_7	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_8	phrog_33	95.7	8.5e-28	distal tail protein Dit	tail
UniRef90	UHGV-0007155_8	UniRef90_UPI00138FB3D0	247.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0007155_8	1235798.C817_04593	226.0	0	phage tail	N/A
Pfam	UHGV-0007155_8	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0007155_8	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0007155_8	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0007155_8	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_9	phrog_58	253.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0007155_9	UniRef90_A0A1H0WFV4	354.0	0	Phage-related minor tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-0007155_9	476272.RUMHYD_01482	237.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0007155_9	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0007155_9	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0007155_9	PF10145,MF_04138,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_10	phrog_3033	43.3	0.0000000000058	N/A	unknown function
eggNOG-mapper	UHGV-0007155_10	1341157.RF007C_02605	50.4	0.0000000375	N/A	N/A
PHROG	UHGV-0007155_11	phrog_709	120.5	8.1e-36	N/A	unknown function
eggNOG-mapper	UHGV-0007155_11	879305.HMPREF9290_0132	136.0	5.21e-40	N/A	N/A
structural_annotation	UHGV-0007155_11	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_12	phrog_88	188.5	0	major tail protein	tail
UniRef90	UHGV-0007155_12	UniRef90_A0A3E3ILX6	240.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0007155_12	658088.HMPREF0987_01114	237.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0007155_12	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0007155_12	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_13	phrog_78	53.4	0.0000000000000051	tail terminator	connector
eggNOG-mapper	UHGV-0007155_13	610130.Closa_0748	115.0	4.75e-32	N/A	N/A
structural_annotation	UHGV-0007155_13	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_14	phrog_5	53.3	0.0000000000000077	tail completion or Neck1 protein	connector
UniRef90	UHGV-0007155_14	UniRef90_D9R5G6	109.0	1.36e-28	Prophage pi2 protein 37	N/A
eggNOG-mapper	UHGV-0007155_14	610130.Closa_0747	109.0	2.28e-29	COG NOG18351 non supervised orthologous group	N/A
Pfam	UHGV-0007155_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0007155_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_15	phrog_19734	62.6	5e-18	N/A	unknown function
UniRef90	UHGV-0007155_15	UniRef90_UPI001EE7A060	80.9	1.93e-17	phage head closure protein	N/A
eggNOG-mapper	UHGV-0007155_15	1235792.C808_00088	108.0	8.51e-29	N/A	N/A
structural_annotation	UHGV-0007155_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_16	phrog_749	72.6	4.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0007155_16	1235792.C808_00087	110.0	1.55e-30	N/A	N/A
PHROG	UHGV-0007155_17	phrog_10	130.7	1.6e-38	major head protein	head and packaging
UniRef90	UHGV-0007155_17	UniRef90_A0A3E4M759	590.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0007155_17	1235792.C808_00086	536.0	0	Phage capsid family	N/A
Pfam	UHGV-0007155_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0007155_17	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0007155_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0007155_17	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0007155_17	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0007155_18	K01358	119.0	5.5e-35	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0007155_18	phrog_94	196.3	0	head maturation protease	head and packaging
UniRef90	UHGV-0007155_18	UniRef90_D9R5G2	276.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0007155_18	610130.Closa_0743	276.0	0	Clp protease	N/A
Pfam	UHGV-0007155_18	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0007155_18	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0007155_18	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_19	phrog_12	123.7	9.8e-37	portal protein	head and packaging
UniRef90	UHGV-0007155_19	UniRef90_A0A4V2UQ51	507.0	0	HK97 family phage portal protein	N/A
eggNOG-mapper	UHGV-0007155_19	610130.Closa_0742	456.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0007155_19	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0007155_19	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0007155_19	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0007155_19	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_20	phrog_9	251.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0007155_20	UniRef90_A0A4R3JPR8	904.0	0	Phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-0007155_20	610130.Closa_0741	902.0	0	Phage Terminase	N/A
Pfam	UHGV-0007155_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0007155_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0007155_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0007155_20	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_21	phrog_5110	112.7	1.6e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0007155_21	UniRef90_UPI001D57FD6D	121.0	1.69e-33	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0007155_21	349161.Dred_2608	117.0	1.02e-32	N/A	N/A
Pfam	UHGV-0007155_21	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0007155_21	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_22	phrog_36	86.7	2.5e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-0007155_22	UniRef90_UPI001CD68077	102.0	4.83e-25	N/A	N/A
eggNOG-mapper	UHGV-0007155_22	1235800.C819_02243	67.0	0.00000000000489	N/A	N/A
Pfam	UHGV-0007155_22	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0007155_22	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_23	phrog_30258	108.7	3e-32	N/A	unknown function
structural_annotation	UHGV-0007155_25	PF09723,TIGR02605,COG1996	N/A	N/A	N/A	N/A
UniRef90	UHGV-0007155_26	UniRef90_L1Q0F3	110.0	1.23e-28	DNA-binding helix-turn-helix protein	N/A
UniRef90	UHGV-0007155_29	UniRef90_D4MVM1	234.0	0	Transposase	N/A
Pfam	UHGV-0007155_29	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
Pfam	UHGV-0007155_29	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
structural_annotation	UHGV-0007155_29	PF01710,NF040595,COG3415	N/A	N/A	N/A	N/A
KOfam	UHGV-0007155_31	K03111	110.7	2.3e-32	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0007155_31	phrog_44	114.2	1.3e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007155_31	UniRef90_A0A174C0A5	203.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0007155_31	411474.COPEUT_01783	149.0	7.00649e-45	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0007155_31	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0007155_31	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0007155_31	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0007155_31	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
KOfam	UHGV-0007155_32	K03497	75.0	1.4e-21	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0007155_32	phrog_15982	306.0	0	N/A	unknown function
UniRef90	UHGV-0007155_32	UniRef90_A0A417V0R1	805.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007155_32	1232453.BAIF02000028_gene2716	267.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0007155_32	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0007155_32	PF12961	N/A	N/A	N/A	DUF3850
COG	UHGV-0007155_32	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0007155_32	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
KOfam	UHGV-0007155_33	K03496	185.0	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0007155_33	phrog_164	162.8	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007155_33	UniRef90_A0A174C0J7	426.0	0	Sporulation initiation inhibitor protein soj	N/A
eggNOG-mapper	UHGV-0007155_33	411470.RUMGNA_00210	180.0	0	CobQ CobB MinD ParA nucleotide binding domain protein	N/A
Pfam	UHGV-0007155_33	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0007155_33	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0007155_33	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0007155_35	PF14084	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_36	phrog_824	138.1	2.70002e-41	N/A	unknown function
UniRef90	UHGV-0007155_36	UniRef90_A0A5B3G7E5	285.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0007155_36	610130.Closa_0716	148.0	8.96831e-44	VRR_NUC	N/A
Pfam	UHGV-0007155_36	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-0007155_37	phrog_3584	141.4	5.70048e-42	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0007155_37	1196322.A370_05744	148.0	1.65998e-41	N/A	N/A
structural_annotation	UHGV-0007155_44	PF07875	N/A	N/A	N/A	N/A
KOfam	UHGV-0007155_45	K22300	61.4	2.1e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0007155_45	phrog_8	48.0	0.00000000000017	transcriptional regulator	transcription regulation
UniRef90	UHGV-0007155_45	UniRef90_UPI00156E4FED	207.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0007155_45	411470.RUMGNA_02181	126.0	9.04e-36	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0007155_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0007155_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0007155_47	phrog_3727	95.4	7.4e-28	N/A	unknown function
UniRef90	UHGV-0007155_47	UniRef90_UPI00034248C7	130.0	2.11e-34	glycosyl hydrolase lipoprotein	N/A
eggNOG-mapper	UHGV-0007155_47	1274524.BSONL12_08597	124.0	1.18e-32	N/A	N/A
structural_annotation	UHGV-0007155_47	PF16781,MF_00791,TIGR03780,COG2967	N/A	N/A	N/A	N/A
KOfam	UHGV-0007155_48	K06400	352.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0007155_48	phrog_95	345.0	0	integrase	integration and excision
UniRef90	UHGV-0007155_48	UniRef90_A0A415YC49	894.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0007155_48	411462.DORLON_00823	454.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0007155_48	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0007155_48	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0007155_48	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0007155_48	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0007155_48	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0007155_49	phrog_23452	238.9	0	N/A	unknown function
UniRef90	UHGV-0007155_49	UniRef90_A0A1Q2CB98	263.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0007155_49	1232447.BAHW02000009_gene383	243.0	0	Putative peptidoglycan binding domain	N/A
Pfam	UHGV-0007155_49	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0007155_49	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0007155_49	PF01471,COG3409	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0007155	Yes	38,155	40	100	1
UHGV-0006666	No	41,517	39	100	1
UHGV-0036268	No	39,009	39	100	1
UHGV-0041199	No	38,916	39	100	1
UHGV-0039015	No	38,869	40	100	1
UHGV-0021421	No	31,560	40	84	1
UHGV-0018547	No	30,944	40	83	1
UHGV-0005828	No	27,648	40	74	1
UHGV-0034295	No	21,051	40	56	1